RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 RAB15P59190 212 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 TMEM115Q12893 351 aaPredicted RBP17.49■□□□□ 0.39
HDDC3-201ENST00000330334 NFATC2Q13469 925 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF648Q5T619 568 aaPredicted RBP17.49■□□□□ 0.39
HDDC3-201ENST00000330334 AGAP9Q5VTM2 703 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF761Q86XN6 746 aaPredicted RBP17.49■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF547Q8IVP9 402 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF843Q8N446 348 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 BMPERQ8N8U9 685 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 SGF29Q96ES7 293 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 TEFMQ96QE5 360 aaKnown RBP17.49■□□□□ 0.39
HDDC3-201ENST00000330334 HEMGNQ9BXL5 484 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 TMEM9Q9P0T7 183 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 PIEZO2Q9H5I5 2752 aa17.49■□□□□ 0.39
HDDC3-201ENST00000330334 SOWAHDA6NJG2 315 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF189O75820 626 aaPredicted RBP17.48■□□□□ 0.39
HDDC3-201ENST00000330334 ANXA9O76027 345 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 SLC4A1P02730 911 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 ITGB2P05107 769 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 MPSTP25325 297 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 CTNNA2P26232 953 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 ARSDP51689 593 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 INSCQ1MX18 579 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 KHDC1Q4VXA5 237 aaKnown RBP17.48■□□□□ 0.39
HDDC3-201ENST00000330334 MANEAQ5SRI9 462 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 C11orf96Q7Z7L8 435 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 PLXDC1Q8IUK5 500 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 RBM12BQ8IXT5 1001 aaKnown RBP17.48■□□□□ 0.39
HDDC3-201ENST00000330334 NCSTNQ92542 709 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 HAUS1Q96CS2 278 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 GBA3Q9H227 469 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 BPIFA1Q9NP55 256 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 FBXO8Q9NRD0 319 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 SLC39A1Q9NY26 324 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 RSPH14Q9UHP6 348 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 PKP3Q9Y446 797 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 DNMT3AQ9Y6K1 912 aaPredicted RBP17.48■□□□□ 0.39
HDDC3-201ENST00000330334 DUSP10Q9Y6W6 482 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF462Q96JM2 2506 aa17.48■□□□□ 0.39
HDDC3-201ENST00000330334 H7C0C1 242 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 AGRPO00253 132 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 PJA2O43164 708 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 VCLP18206 1134 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 IDSP22304 550 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 RBL1P28749 1068 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 SPAM1P38567 509 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 SLC19A1P41440 591 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 CHRNA4P43681 627 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 ATP5OP48047 213 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 GEMP55040 296 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 RWDD2BP57060 319 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 MC2RQ01718 297 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 LDLRAP1Q5SW96 308 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 DCAF12Q5T6F0 453 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 KIAA1614Q5VZ46 1190 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 ITPRIPL1Q6GPH6 555 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 CRTC3Q6UUV7 619 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 RANBP10Q6VN20 620 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 TMEM26Q6ZUK4 368 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 GLT6D1Q7Z4J2 308 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 SLC25A41Q8N5S1 370 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 ZSCAN1Q8NBB4 408 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 IPMKQ8NFU5 416 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 ACTL9Q8TC94 416 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 ART4Q93070 314 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 MED8Q96G25 268 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 C19orf43Q9BQ61 176 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 ZPBPQ9BS86 351 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 FSD1LQ9BXM9 530 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 OSBPL8Q9BZF1 889 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 ZCCHC2Q9C0B9 1178 aaKnown RBP17.47■□□□□ 0.39
HDDC3-201ENST00000330334 RBSNQ9H1K0 784 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 OSGEPL1Q9H4B0 414 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 OCIAD1Q9NX40 245 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 SCHIP1Q9P0W5 487 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-201ENST00000330334 ZNF624Q9P2J8 865 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-201ENST00000330334 AAR2Q9Y312 384 aaKnown RBP17.47■□□□□ 0.39
HDDC3-201ENST00000330334 REXO2Q9Y3B8 237 aaKnown RBP17.47■□□□□ 0.39
HDDC3-201ENST00000330334 B3GALT1Q9Y5Z6 326 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 COL6A6A6NMZ7 2263 aa17.47■□□□□ 0.39
HDDC3-201ENST00000330334 EFCAB7A8K855 629 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 TOX3O15405 576 aaPredicted RBP17.46■□□□□ 0.39
HDDC3-201ENST00000330334 MTX2O75431 263 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 TJP3O95049 919 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 VIPP01282 170 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 C9P02748 559 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 ANKRD34CP0C6C1 535 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 CETN2P41208 172 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 ATP1A2P50993 1020 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 DMPKQ09013 629 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 ITGA9Q13797 1035 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 GTF2H3Q13889 308 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 CHRNA6Q15825 494 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 CCDC181Q5TID7 509 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 CDKL3Q8IVW4 592 aaPredicted RBP17.46■□□□□ 0.39
HDDC3-201ENST00000330334 LRRC57Q8N9N7 239 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 DDHD1Q8NEL9 900 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 BLOC1S5Q8TDH9 187 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 NKD1Q969G9 470 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 TTC25Q96NG3 672 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms