RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 DLGAP2Q9P1A6 1054 aa12.61□□□□□ -0.39
TRAF4-208ENST00000469529 CD84Q9UIB8 345 aa12.61□□□□□ -0.39
TRAF4-208ENST00000469529 ADAM21Q9UKJ8 722 aa12.61□□□□□ -0.39
TRAF4-208ENST00000469529 GPR34Q9UPC5 381 aa12.61□□□□□ -0.39
TRAF4-208ENST00000469529 HS3ST3A1Q9Y663 406 aa12.61□□□□□ -0.39
TRAF4-208ENST00000469529 DNMT3AQ9Y6K1 912 aaPredicted RBP12.61□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3DA0A087WVF3 549 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3IA0A087WXS9 549 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3EA0A087X179 549 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3KA0A087X1G2 549 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 CCDC163A0A0D9SF12 145 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 A0A1W2PQU0 124 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3FA6NER0 549 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3LB9A6J9 549 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 PI15O43692 258 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 VEGFDO43915 354 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 RNGTTO60942 597 aaKnown RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 APOA4P06727 396 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 OR56A5P0C7T3 313 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3HP0C7X1 549 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 AOC1P19801 751 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 RPA3P35244 121 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 ABCG1P45844 678 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 GPR1P46091 355 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 CLCN7P51798 805 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 WDR4P57081 412 aaKnown RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TMEM115Q12893 351 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 FGL2Q14314 439 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 ACAP2Q15057 778 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 SMAD1Q15797 465 aaKnown RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 FAM83EQ2M2I3 478 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 AGAP9Q5VTM2 703 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3GQ6DHY5 549 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3CQ6IPX1 549 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 CDHR3Q6ZTQ4 885 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 MICALCLQ6ZW33 695 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 CMC1Q7Z7K0 106 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 PHYKPLQ8IUZ5 450 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 SLC41A1Q8IVJ1 513 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D3Q8IZP1 549 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TMEM151AQ8N4L1 468 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 NKAPQ8N5F7 415 aaKnown RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 TP53I13Q8NBR0 393 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 HMGB4Q8WW32 186 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 INPP5DQ92835 1189 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 DCUN1D1Q96GG9 259 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 HIC2Q96JB3 615 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 LINC00615Q96LM1 132 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 PANX3Q96QZ0 392 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 SLC13A1Q9BZW2 595 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 SLC6A17Q9H1V8 727 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 CAB39LQ9H9S4 337 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 GPAMQ9HCL2 828 aa12.6□□□□□ -0.39
TRAF4-208ENST00000469529 SPATS2LQ9NUQ6 558 aaKnown RBP12.6□□□□□ -0.39
TRAF4-208ENST00000469529 C17orf113A0A1B0GUU1 675 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 UBA6A0AVT1 1052 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 KLHL33A6NCF5 533 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 TARM1B6A8C7 271 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 GOLGA8RI6L899 631 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 CHUKO15111 745 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 BIRC5O15392 142 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 SGTAO43765 313 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 PLIN3O60664 434 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 MAGEC1O60732 1142 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 SLC25A14O95258 325 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 PAK4O96013 591 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 LTA4HP09960 611 aaKnown RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 CBSLP0DN79 551 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 CHN1P15882 459 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 MSH3P20585 1137 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 ACSL1P33121 698 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 CBSP35520 551 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 CXCL12P48061 93 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 KPNA2P52292 529 aaKnown RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 ATP6V0D1P61421 351 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 GBX1Q14549 363 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 BCL7AQ4VC05 210 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 SEL1L3Q68CR1 1132 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 PTRHD1Q6GMV3 140 aaKnown RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 TMEM207Q6UWW9 146 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 KIAA1324Q6UXG2 1013 aaKnown RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 RGS9BPQ6ZS82 235 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 RAPH1Q70E73 1250 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 CENPLQ8N0S6 344 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 RHEBL1Q8TAI7 183 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 FAM174AQ8TBP5 190 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 RDH11Q8TC12 318 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 ATXN7L3BQ96GX2 97 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 NDNQ99608 321 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 BOCQ9BWV1 1114 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 TSSK1BQ9BXA7 367 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 ZCCHC2Q9C0B9 1178 aaKnown RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 DERL2Q9GZP9 239 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 IRF2BPLQ9H1B7 796 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 TFB2MQ9H5Q4 396 aaKnown RBP12.59□□□□□ -0.39
TRAF4-208ENST00000469529 NMRAL1Q9HBL8 299 aa12.59□□□□□ -0.39
TRAF4-208ENST00000469529 IGSF5Q9NSI5 407 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms