RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TEX38Q6PEX7 206 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 FJX1Q86VR8 437 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 ZNF34Q8IZ26 560 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 CLIP4Q8N3C7 705 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 GCSAMQ8N6F7 178 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 CLEC18CQ8NCF0 446 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 RBM15BQ8NDT2 890 aaKnown RBP6.23□□□□□ -1.41
LEMD3-206ENST00000545026 OR5R1Q8NH85 324 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 TAS1R2Q8TE23 839 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 ERVMER34-1Q9H9K5 563 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 MCM9Q9NXL9 1143 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 KLHL20Q9Y2M5 609 aa6.23□□□□□ -1.41
LEMD3-206ENST00000545026 A0A1W2PP11 408 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 URADA6NGE7 173 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 J3QR06 171 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 CLGNO14967 610 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 GGPS1O95749 300 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 GLULP15104 373 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 HOXA11P31270 313 aaPredicted RBP6.22□□□□□ -1.41
LEMD3-206ENST00000545026 CBWD6Q4V339 395 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 XKR9Q5GH70 373 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 CBWD3Q5JTY5 395 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 KRT80Q6KB66 452 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 ZNF534Q76KX8 674 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 GLCCI1Q86VQ1 547 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 GALNT13Q8IUC8 556 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 TC2NQ8N9U0 490 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 Q8NFD4 153 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 OR10S1Q8NGN2 331 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 UTP15Q8TED0 518 aaKnown RBP6.22□□□□□ -1.41
LEMD3-206ENST00000545026 VPS33AQ96AX1 596 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 SLC22A12Q96S37 553 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 MTERF1Q99551 399 aaKnown RBP6.22□□□□□ -1.41
LEMD3-206ENST00000545026 GPR88Q9GZN0 384 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 CHMP1AQ9HD42 196 aaPredicted RBP6.22□□□□□ -1.41
LEMD3-206ENST00000545026 PCDHA7Q9UN72 937 aa6.22□□□□□ -1.41
LEMD3-206ENST00000545026 ASTN2O75129 1339 aaPredicted RBP6.22□□□□□ -1.41
LEMD3-206ENST00000545026 CD8B2A6NJW9 211 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 TMEM189-UBE2V1I3L0A0 370 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 NDUFS4O43181 175 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 CLDN14O95500 239 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 KCNA5P22460 613 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 TRAF2Q12933 501 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 UBE2V1Q13404 147 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 PLCB4Q15147 1175 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 SNAPC1Q16533 368 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 TMEM211Q6ICI0 200 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 CAMKMTQ7Z624 323 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 GPR180Q86V85 440 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 VSIG1Q86XK7 387 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 PM20D2Q8IYS1 436 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 OR6J1Q8NGC5 347 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 SPATA22Q8NHS9 363 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 CFAP61Q8NHU2 1237 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 THAP6Q8TBB0 222 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 SLC44A1Q8WWI5 657 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 ZNF653Q96CK0 615 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 RMDN1Q96DB5 314 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 SCMH1Q96GD3 660 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 GOLPH3LQ9H4A5 285 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 SH3GLB2Q9NR46 395 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 OLAHQ9NV23 265 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 HAO2Q9NYQ3 351 aa6.21□□□□□ -1.42
LEMD3-206ENST00000545026 TTC3P53804 2025 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 H0YIN7 160 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 SPRY1O43609 319 aaPredicted RBP6.2□□□□□ -1.42
LEMD3-206ENST00000545026 HSPA4LO95757 839 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 VPREB1P12018 145 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 CORO1AP31146 461 aaKnown RBP6.2□□□□□ -1.42
LEMD3-206ENST00000545026 KCNJ4P48050 445 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 CDH13P55290 713 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 ROR1Q01973 937 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 NFATC4Q14934 902 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 LETM2Q2VYF4 491 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 ZDHHC20Q5W0Z9 365 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 ZNF549Q6P9A3 640 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 RBPMS2Q6ZRY4 209 aaKnown RBP6.2□□□□□ -1.42
LEMD3-206ENST00000545026 SLFN11Q7Z7L1 901 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 ANKRD23Q86SG2 305 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 ZNF114Q8NC26 417 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 TSPAN14Q8NG11 270 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 TBC1D16Q8TBP0 767 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 DNAAF4Q8WXU2 420 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 C3orf30Q96M34 536 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 ZNF830Q96NB3 372 aaPredicted RBP6.2□□□□□ -1.42
LEMD3-206ENST00000545026 MRPL44Q9H9J2 332 aaKnown RBP6.2□□□□□ -1.42
LEMD3-206ENST00000545026 RCC2Q9P258 522 aaKnown RBP6.2□□□□□ -1.42
LEMD3-206ENST00000545026 OSGIN1Q9UJX0 560 aa6.2□□□□□ -1.42
LEMD3-206ENST00000545026 MID1O15344 667 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 ZBTB43O43298 467 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 TADA2AO75478 443 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 KDM4BO94953 1096 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 C22orf31O95567 290 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 ZNF12P17014 697 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 GJA1P17302 382 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 S1PR1P21453 382 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 MC5RP33032 325 aa6.19□□□□□ -1.42
LEMD3-206ENST00000545026 ZNF41P51814 821 aaPredicted RBP6.19□□□□□ -1.42
LEMD3-206ENST00000545026 PDE1BQ01064 536 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms