RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PLXNB2O15031 1838 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 MTMR11A4FU01 709 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 HHLA1C9JL84 531 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 SRP72O76094 671 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 EPN2O95208 641 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 PCNAP12004 261 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 CTRB1P17538 263 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 SLC9A3P48764 834 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 CDKN1CP49918 316 aaPredicted RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 CHRNEQ04844 493 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 PCBP1Q15365 356 aaKnown RBP eCLIP12.24□□□□□ -0.45
USP11-206ENST00000469080 LSM12Q3MHD2 195 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 SEL1L3Q68CR1 1132 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 CTRB2Q6GPI1 263 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 PKN3Q6P5Z2 889 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 LINC00523Q86TU6 105 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 LINC01599Q8WXQ3 324 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 SGCDQ92629 289 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 NPAS2Q99743 824 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 NAT9Q9BTE0 207 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 IER2Q9BTL4 223 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 STN1Q9H668 368 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 UGT2A1Q9Y4X1 527 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 USP3Q9Y6I4 520 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 ZNF638Q14966 1978 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 PLXNA1Q9UIW2 1896 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 PARP14Q460N5 1801 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 K7ERQ8 282 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 MTSS1O43312 755 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 MAFKO60675 156 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 TBL1XO60907 577 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 KLHL2O95198 593 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 JUNP05412 331 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 SERPINF2P08697 491 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 CDH1P12830 882 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 HOXD8P13378 290 aaPredicted RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 PRDX6P30041 224 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 BMPR1AP36894 532 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 ETV4P43268 484 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 COPAP53621 1224 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 POU6F2P78424 691 aaPredicted RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 MRPS22P82650 360 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 BFSP2Q13515 415 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 DSC3Q14574 896 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 VEPH1Q14D04 833 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 PON2Q15165 354 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 TRIM71Q2Q1W2 868 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 DET1Q7L5Y6 550 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 RELL1Q8IUW5 271 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 LSMEM2Q8N112 164 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 MZB1Q8WU39 189 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 TRUB1Q8WWH5 349 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 JADE3Q92613 823 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 TMEM79Q9BSE2 394 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 SLC2A11Q9BYW1 496 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 MOCS1Q9NZB8 636 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 PCM1Q15154 2024 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 H3BNX3 289 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 STX7O15400 261 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 RSL1D1O76021 490 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 KCNH1O95259 989 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 H6PDO95479 791 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 BCL10O95999 233 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 POLR2CP19387 275 aaPredicted RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 FGFR3P22607 806 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 KRT20P35900 424 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 SLC11A2P49281 568 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 LIMK2P53671 638 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 SLC18A2Q05940 514 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 CBX2Q14781 532 aaPredicted RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 OXA1LQ15070 435 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 GLT6D1Q7Z4J2 308 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 DCP2Q8IU60 420 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 TICAM1Q8IUC6 712 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 SAMD14Q8IZD0 417 aaPredicted RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 ZNF786Q8N393 782 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 RTL3Q8N8U3 475 aaKnown RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 ADAMTS16Q8TE57 1224 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 HTRA1Q92743 480 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 ALPK1Q96QP1 1244 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 EGFL8Q99944 293 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 HOXD1Q9GZZ0 328 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 PPCSQ9HAB8 311 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 ARMC1Q9NVT9 282 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 SLC8A2Q9UPR5 921 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 CAB39Q9Y376 341 aaPredicted RBP12.24□□□□□ -0.45
USP11-206ENST00000469080 SQORQ9Y6N5 450 aa12.24□□□□□ -0.45
USP11-206ENST00000469080 MATN3O15232 486 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 NDUFS2O75306 463 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 FKBP9O95302 570 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 C1RP00736 705 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 ALPIP09923 528 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 BMP1P13497 986 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 GALNT2Q10471 571 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 AGKQ53H12 422 aa12.23□□□□□ -0.45
USP11-206ENST00000469080 OGFRL1Q5TC84 451 aaPredicted RBP12.23□□□□□ -0.45
USP11-206ENST00000469080 TCAIMQ8N3R3 496 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms