RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 SIX5Q8N196 739 aa18.39■□□□□ 0.54
CLN3-206ENST00000360019 SYNPOQ8N3V7 929 aa18.39■□□□□ 0.54
CLN3-206ENST00000360019 FOXQ1Q9C009 403 aa18.39■□□□□ 0.54
CLN3-206ENST00000360019 RABEP2Q9H5N1 569 aa18.39■□□□□ 0.54
CLN3-206ENST00000360019 SARS2Q9NP81 518 aaKnown RBP18.39■□□□□ 0.54
CLN3-206ENST00000360019 COPG2Q9UBF2 871 aa18.39■□□□□ 0.54
CLN3-206ENST00000360019 XPR1Q9UBH6 696 aa18.39■□□□□ 0.54
CLN3-206ENST00000360019 TRMT6Q9UJA5 497 aaKnown RBP18.39■□□□□ 0.54
CLN3-206ENST00000360019 FZD4Q9ULV1 537 aa18.39■□□□□ 0.54
CLN3-206ENST00000360019 PIKFYVEQ9Y2I7 2098 aa18.39■□□□□ 0.54
CLN3-206ENST00000360019 KANSL1LA0AUZ9 987 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 GMNCA6NCL1 334 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 SRRM3A6NNA2 597 aaPredicted RBP18.39■□□□□ 0.53
CLN3-206ENST00000360019 CHURC1-FNTBB4DL54 471 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 TCP11X1B4DZS4 312 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 TARM1B6A8C7 271 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 H3BMM5 538 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 INPP4BO15327 924 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 ACADMP11310 421 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 ITGB6P18564 788 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 AKT1P31749 480 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 FGL2Q14314 439 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 LRRC32Q14392 662 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 AGAP9Q5VTM2 703 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 RAET1GQ6H3X3 334 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 RGS9BPQ6ZS82 235 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 USP30Q70CQ3 517 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 DET1Q7L5Y6 550 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 SCYL1Q96KG9 808 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 OSBPL6Q9BZF3 934 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 EPN3Q9H201 632 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 SYTL2Q9HCH5 934 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 SIRPGQ9P1W8 387 aa18.39■□□□□ 0.53
CLN3-206ENST00000360019 MRPS17Q9Y2R5 130 aaKnown RBP18.39■□□□□ 0.53
CLN3-206ENST00000360019 G3V2L1 256 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 TSPAN12O95859 305 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 ATP1B2P14415 290 aaPredicted RBP18.38■□□□□ 0.53
CLN3-206ENST00000360019 CD1DP15813 335 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 KCNA4P22459 653 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 SKIV2L2P42285 1042 aaKnown RBP18.38■□□□□ 0.53
CLN3-206ENST00000360019 GPR1P46091 355 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 TECRLQ5HYJ1 363 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 LDLRAP1Q5SW96 308 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 SYT13Q7L8C5 426 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 KBTBD6Q86V97 674 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 PLA2G15Q8NCC3 412 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 ZNF75CPQ92670 426 aaPredicted RBP18.38■□□□□ 0.53
CLN3-206ENST00000360019 CHMP6Q96FZ7 201 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 SHDQ96IW2 340 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 DHRS7Q9Y394 339 aa18.38■□□□□ 0.53
CLN3-206ENST00000360019 PRR23AA6NEV1 266 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 BIRC5O15392 142 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 SGTAO43765 313 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 SLC25A14O95258 325 aaPredicted RBP18.37■□□□□ 0.53
CLN3-206ENST00000360019 TRIM16O95361 564 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 CPA3P15088 417 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 BGNP21810 368 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 ALDH3A1P30838 453 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 RPS21P63220 83 aaKnown RBP18.37■□□□□ 0.53
CLN3-206ENST00000360019 ACAP2Q15057 778 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 AGERQ15109 404 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 WSCD2Q2TBF2 565 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 TMEM259Q4ZIN3 620 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 TRIM67Q6ZTA4 783 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 ISCA2Q86U28 154 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 FAM124AQ86V42 546 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 PHYKPLQ8IUZ5 450 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 C10orf107Q8IVU9 208 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 CPNE9Q8IYJ1 553 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 LRRC34Q8IZ02 419 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 LRRC8CQ8TDW0 803 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 HMGB4Q8WW32 186 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 PTERQ96BW5 349 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 SGF29Q96ES7 293 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 DCUN1D1Q96GG9 259 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 MRPL57Q9BQC6 102 aaKnown RBP18.37■□□□□ 0.53
CLN3-206ENST00000360019 MRPL46Q9H2W6 279 aaKnown RBP18.37■□□□□ 0.53
CLN3-206ENST00000360019 DOCK9Q9BZ29 2069 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 A0A1W2PQU0 124 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 FAM170BA6NMN3 283 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 ZBTB14O43829 449 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 APOA4P06727 396 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 TFEBP19484 476 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 MSH3P20585 1137 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 TPMTP51580 245 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 KPNA2P52292 529 aaKnown RBP18.37■□□□□ 0.53
CLN3-206ENST00000360019 DGKEP52429 567 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 CES4AQ5XG92 561 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 KIAA1161Q6NSJ0 714 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 UGT3A1Q6NUS8 523 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 NUDCD3Q8IVD9 361 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 C1QTNF2Q9BXJ5 285 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 MANSC1Q9H8J5 431 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 PREBQ9HCU5 417 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 POLMQ9NP87 494 aaPredicted RBP18.37■□□□□ 0.53
CLN3-206ENST00000360019 IKZF3Q9UKT9 509 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 NCKAP1Q9Y2A7 1128 aa18.37■□□□□ 0.53
CLN3-206ENST00000360019 CFAP99D6REC4 459 aa18.36■□□□□ 0.53
CLN3-206ENST00000360019 RNGTTO60942 597 aaKnown RBP18.36■□□□□ 0.53
CLN3-206ENST00000360019 PAK4O96013 591 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms