RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 JAMLQ86YT9 394 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 BRSK1Q8TDC3 778 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 NUDT22Q9BRQ3 303 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 ASCL3Q9NQ33 180 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 PISDQ9UG56 409 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 FKBPLQ9UIM3 349 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 ZNF148Q9UQR1 794 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 LOXL2Q9Y4K0 774 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 PCDHGA8Q9Y5G5 932 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 SCN8AQ9UQD0 1980 aa16.4■□□□□ 0.22
SREBF1-219ENST00000580540 IGHV1OR21-1A0A087WYE8 117 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 DXOO77932 396 aaKnown RBP16.39■□□□□ 0.21
SREBF1-219ENST00000580540 PRAMEF1O95521 474 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 F3P13726 295 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 MPSTP25325 297 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 AKT1P31749 480 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 CA5AP35218 305 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 ERVPABLB-1P60509 514 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 ZFP36L1Q07352 338 aaKnown RBP16.39■□□□□ 0.21
SREBF1-219ENST00000580540 EIF3IQ13347 325 aaKnown RBP16.39■□□□□ 0.21
SREBF1-219ENST00000580540 P3H1Q32P28 736 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 GPRC6AQ5T6X5 926 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 DENND5AQ6IQ26 1287 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 TMEM220Q6QAJ8 160 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 ZNF547Q8IVP9 402 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 ZNF248Q8NDW4 579 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 OR13C4Q8NGS5 318 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 UBE2Q2Q8WVN8 375 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 PRR11Q96HE9 360 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-219ENST00000580540 ZCCHC2Q9C0B9 1178 aaKnown RBP16.39■□□□□ 0.21
SREBF1-219ENST00000580540 ASB8Q9H765 288 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 LRRC40Q9H9A6 602 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 GRPEL1Q9HAV7 217 aa16.39■□□□□ 0.21
SREBF1-219ENST00000580540 PIH1D1Q9NWS0 290 aaKnown RBP16.39■□□□□ 0.21
SREBF1-219ENST00000580540 DSPP15924 2871 aaKnown RBP16.39■□□□□ 0.21
SREBF1-219ENST00000580540 OR5K4A6NMS3 321 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 CCL22O00626 93 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 PSMD3O43242 534 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 LIASO43766 372 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 HOXB3P14651 431 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 VCLP18206 1134 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 MSH3P20585 1137 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 RPL10P27635 214 aaKnown RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 PBLDP30039 288 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 STIP1P31948 543 aaKnown RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 FASLGP48023 281 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 LMAN1P49257 510 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 CLCNKAP51800 687 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 PDE1BQ01064 536 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 SEPT6Q14141 434 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 NR1D2Q14995 579 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 DET1Q7L5Y6 550 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 SLITRK4Q8IW52 837 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 TRIM48Q8IWZ4 208 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 RASGEF1AQ8N9B8 481 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 RCBTB1Q8NDN9 531 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 OR10G6Q8NH81 332 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 DTX3LQ8TDB6 740 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 KCNE4Q8WWG9 221 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 SH3KBP1Q96B97 665 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 CRELD1Q96HD1 420 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 CMKLR1Q99788 373 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 TIMM29Q9BSF4 260 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 FRMD8P1Q9BZ68 369 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 FAM96AQ9H5X1 160 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 SARS2Q9NP81 518 aaKnown RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 AKAP7Q9P0M2 348 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 SCHIP1Q9P0W5 487 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 CPNE7Q9UBL6 633 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 FEZ2Q9UHY8 353 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-219ENST00000580540 PPP2R2CQ9Y2T4 447 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 ADAMTS20P59510 1910 aa16.38■□□□□ 0.21
SREBF1-219ENST00000580540 KIR2DS5A0A0G2JLQ3 304 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 A0A0G2JNG1 304 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 A6NCN8 305 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 OR2AG2A6NM03 316 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 KIR2DS3K7RE56 304 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 GAPDHSO14556 408 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-219ENST00000580540 POP7O75817 140 aaKnown RBP16.37■□□□□ 0.21
SREBF1-219ENST00000580540 SRP72O76094 671 aaKnown RBP16.37■□□□□ 0.21
SREBF1-219ENST00000580540 VIPP01282 170 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 ETS1P14921 441 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 ITIH1P19827 911 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 IDSP22304 550 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 CTSCP53634 463 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 MAPK10P53779 464 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 DRG2P55039 364 aaKnown RBP16.37■□□□□ 0.21
SREBF1-219ENST00000580540 POU6F1Q14863 301 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 KIR2DS5Q14953 304 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 SNAP47Q5SQN1 464 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-219ENST00000580540 KCTD11Q693B1 232 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 ZNF574Q6ZN55 896 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-219ENST00000580540 ZNF662Q6ZS27 426 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 PRUNE1Q86TP1 453 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 SPACA3Q8IXA5 215 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 DDHD1Q8NEL9 900 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 TRIM58Q8NG06 486 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 CCDC74BQ96LY2 380 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 ARNT2Q9HBZ2 717 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms