RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
HLA-B-258ENST00000640615 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
HLA-B-258ENST00000640615 NWD2Q9ULI1 1742 aa11.52□□□□□ -0.56
HLA-B-258ENST00000640615 TATP17735 454 aaPredicted RBP11.52□□□□□ -0.57
HLA-B-258ENST00000640615 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.57
HLA-B-258ENST00000640615 PLEKHO1Q53GL0 409 aaPredicted RBP11.52□□□□□ -0.57
HLA-B-258ENST00000640615 UNC5CLQ8IV45 518 aa11.52□□□□□ -0.57
HLA-B-258ENST00000640615 GAS2L2Q8NHY3 880 aa11.52□□□□□ -0.57
HLA-B-258ENST00000640615 GJD4Q96KN9 370 aaPredicted RBP11.52□□□□□ -0.57
HLA-B-258ENST00000640615 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.57
HLA-B-258ENST00000640615 CRB1P82279 1406 aa11.52□□□□□ -0.57
HLA-B-258ENST00000640615 NCAPD2Q15021 1401 aa11.52□□□□□ -0.57
HLA-B-258ENST00000640615 AMOTQ4VCS5 1084 aa11.51□□□□□ -0.57
HLA-B-258ENST00000640615 CENPBP07199 599 aaPredicted RBP11.5□□□□□ -0.57
HLA-B-258ENST00000640615 IL2RBP14784 551 aa11.5□□□□□ -0.57
HLA-B-258ENST00000640615 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
HLA-B-258ENST00000640615 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
HLA-B-258ENST00000640615 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
HLA-B-258ENST00000640615 RGPD2P0DJD1 1756 aa11.49□□□□□ -0.57
HLA-B-258ENST00000640615 BRWD3Q6RI45 1802 aa11.49□□□□□ -0.57
HLA-B-258ENST00000640615 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
HLA-B-258ENST00000640615 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
HLA-B-258ENST00000640615 TRIM35Q9UPQ4 493 aa11.49□□□□□ -0.57
HLA-B-258ENST00000640615 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
HLA-B-258ENST00000640615 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
HLA-B-258ENST00000640615 FAM208AQ9UK61 1670 aaKnown RBP11.49□□□□□ -0.57
HLA-B-258ENST00000640615 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
HLA-B-258ENST00000640615 PDE3BQ13370 1112 aa11.48□□□□□ -0.57
HLA-B-258ENST00000640615 ZNF530Q6P9A1 599 aaPredicted RBP11.48□□□□□ -0.57
HLA-B-258ENST00000640615 RTF1Q92541 710 aaKnown RBP11.48□□□□□ -0.57
HLA-B-258ENST00000640615 SPATA31A1Q5TZJ5 1347 aa11.48□□□□□ -0.57
HLA-B-258ENST00000640615 ZNF521Q96K83 1311 aa11.48□□□□□ -0.57
HLA-B-258ENST00000640615 MEGF6O75095 1541 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 SPATA31A5Q5VU36 1347 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 SPATA31A7Q8IWB4 1347 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 GNAT3A8MTJ3 354 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 DCTN1Q14203 1278 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 VPS72Q15906 364 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 C1orf141Q5JVX7 400 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 WDR63Q8IWG1 891 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 ZCRB1Q8TBF4 217 aaKnown RBP11.47□□□□□ -0.57
HLA-B-258ENST00000640615 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
HLA-B-258ENST00000640615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.57
HLA-B-258ENST00000640615 NRAPQ86VF7 1730 aa11.46□□□□□ -0.57
HLA-B-258ENST00000640615 HTATSF1O43719 755 aaKnown RBP11.46□□□□□ -0.57
HLA-B-258ENST00000640615 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.57
HLA-B-258ENST00000640615 MCM10Q7L590 875 aa11.46□□□□□ -0.57
HLA-B-258ENST00000640615 THUMPD2Q9BTF0 503 aaKnown RBP11.46□□□□□ -0.57
HLA-B-258ENST00000640615 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.57
HLA-B-258ENST00000640615 MAP3K5Q99683 1374 aa11.45□□□□□ -0.58
HLA-B-258ENST00000640615 CALD1Q05682 793 aaKnown RBP11.45□□□□□ -0.58
HLA-B-258ENST00000640615 IFNL2Q8IZJ0 200 aa11.45□□□□□ -0.58
HLA-B-258ENST00000640615 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
HLA-B-258ENST00000640615 OVOS2A0A0G2JMS6 1433 aa11.44□□□□□ -0.58
HLA-B-258ENST00000640615 PLEKHG2Q9H7P9 1386 aa11.44□□□□□ -0.58
HLA-B-258ENST00000640615 E9PSI1 815 aa11.44□□□□□ -0.58
HLA-B-258ENST00000640615 PHKG2P15735 406 aa11.44□□□□□ -0.58
HLA-B-258ENST00000640615 SLFN5Q08AF3 891 aa11.44□□□□□ -0.58
HLA-B-258ENST00000640615 MPRIPQ6WCQ1 1025 aa11.44□□□□□ -0.58
HLA-B-258ENST00000640615 BARGINQ6ZT62 677 aa11.44□□□□□ -0.58
HLA-B-258ENST00000640615 DDX54Q8TDD1 881 aaKnown RBP11.44□□□□□ -0.58
HLA-B-258ENST00000640615 SPINK5Q9NQ38 1064 aaPredicted RBP11.44□□□□□ -0.58
HLA-B-258ENST00000640615 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
HLA-B-258ENST00000640615 PCDH11XQ9BZA7 1347 aa11.43□□□□□ -0.58
HLA-B-258ENST00000640615 PCDH11YQ9BZA8 1340 aa11.43□□□□□ -0.58
HLA-B-258ENST00000640615 EXOC5O00471 708 aa11.43□□□□□ -0.58
HLA-B-258ENST00000640615 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
HLA-B-258ENST00000640615 IL17REQ8NFR9 667 aa11.43□□□□□ -0.58
HLA-B-258ENST00000640615 IL16Q14005 1332 aa11.42□□□□□ -0.58
HLA-B-258ENST00000640615 A0A0G2JS52 829 aa11.42□□□□□ -0.58
HLA-B-258ENST00000640615 CYP27B1O15528 508 aa11.42□□□□□ -0.58
HLA-B-258ENST00000640615 MYT1Q01538 1121 aa11.42□□□□□ -0.58
HLA-B-258ENST00000640615 MYH16Q9H6N6 1097 aa11.42□□□□□ -0.58
HLA-B-258ENST00000640615 LGR6Q9HBX8 967 aa11.42□□□□□ -0.58
HLA-B-258ENST00000640615 DISP2A7MBM2 1401 aa11.42□□□□□ -0.58
HLA-B-258ENST00000640615 RNMTO43148 476 aaKnown RBP11.41□□□□□ -0.58
HLA-B-258ENST00000640615 HSP90AB1P08238 724 aaKnown RBP11.41□□□□□ -0.58
HLA-B-258ENST00000640615 GNAI1P63096 354 aa11.41□□□□□ -0.58
HLA-B-258ENST00000640615 DDB1Q16531 1140 aa11.41□□□□□ -0.58
HLA-B-258ENST00000640615 SEPT12Q8IYM1 358 aa11.41□□□□□ -0.58
HLA-B-258ENST00000640615 IFT57Q9NWB7 429 aa11.41□□□□□ -0.58
HLA-B-258ENST00000640615 LRP5O75197 1615 aa11.41□□□□□ -0.58
HLA-B-258ENST00000640615 TEFQ10587 303 aa11.4□□□□□ -0.58
HLA-B-258ENST00000640615 DUSP27Q5VZP5 1158 aa11.4□□□□□ -0.58
HLA-B-258ENST00000640615 TRMT2AQ8IZ69 625 aaKnown RBP11.4□□□□□ -0.58
HLA-B-258ENST00000640615 TSR2Q969E8 191 aaKnown RBP11.4□□□□□ -0.58
HLA-B-258ENST00000640615 DCAF5Q96JK2 942 aa11.4□□□□□ -0.58
HLA-B-258ENST00000640615 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
HLA-B-258ENST00000640615 PARP4Q9UKK3 1724 aaKnown RBP11.4□□□□□ -0.58
HLA-B-258ENST00000640615 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.59
HLA-B-258ENST00000640615 ZNF853P0CG23 659 aa11.39□□□□□ -0.59
HLA-B-258ENST00000640615 TAF7Q15545 349 aaPredicted RBP11.39□□□□□ -0.59
HLA-B-258ENST00000640615 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
HLA-B-258ENST00000640615 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
HLA-B-258ENST00000640615 CABP4P57796 275 aa11.38□□□□□ -0.59
HLA-B-258ENST00000640615 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
HLA-B-258ENST00000640615 KRT27Q7Z3Y8 459 aa11.38□□□□□ -0.59
HLA-B-258ENST00000640615 MBIPQ9NS73 344 aa11.38□□□□□ -0.59
HLA-B-258ENST00000640615 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
HLA-B-258ENST00000640615 CEMIPQ8WUJ3 1361 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms