RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 AMOTQ4VCS5 1084 aa22.99■■□□□ 1.27
PHGDH-230ENST00000641927 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.98■■□□□ 1.27
PHGDH-230ENST00000641927 THRAP3Q9Y2W1 955 aaKnown RBP22.97■■□□□ 1.27
PHGDH-230ENST00000641927 TRPC5Q9UL62 973 aaPredicted RBP22.97■■□□□ 1.27
PHGDH-230ENST00000641927 SPG7Q9UQ90 795 aa22.97■■□□□ 1.27
PHGDH-230ENST00000641927 ZBED9Q6R2W3 1325 aa22.96■■□□□ 1.27
PHGDH-230ENST00000641927 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
PHGDH-230ENST00000641927 ILDR1Q86SU0 546 aaPredicted RBP22.96■■□□□ 1.27
PHGDH-230ENST00000641927 NGEFQ8N5V2 710 aa22.96■■□□□ 1.27
PHGDH-230ENST00000641927 PARP4Q9UKK3 1724 aaKnown RBP22.96■■□□□ 1.27
PHGDH-230ENST00000641927 OVOS2A0A0G2JMS6 1433 aa22.95■■□□□ 1.26
PHGDH-230ENST00000641927 QTRT2Q9H974 415 aaKnown RBP22.93■■□□□ 1.26
PHGDH-230ENST00000641927 LMOD3Q0VAK6 560 aa22.93■■□□□ 1.26
PHGDH-230ENST00000641927 FAM98CQ17RN3 349 aaKnown RBP22.93■■□□□ 1.26
PHGDH-230ENST00000641927 C1orf141Q5JVX7 400 aa22.93■■□□□ 1.26
PHGDH-230ENST00000641927 ZCRB1Q8TBF4 217 aaKnown RBP22.93■■□□□ 1.26
PHGDH-230ENST00000641927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
PHGDH-230ENST00000641927 ZNF772Q68DY9 489 aaPredicted RBP22.92■■□□□ 1.26
PHGDH-230ENST00000641927 BARGINQ6ZT62 677 aa22.92■■□□□ 1.26
PHGDH-230ENST00000641927 WWC1Q8IX03 1113 aa22.92■■□□□ 1.26
PHGDH-230ENST00000641927 RTF1Q92541 710 aaKnown RBP22.92■■□□□ 1.26
PHGDH-230ENST00000641927 GJD4Q96KN9 370 aaPredicted RBP22.92■■□□□ 1.26
PHGDH-230ENST00000641927 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
PHGDH-230ENST00000641927 TRIM35Q9UPQ4 493 aa22.92■■□□□ 1.26
PHGDH-230ENST00000641927 PLEKHG2Q9H7P9 1386 aa22.92■■□□□ 1.26
PHGDH-230ENST00000641927 DLG5Q8TDM6 1919 aa22.91■■□□□ 1.26
PHGDH-230ENST00000641927 A0A0G2JS52 829 aa22.91■■□□□ 1.26
PHGDH-230ENST00000641927 GNAT3A8MTJ3 354 aa22.91■■□□□ 1.26
PHGDH-230ENST00000641927 MYT1Q01538 1121 aa22.91■■□□□ 1.26
PHGDH-230ENST00000641927 CCDC27Q2M243 656 aa22.91■■□□□ 1.26
PHGDH-230ENST00000641927 DISP2A7MBM2 1401 aa22.91■■□□□ 1.26
PHGDH-230ENST00000641927 ATRNO75882 1429 aa22.91■■□□□ 1.26
PHGDH-230ENST00000641927 MAP3K5Q99683 1374 aa22.9■■□□□ 1.26
PHGDH-230ENST00000641927 WNK3Q9BYP7 1800 aa22.9■■□□□ 1.26
PHGDH-230ENST00000641927 NCBP3Q53F19 620 aaKnown RBP22.9■■□□□ 1.26
PHGDH-230ENST00000641927 AKAP4Q5JQC9 854 aa22.9■■□□□ 1.26
PHGDH-230ENST00000641927 PKD1L3Q7Z443 1732 aa22.89■■□□□ 1.26
PHGDH-230ENST00000641927 PCDH11XQ9BZA7 1347 aa22.89■■□□□ 1.25
PHGDH-230ENST00000641927 PCDH11YQ9BZA8 1340 aa22.89■■□□□ 1.25
PHGDH-230ENST00000641927 EXOC5O00471 708 aa22.89■■□□□ 1.25
PHGDH-230ENST00000641927 DCTN1Q14203 1278 aa22.89■■□□□ 1.25
PHGDH-230ENST00000641927 DDX54Q8TDD1 881 aaKnown RBP22.89■■□□□ 1.25
PHGDH-230ENST00000641927 PHF23Q9BUL5 403 aaPredicted RBP22.89■■□□□ 1.25
PHGDH-230ENST00000641927 MCM10Q7L590 875 aa22.88■■□□□ 1.25
PHGDH-230ENST00000641927 IFNL2Q8IZJ0 200 aa22.88■■□□□ 1.25
PHGDH-230ENST00000641927 THUMPD2Q9BTF0 503 aaKnown RBP22.87■■□□□ 1.25
PHGDH-230ENST00000641927 PHKG2P15735 406 aa22.87■■□□□ 1.25
PHGDH-230ENST00000641927 DDB1Q16531 1140 aa22.87■■□□□ 1.25
PHGDH-230ENST00000641927 GLI3P10071 1580 aa22.86■■□□□ 1.25
PHGDH-230ENST00000641927 ZNF521Q96K83 1311 aa22.86■■□□□ 1.25
PHGDH-230ENST00000641927 CYP27B1O15528 508 aa22.86■■□□□ 1.25
PHGDH-230ENST00000641927 HTATSF1O43719 755 aaKnown RBP22.85■■□□□ 1.25
PHGDH-230ENST00000641927 GOLGA2Q08379 1002 aa22.85■■□□□ 1.25
PHGDH-230ENST00000641927 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
PHGDH-230ENST00000641927 TNS2Q63HR2 1409 aa22.84■■□□□ 1.25
PHGDH-230ENST00000641927 WDR63Q8IWG1 891 aa22.84■■□□□ 1.25
PHGDH-230ENST00000641927 CALD1Q05682 793 aaKnown RBP22.83■■□□□ 1.24
PHGDH-230ENST00000641927 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.24
PHGDH-230ENST00000641927 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
PHGDH-230ENST00000641927 IL17REQ8NFR9 667 aa22.82■■□□□ 1.24
PHGDH-230ENST00000641927 LRRC37A3O60309 1634 aa22.81■■□□□ 1.24
PHGDH-230ENST00000641927 SHANK3Q9BYB0 1731 aa22.81■■□□□ 1.24
PHGDH-230ENST00000641927 PDE3BQ13370 1112 aa22.81■■□□□ 1.24
PHGDH-230ENST00000641927 LGR6Q9HBX8 967 aa22.81■■□□□ 1.24
PHGDH-230ENST00000641927 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
PHGDH-230ENST00000641927 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
PHGDH-230ENST00000641927 RBM6P78332 1123 aaKnown RBP22.8■■□□□ 1.24
PHGDH-230ENST00000641927 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
PHGDH-230ENST00000641927 RGS17Q9UGC6 210 aaPredicted RBP22.79■■□□□ 1.24
PHGDH-230ENST00000641927 TEFQ10587 303 aa22.78■■□□□ 1.24
PHGDH-230ENST00000641927 SPINK5Q9NQ38 1064 aaPredicted RBP22.78■■□□□ 1.24
PHGDH-230ENST00000641927 THSD7AQ9UPZ6 1657 aa22.78■■□□□ 1.24
PHGDH-230ENST00000641927 E9PSI1 815 aa22.77■■□□□ 1.24
PHGDH-230ENST00000641927 SEPT12Q8IYM1 358 aa22.77■■□□□ 1.24
PHGDH-230ENST00000641927 KDM6AO15550 1401 aaPredicted RBP22.77■■□□□ 1.24
PHGDH-230ENST00000641927 ONECUT3O60422 494 aaPredicted RBP22.77■■□□□ 1.24
PHGDH-230ENST00000641927 RXRBP28702 533 aa22.77■■□□□ 1.24
PHGDH-230ENST00000641927 IL16Q14005 1332 aa22.77■■□□□ 1.23
PHGDH-230ENST00000641927 CEMIPQ8WUJ3 1361 aa22.76■■□□□ 1.23
PHGDH-230ENST00000641927 CENPBP07199 599 aaPredicted RBP22.76■■□□□ 1.23
PHGDH-230ENST00000641927 SLFN5Q08AF3 891 aa22.76■■□□□ 1.23
PHGDH-230ENST00000641927 MYH16Q9H6N6 1097 aa22.76■■□□□ 1.23
PHGDH-230ENST00000641927 NKX1-1Q15270 411 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-230ENST00000641927 GNAI1P63096 354 aa22.74■■□□□ 1.23
PHGDH-230ENST00000641927 MARCH10Q8NA82 808 aaPredicted RBP22.74■■□□□ 1.23
PHGDH-230ENST00000641927 IFT57Q9NWB7 429 aa22.74■■□□□ 1.23
PHGDH-230ENST00000641927 VIRMAQ69YN4 1812 aaKnown RBP22.74■■□□□ 1.23
PHGDH-230ENST00000641927 POTEAQ6S8J7 498 aa22.74■■□□□ 1.23
PHGDH-230ENST00000641927 SCN11AQ9UI33 1791 aa22.73■■□□□ 1.23
PHGDH-230ENST00000641927 TSR2Q969E8 191 aaKnown RBP22.73■■□□□ 1.23
PHGDH-230ENST00000641927 CFAP44Q96MT7 982 aa22.73■■□□□ 1.23
PHGDH-230ENST00000641927 MIS18AQ9NYP9 233 aa22.73■■□□□ 1.23
PHGDH-230ENST00000641927 CABP4P57796 275 aa22.72■■□□□ 1.23
PHGDH-230ENST00000641927 TAF7Q15545 349 aaPredicted RBP22.72■■□□□ 1.23
PHGDH-230ENST00000641927 SLC52A2Q9HAB3 445 aa22.71■■□□□ 1.23
PHGDH-230ENST00000641927 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
PHGDH-230ENST00000641927 FANCIQ9NVI1 1328 aa22.71■■□□□ 1.23
PHGDH-230ENST00000641927 DUSP27Q5VZP5 1158 aa22.71■■□□□ 1.23
PHGDH-230ENST00000641927 NFATC2IPQ8NCF5 419 aa22.71■■□□□ 1.23
PHGDH-230ENST00000641927 MBIPQ9NS73 344 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms