RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 PCDHB11Q9Y5F2 797 aa6.71□□□□□ -1.34
CASC19-278ENST00000642088 GDF9O60383 454 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 DKK1O94907 266 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 NFATC2IPQ8NCF5 419 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 DOLKQ9UPQ8 538 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 GOLGA3Q08378 1498 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 ALDH1A1P00352 501 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 SCNN1AP37088 669 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 NBPF20Q3BBV1 942 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 PLEKHM2Q8IWE5 1019 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 ZNF784Q8NCA9 323 aaPredicted RBP6.7□□□□□ -1.34
CASC19-278ENST00000642088 CYLDQ9NQC7 956 aa6.7□□□□□ -1.34
CASC19-278ENST00000642088 CEP164Q9UPV0 1460 aa6.69□□□□□ -1.34
CASC19-278ENST00000642088 TMEM88BA6NKF7 163 aa6.69□□□□□ -1.34
CASC19-278ENST00000642088 ZBTB7BO15156 539 aaPredicted RBP6.69□□□□□ -1.34
CASC19-278ENST00000642088 ADH1CP00326 375 aa6.69□□□□□ -1.34
CASC19-278ENST00000642088 ADD1P35611 737 aaKnown RBP6.69□□□□□ -1.34
CASC19-278ENST00000642088 SOGA1O94964 1423 aa6.69□□□□□ -1.34
CASC19-278ENST00000642088 PTK7Q13308 1070 aa6.69□□□□□ -1.34
CASC19-278ENST00000642088 MAP4K5Q9Y4K4 846 aa6.69□□□□□ -1.34
CASC19-278ENST00000642088 PCDHGA11Q9Y5H2 935 aa6.69□□□□□ -1.34
CASC19-278ENST00000642088 LILRA1O75019 489 aa6.68□□□□□ -1.34
CASC19-278ENST00000642088 PPP1R26Q5T8A7 1209 aaPredicted RBP6.68□□□□□ -1.34
CASC19-278ENST00000642088 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
CASC19-278ENST00000642088 OGFOD1Q8N543 542 aa6.68□□□□□ -1.34
CASC19-278ENST00000642088 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
CASC19-278ENST00000642088 TNIKQ9UKE5 1360 aa6.68□□□□□ -1.34
CASC19-278ENST00000642088 RASA1P20936 1047 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 LAPTM4AQ15012 233 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 KDF1Q8NAX2 398 aaPredicted RBP6.67□□□□□ -1.34
CASC19-278ENST00000642088 LAMC3Q9Y6N6 1575 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 CUX1P39880 1505 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L15C9J2P7 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L10C9JJH3 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L13C9JLJ4 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L12C9JPN9 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L11C9JVI0 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L21D6R901 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L18D6R9N7 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L22D6RA61 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L17D6RBQ6 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L19D6RCP7 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L20D6RJB6 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 NRG2O14511 850 aaPredicted RBP6.67□□□□□ -1.34
CASC19-278ENST00000642088 FAM69CQ0P6D2 419 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 USP17L24Q0WX57 530 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 ITPKCQ96DU7 683 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 KLF16Q9BXK1 252 aaPredicted RBP6.67□□□□□ -1.34
CASC19-278ENST00000642088 OSBPL3Q9H4L5 887 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 CADPSQ9ULU8 1353 aa6.67□□□□□ -1.34
CASC19-278ENST00000642088 ERICH3Q5RHP9 1530 aa6.66□□□□□ -1.34
CASC19-278ENST00000642088 ATG7O95352 703 aa6.66□□□□□ -1.34
CASC19-278ENST00000642088 CBLBQ13191 982 aa6.66□□□□□ -1.34
CASC19-278ENST00000642088 ZFAND3Q9H8U3 227 aa6.66□□□□□ -1.34
CASC19-278ENST00000642088 TOR4AQ9NXH8 423 aa6.66□□□□□ -1.34
CASC19-278ENST00000642088 TTBK1Q5TCY1 1321 aaPredicted RBP6.66□□□□□ -1.34
CASC19-278ENST00000642088 PPP1R15AO75807 674 aaPredicted RBP6.65□□□□□ -1.34
CASC19-278ENST00000642088 SMPD1P17405 629 aa6.65□□□□□ -1.34
CASC19-278ENST00000642088 GTF2IP78347 998 aa6.65□□□□□ -1.34
CASC19-278ENST00000642088 NNTQ13423 1086 aa6.65□□□□□ -1.34
CASC19-278ENST00000642088 NOVA2Q9UNW9 492 aaKnown RBP6.65□□□□□ -1.34
CASC19-278ENST00000642088 PDZRN3Q9UPQ7 1066 aa6.65□□□□□ -1.34
CASC19-278ENST00000642088 SFI1A8K8P3 1242 aa6.65□□□□□ -1.35
CASC19-278ENST00000642088 MCCD1P59942 119 aaPredicted RBP6.65□□□□□ -1.35
CASC19-278ENST00000642088 ERVK-9P63128 1117 aa6.65□□□□□ -1.35
CASC19-278ENST00000642088 DPYDQ12882 1025 aa6.65□□□□□ -1.35
CASC19-278ENST00000642088 EML3Q32P44 896 aa6.65□□□□□ -1.35
CASC19-278ENST00000642088 MAP7D1Q3KQU3 841 aa6.65□□□□□ -1.35
CASC19-278ENST00000642088 CCDC116Q8IYX3 515 aa6.65□□□□□ -1.35
CASC19-278ENST00000642088 HPS1Q92902 700 aa6.65□□□□□ -1.35
CASC19-278ENST00000642088 RUSC2Q8N2Y8 1516 aa6.65□□□□□ -1.35
CASC19-278ENST00000642088 PRR20EP86478 221 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 PRR20CP86479 221 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 PRR20DP86480 221 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 PRR20BP86481 221 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 PRR20AP86496 221 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 RAB6BQ9NRW1 208 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 FAM196BA6NMK8 535 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 SEPT12Q8IYM1 358 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 TPCN2Q8NHX9 752 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 CEP162Q5TB80 1403 aa6.64□□□□□ -1.35
CASC19-278ENST00000642088 DNMBPQ6XZF7 1577 aa6.63□□□□□ -1.35
CASC19-278ENST00000642088 SCNN1DP51172 638 aa6.63□□□□□ -1.35
CASC19-278ENST00000642088 PHLDB3Q6NSJ2 640 aa6.63□□□□□ -1.35
CASC19-278ENST00000642088 MPNDQ8N594 471 aa6.63□□□□□ -1.35
CASC19-278ENST00000642088 AGBL1Q96MI9 1066 aa6.63□□□□□ -1.35
CASC19-278ENST00000642088 KIF27Q86VH2 1401 aa6.62□□□□□ -1.35
CASC19-278ENST00000642088 TMEM229AB2RXF0 380 aa6.62□□□□□ -1.35
CASC19-278ENST00000642088 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.62□□□□□ -1.35
CASC19-278ENST00000642088 SNIP1Q8TAD8 396 aaKnown RBP6.62□□□□□ -1.35
CASC19-278ENST00000642088 PURBQ96QR8 312 aaKnown RBP6.62□□□□□ -1.35
CASC19-278ENST00000642088 DNAAF2Q9NVR5 837 aaKnown RBP6.62□□□□□ -1.35
CASC19-278ENST00000642088 CDV3Q9UKY7 258 aaKnown RBP6.62□□□□□ -1.35
CASC19-278ENST00000642088 NOD1Q9Y239 953 aa6.62□□□□□ -1.35
CASC19-278ENST00000642088 RNF20Q5VTR2 975 aa6.62□□□□□ -1.35
CASC19-278ENST00000642088 CCDC102BQ68D86 513 aa6.62□□□□□ -1.35
CASC19-278ENST00000642088 TSEN2Q8NCE0 465 aaKnown RBP6.62□□□□□ -1.35
CASC19-278ENST00000642088 TTC24A2A3L6 582 aaPredicted RBP6.61□□□□□ -1.35
CASC19-278ENST00000642088 ATP5J2-PTCD1G3V325 749 aa6.61□□□□□ -1.35
CASC19-278ENST00000642088 TIMP2P16035 220 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms