RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SARDHQ9UL12 918 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 APOBEC2Q9Y235 224 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 EIF3FO00303 357 aaPredicted RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 KPNA5O15131 536 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 SYNCRIPO60506 623 aaKnown RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 CCDC22O60826 627 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 ATP5HO75947 161 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 SLC25A14O95258 325 aaPredicted RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 ADH1BP00325 375 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 KITP10721 976 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 ADRB3P13945 408 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 ALOX15P16050 662 aaPredicted RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 AQP5P55064 265 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 GALNT1Q10472 559 aaPredicted RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 ADGRE1Q14246 886 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 POM121L1PQ3SYA9 428 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 TMEM52BQ4KMG9 183 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 LDLRAP1Q5SW96 308 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 NAIF1Q69YI7 327 aaPredicted RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 TXNDC11Q6PKC3 985 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 NAPRTQ6XQN6 538 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 Q6ZVL8 140 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 CHPFQ8IZ52 775 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 MYO1HQ8N1T3 1032 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 ZBTB2Q8N680 514 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 ZNF513Q8N8E2 541 aaPredicted RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 PTERQ96BW5 349 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 FAM136AQ96C01 138 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 L3HYPDHQ96EM0 354 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 FAR2Q96K12 515 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 VPS35Q96QK1 796 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 TUBB6Q9BUF5 446 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 BOCQ9BWV1 1114 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 ZNF395Q9H8N7 513 aaPredicted RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 DNAJC28Q9NX36 388 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 CACNA2D2Q9NY47 1150 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 PIEZO1Q92508 2521 aa13.63□□□□□ -0.23
TPM1-215ENST00000558868 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
TPM1-215ENST00000558868 SUPT3HB4E1H0 165 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 BTN3A1O00481 513 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 NEMP1O14524 444 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 AREL1O15033 823 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 GPR39O43194 453 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 SUPT3HO75486 399 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 TRIM16O95361 564 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 ENO3P13929 434 aaPredicted RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 MSH3P20585 1137 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 AKT1P31749 480 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 ETV3P41162 512 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 PSMD8P48556 350 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 LIG3P49916 1009 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 RPL14P50914 215 aaKnown RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 HERVK_113P63132 956 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 SMAD4Q13485 552 aaKnown RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 CAMK2GQ13555 558 aaPredicted RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 OR4D1Q15615 310 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 GALNTL6Q49A17 601 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 ARL13AQ5H913 290 aaPredicted RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 GPRC6AQ5T6X5 926 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 HENMT1Q5T8I9 393 aaKnown RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 TRMT11Q7Z4G4 463 aaKnown RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 ADAMTSL2Q86TH1 951 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 NLRP8Q86W28 1048 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 RALGPS2Q86X27 583 aaPredicted RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 GPSM1Q86YR5 675 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 MMAAQ8IVH4 418 aaKnown RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 SFTPA1Q8IWL2 248 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 CPNE9Q8IYJ1 553 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 FBXO39Q8N4B4 442 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 FITM2Q8N6M3 262 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 DDHD1Q8NEL9 900 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 CXorf40AQ8TE69 158 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 EEF1AKMT1Q8WVE0 214 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 STON2Q8WXE9 905 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 DNASE1L2Q92874 299 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 AP2M1Q96CW1 435 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 DTD2Q96FN9 168 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 COQ10AQ96MF6 247 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 RILPQ96NA2 401 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 ATOH8Q96SQ7 321 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 RIOK2Q9BVS4 552 aaKnown RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 ERVK-6Q9BXR3 956 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 RSPH9Q9H1X1 276 aaPredicted RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 ABCG8Q9H221 673 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 HEY2Q9UBP5 337 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 MARCOQ9UEW3 520 aaPredicted RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 CD84Q9UIB8 345 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 ZFP69BQ9UJL9 534 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 RRP15Q9Y3B9 282 aaKnown RBP13.62□□□□□ -0.23
TPM1-215ENST00000558868 CDH23Q9H251 3354 aa13.62□□□□□ -0.23
TPM1-215ENST00000558868 SPECC1L-ADORA2AF8WAN1 911 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 STX16-NPEPL1H3BU86 382 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 STX16O14662 325 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 LZTS3O60299 673 aaPredicted RBP13.61□□□□□ -0.23
TPM1-215ENST00000558868 UBOX5O94941 541 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 TSPAN12O95859 305 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 S100BP04271 92 aaPredicted RBP13.61□□□□□ -0.23
TPM1-215ENST00000558868 GFAPP14136 432 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 ATP1B2P14415 290 aaPredicted RBP13.61□□□□□ -0.23
TPM1-215ENST00000558868 DRD1P21728 446 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms