RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 MYOCQ99972 504 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CHID1Q9BWS9 393 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 OSBPL11Q9BXB4 747 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 NSUN3Q9H649 340 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CLK4Q9HAZ1 481 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 PCDH12Q9NPG4 1184 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 VPS45Q9NRW7 570 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 SYCE1LA8MT33 242 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 LDB2O43679 373 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 RSL1D1O76021 490 aaKnown RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 CPSF4O95639 269 aaKnown RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 ASLP04424 464 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 NTRK1P04629 796 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 ABCB1P08183 1280 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 GNA12Q03113 381 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 SPIDRQ14159 915 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 PERM1Q5SV97 790 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 ADGRG6Q86SQ4 1221 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 SYVN1Q86TM6 617 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 TMEM102Q8N9M5 508 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 EPS8L2Q9H6S3 715 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 LCTP09848 1927 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 FKBP9O95302 570 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 C1RP00736 705 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 OCM2P0CE71 109 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 OCMP0CE72 109 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 G6PDP11413 515 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 SLC7A1P30825 629 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 CORO1AP31146 461 aaKnown RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 AKT1P31749 480 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 MAGEA12P43365 314 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 SLC11A2P49281 568 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 FKBP9P1Q75LS8 142 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 MARVELD2Q8N4S9 558 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 ZBTB18Q99592 522 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 PNPLA3Q9NST1 481 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 PCDHB7Q9Y5E2 793 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 PRSS51A0A1B0GVH4 220 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 SLC7A4O43246 635 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 HSPA13P48723 471 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 POLR2JP52435 117 aaKnown RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 CHRNB3Q05901 458 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 CBX3Q13185 183 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 ITGADQ13349 1161 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 SIM2Q14190 667 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 GTDC1Q4AE62 458 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 PLEKHG4BQ96PX9 1271 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 CIPCQ9C0C6 399 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 CLPBQ9H078 707 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 TUBB1Q9H4B7 451 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 PALMDQ9NP74 551 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 FARSBQ9NSD9 589 aaKnown RBP13.53□□□□□ -0.24
NDEL1-204ENST00000578172 LMCD1Q9NZU5 365 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 DMTF1Q9Y222 760 aa13.53□□□□□ -0.24
NDEL1-204ENST00000578172 ZNF26P17031 533 aaPredicted RBP13.52□□□□□ -0.24
NDEL1-204ENST00000578172 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.24
NDEL1-204ENST00000578172 ATP5C1P36542 298 aaKnown RBP13.52□□□□□ -0.24
NDEL1-204ENST00000578172 LEPRP48357 1165 aaKnown RBP13.52□□□□□ -0.24
NDEL1-204ENST00000578172 FAM189BP81408 668 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 LCP2Q13094 533 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 MSANTD2Q6P1R3 559 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 TMEM173Q86WV6 379 aaPredicted RBP13.52□□□□□ -0.24
NDEL1-204ENST00000578172 SGCDQ92629 289 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 SLCO4A1Q96BD0 722 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 BOCQ9BWV1 1114 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 ACTR8Q9H981 624 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 CXorf21Q9HAI6 301 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 SELENONQ9NZV5 590 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 MAP10Q9P2G4 905 aa13.52□□□□□ -0.24
NDEL1-204ENST00000578172 ADAM12O43184 909 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 DUSP11O75319 330 aaKnown RBP13.52□□□□□ -0.25
NDEL1-204ENST00000578172 PKMP14618 531 aaKnown RBP13.52□□□□□ -0.25
NDEL1-204ENST00000578172 CYP2C18P33260 490 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 ANKDD1AQ495B1 522 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 CMPK2Q5EBM0 449 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 TAS1R1Q7RTX1 841 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
NDEL1-204ENST00000578172 SEPT3Q9UH03 358 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 TARM1B6A8C7 271 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 PFDN6O15212 129 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 TBL1XO60907 577 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 B3GALT4O96024 378 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 IL5RAQ01344 420 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 FAM174BQ3ZCQ3 159 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 NANOGNBQ7Z5D8 188 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 CCDC117Q8IWD4 279 aaPredicted RBP13.52□□□□□ -0.25
NDEL1-204ENST00000578172 OR56A4Q8NGH8 313 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 IRGQQ8WZA9 623 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 TSGA13Q96PP4 275 aa13.52□□□□□ -0.25
NDEL1-204ENST00000578172 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.25
NDEL1-204ENST00000578172 SH3BP5O60239 455 aa13.51□□□□□ -0.25
NDEL1-204ENST00000578172 CKMP06732 381 aa13.51□□□□□ -0.25
NDEL1-204ENST00000578172 ZNF182P17025 639 aaPredicted RBP13.51□□□□□ -0.25
NDEL1-204ENST00000578172 ADSLP30566 484 aaPredicted RBP13.51□□□□□ -0.25
NDEL1-204ENST00000578172 ADRA1AP35348 466 aa13.51□□□□□ -0.25
NDEL1-204ENST00000578172 SGSHP51688 502 aa13.51□□□□□ -0.25
NDEL1-204ENST00000578172 MERTKQ12866 999 aa13.51□□□□□ -0.25
NDEL1-204ENST00000578172 SELPLGQ14242 412 aa13.51□□□□□ -0.25
NDEL1-204ENST00000578172 C11orf74Q86VG3 221 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms