RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	TY1A-LR3	P0CX75	440 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-ML2	P0CX76	440 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	SYP1	P25623	870 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	RPL8B	P29453	256 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	YEL1	P34225	687 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	1.91	□□□□□ -2.1	not detected
SMC4	YLR086W	NOP2	P40991	618 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	XKS1	P42826	600 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	1.91	□□□□□ -2.1	not detected
SMC4	YLR086W	SPO20	Q04359	397 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	POB3	Q04636	552 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	EST2	Q06163	884 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-GR1	Q12085	440 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-OL	Q92392	440 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	SBP1	P10080	294 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	PEP7	P32609	515 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	ERP6	P53198	216 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	UGO1	Q03327	502 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TAF8	Q03750	510 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	YDL176W	Q12027	708 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	PRP9	P19736	530 aa	Known RBP	1.9	□□□□□ -2.1
SMC4	YLR086W	YKR078W	P36158	585 aa	Known RBP	1.9	□□□□□ -2.1
SMC4	YLR086W	ENP1	P38333	483 aa	Known RBP	1.9	□□□□□ -2.1
SMC4	YLR086W	CEM1	P39525	442 aa		1.9	□□□□□ -2.1
SMC4	YLR086W	LSB6	P42951	607 aa		1.9	□□□□□ -2.1
SMC4	YLR086W	MON1	P53129	644 aa		1.9	□□□□□ -2.1
SMC4	YLR086W	RNH70	P53331	553 aa		1.9	□□□□□ -2.1
SMC4	YLR086W	TIF35	Q04067	274 aa	Known RBP	1.9	□□□□□ -2.1
SMC4	YLR086W	YDR444W	Q04093	687 aa		1.9	□□□□□ -2.1
SMC4	YLR086W	COG8	Q04632	607 aa		1.9	□□□□□ -2.1
SMC4	YLR086W	TDA5	Q06417	326 aa	Known RBP	1.9	□□□□□ -2.1
SMC4	YLR086W	NAR1	P23503	491 aa	Known RBP	1.9	□□□□□ -2.11
SMC4	YLR086W	SRP40	P32583	406 aa	Predicted RBP	1.9	□□□□□ -2.11
SMC4	YLR086W	STE5	P32917	917 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	PNT1	P38969	423 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	GIP2	P40036	548 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	RSM26	P47141	266 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	BUL2	Q03758	920 aa	Known RBP	1.9	□□□□□ -2.11
SMC4	YLR086W	YLR125W	Q12138	136 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	REC8	Q12188	680 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	YOR131C	Q12486	218 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	NNK1	P36003	928 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	SEA4	P38164	1038 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	GEM1	P39722	662 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	RSP5	P39940	809 aa	Known RBP	1.9	□□□□□ -2.11
SMC4	YLR086W	FLC1	Q08967	793 aa		1.9	□□□□□ -2.11
SMC4	YLR086W	MRP10	O75012	95 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	CIT1	P00890	479 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	THS1	P04801	734 aa	Known RBP	1.89	□□□□□ -2.11
SMC4	YLR086W	RAD4	P14736	754 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	MSH2	P25847	964 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	VBA5	P36172	582 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	YIR007W	P40566	764 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	SLS1	P42900	643 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	ADE12	P80210	433 aa	Known RBP	1.89	□□□□□ -2.11
SMC4	YLR086W	ROD1	Q02805	837 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	LAP2	Q10740	671 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	ELG1	Q12050	791 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	MDM12	Q92328	271 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	SAC7	P17121	654 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	GAL11	P19659	1081 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	HSP60	P19882	572 aa	Known RBP	1.89	□□□□□ -2.11
SMC4	YLR086W	RPC82	P32349	654 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	YKL069W	P36088	180 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	HSE1	P38753	452 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	PAN5	P38787	379 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	YKE2	P52553	114 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	HUL5	P53119	910 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	1.89	□□□□□ -2.11	not detected
SMC4	YLR086W	MRL1	Q06815	381 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	HBS1	P32769	611 aa	Known RBP	1.89	□□□□□ -2.11
SMC4	YLR086W	SIP5	P40210	489 aa	Known RBP	1.89	□□□□□ -2.11
SMC4	YLR086W	RRT14	P40470	206 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	NCE103	P53615	221 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	YPL066W	Q12194	479 aa		1.89	□□□□□ -2.11
SMC4	YLR086W	SMY2	P32909	740 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	YKL091C	P33324	310 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	YBR184W	P38299	523 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	MCX1	P38323	520 aa	Predicted RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	QNS1	P38795	714 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	ALT1	P52893	592 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	MAL11	P53048	616 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	CWC24	P53769	259 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	ORC3	P54790	616 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	1.88	□□□□□ -2.11	not detected
SMC4	YLR086W	YOR223W	Q12015	292 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	NHA1	Q99271	985 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	CAN1	P04817	590 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	MAE1	P36013	669 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	YAR028W	P39548	234 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	NUP82	P40368	713 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	ENV11	P53246	860 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	PEX13	P80667	386 aa		1.88	□□□□□ -2.11
SMC4	YLR086W	RSA3	Q05942	220 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	YOR059C	Q08448	450 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	CDC53	Q12018	815 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	FAL1	Q12099	399 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	SRO9	P25567	434 aa	Known RBP	1.88	□□□□□ -2.11
SMC4	YLR086W	YGR045C	P53229	120 aa		1.88	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms