RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 LAMB3Q13751 1172 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 DUSP6Q16828 381 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 USP41Q3LFD5 358 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZSCAN23Q3MJ62 389 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 C6orf141Q5SZD1 244 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 NUGGCQ68CJ6 796 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 CRELD2Q6UXH1 353 aaPredicted RBP5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 SFTPA2Q8IWL1 248 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 BEST2Q8NFU1 509 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 GPT2Q8TD30 523 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 SLC35F5Q8WV83 523 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 FAM151AQ8WW52 585 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 TEKT1Q969V4 418 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 OTULINQ96BN8 352 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 COQ8BQ96D53 544 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZG16BQ96DA0 208 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 ELMOD3Q96FG2 381 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 TMEM47Q9BQJ4 181 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 SRSF8Q9BRL6 282 aaKnown RBP5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 BICC1Q9H694 974 aaKnown RBP5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 PDE7BQ9NP56 450 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 NRIP3Q9NQ35 241 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 SETD4Q9NVD3 440 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 NENFQ9UMX5 172 aa5.7□□□□□ -1.5
RNU4-39P-201ENST00000362455 SPTBN5Q9NRC6 3674 aaKnown RBP5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 CGB1A6NKQ9 187 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 CDRT15L2A8MXV6 281 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 CXCL11O14625 94 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 ENTPD3O75355 529 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 MTA2O94776 668 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 NR2F1P10589 423 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 RRM1P23921 792 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 CAMPP49913 170 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 MRPL12P52815 198 aaKnown RBP5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 IRX6P78412 446 aaPredicted RBP5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 TCP10Q12799 353 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 NAE1Q13564 534 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 CDONQ4KMG0 1287 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 Q5PR19 223 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 SLC16A12Q6ZSM3 486 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 SEPT14Q6ZU15 432 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 Q7L0L9 218 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 LINGO2Q7L985 606 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 ATG9AQ7Z3C6 839 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 MB21D2Q8IYB1 491 aaPredicted RBP5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 SCML4Q8N228 414 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 RAET1EQ8TD07 263 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 SAT2Q96F10 170 aaPredicted RBP5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 SLC41A2Q96JW4 573 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZFYVE19Q96K21 471 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZNF570Q96NI8 536 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 DEFB118Q96PH6 123 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 FAM110AQ9BQ89 295 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 TRMOQ9BU70 441 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 CISD1Q9NZ45 108 aaKnown RBP5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 OGFRQ9NZT2 677 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 NFE2L3Q9Y4A8 694 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 MAU2Q9Y6X3 613 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 MROH5Q6ZUA9 1318 aa5.69□□□□□ -1.5
RNU4-39P-201ENST00000362455 RPAP1Q9BWH6 1393 aaPredicted RBP5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 TMEM272A0A1B0GTI8 110 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 A8MV72 311 aaPredicted RBP5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 CTDSP2O14595 271 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 HS6ST1O60243 411 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 NDUFB8O95169 186 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 TUBBP07437 444 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 TMEM11P17152 192 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 IL11P20809 199 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 MYF6P23409 242 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 CHATP28329 748 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 HOXD10P28358 340 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 SLC15A1P46059 708 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 SELENOVP59797 346 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 SRSF4Q08170 494 aaKnown RBP5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 LRMPQ12912 555 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 IKQ13123 557 aaPredicted RBP5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 TRIP6Q15654 476 aaKnown RBP5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 NAB2Q15742 525 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 C2orf68Q2NKX9 166 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 PATL1Q86TB9 770 aaKnown RBP5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 WDR63Q8IWG1 891 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 POC5Q8NA72 575 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 OR14L1PQ8NHC6 308 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 TMEM163Q8TC26 289 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 INPP5DQ92835 1189 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 ERGIC1Q969X5 290 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 VCPIP1Q96JH7 1222 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 PPP1R13BQ96KQ4 1090 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 OR2A14Q96R47 310 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 GFM1Q96RP9 751 aaKnown RBP5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 PLK3Q9H4B4 646 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 SLC28A3Q9HAS3 691 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 FZD3Q9NPG1 666 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 DECR2Q9NUI1 292 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 HEY2Q9UBP5 337 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 RAI2Q9Y5P3 530 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZHX2Q9Y6X8 837 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZSWIM8A7E2V4 1837 aa5.68□□□□□ -1.5
RNU4-39P-201ENST00000362455 VCANP13611 3396 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms