RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 APPL2Q8NEU8 664 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 BPIFB1Q8TDL5 484 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 HTR3CQ8WXA8 447 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 LPAR1Q92633 364 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 TUBGCP3Q96CW5 907 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 TRMT61AQ96FX7 289 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 ZNF560Q96MR9 790 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 FAM96AQ9H5X1 160 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 CCDC177Q9NQR7 707 aaPredicted RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 PKD2L2Q9NZM6 624 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 ERVK-18Q9QC07 812 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 NME7Q9Y5B8 376 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 LAMA2P24043 3122 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 DDHD2O94830 711 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 LRIG2O94898 1065 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 ARIH2O95376 493 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 EIF2S1P05198 315 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 OR4Q2P0C623 313 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 POLR2EP19388 210 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 POU3F3P20264 500 aaPredicted RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 RFX2P48378 723 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 PPP5CP53041 499 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 POU6F2P78424 691 aaPredicted RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 BST2Q10589 180 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 LAMC2Q13753 1193 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 NOL9Q5SY16 702 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 C6orf141Q5SZD1 244 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 BROXQ5VW32 411 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 NAPEPLDQ6IQ20 393 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 LARP4Q71RC2 724 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 PAGE2Q7Z2X7 111 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 SZRD1Q7Z422 152 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 PHYKPLQ8IUZ5 450 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 BRSK2Q8IWQ3 736 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 BEST2Q8NFU1 509 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 PHF10Q8WUB8 498 aaKnown RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 NXNL1Q96CM4 212 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 ACOX2Q99424 681 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 TBCDQ9BTW9 1192 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 APOL5Q9BWW9 433 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 CXCL16Q9H2A7 254 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 MEAF6Q9HAF1 191 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 PAQR5Q9NXK6 330 aaPredicted RBP8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 FBXO5Q9UKT4 447 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 CACNA1CQ13936 2221 aa8.68□□□□□ -1.02
SMARCA1-203ENST00000371123 M0QX08 132 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 TPPPO94811 219 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 TOMM70O94826 608 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 ARF4P18085 180 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 WEE1P30291 646 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 GP5P40197 560 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 MVKQ03426 396 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 GRB7Q14451 532 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 DUSP7Q16829 419 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 DCAF4L1Q3SXM0 396 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 FAM205BPQ63HN1 556 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 WSCD1Q658N2 575 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 NCBP2-AS2Q69YL0 99 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 PIK3C3Q8NEB9 887 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 OR6J1Q8NGC5 347 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 FRS2Q8WU20 508 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 OSCP1Q8WVF1 389 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 PMEPA1Q969W9 287 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 VPS35Q96QK1 796 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 BARD1Q99728 777 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 ALG2Q9H553 416 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 NT5MQ9NPB1 228 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 H3BRB1 525 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 INPP4BO15327 924 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 CCNKO75909 580 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 NDST3O95803 873 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 GUCA1CO95843 209 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 KCNA2P16389 499 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 ATICP31939 592 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 EFNA5P52803 228 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 CRISP3P54108 245 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 FOXA1P55317 472 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 PPIL2Q13356 520 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 DDX39BQ13838 428 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 SMN1Q16637 294 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 FBXL6Q8N531 539 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 BMPERQ8N8U9 685 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 ANKRD52Q8NB46 1076 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 OR5H6Q8NGV6 325 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 ANGPTL6Q8NI99 470 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 TMEM125Q96AQ2 219 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 MTFMTQ96DP5 389 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 ULBP1Q9BZM6 244 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 OR2B2Q9GZK3 357 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 XPR1Q9UBH6 696 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 VANGL2Q9ULK5 521 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 PCDHGA10Q9Y5H3 936 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 OAS3Q9Y6K5 1087 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 U3KQV3 271 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 SHROOM3Q8TF72 1996 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 FKBP9O95302 570 aa8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 SNRPB2P08579 225 aaKnown RBP8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 ZNF143P52747 638 aaPredicted RBP8.67□□□□□ -1.02
SMARCA1-203ENST00000371123 LIMK1P53667 647 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms