RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 INTS3Q68E01 1043 aaKnown RBP18.01■□□□□ 0.47
SCARB2-221ENST00000640341 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCARB2-221ENST00000640341 ACEP12821 1306 aa18■□□□□ 0.47
SCARB2-221ENST00000640341 MAP2P11137 1827 aaKnown RBP18■□□□□ 0.47
SCARB2-221ENST00000640341 CIZ1Q9ULV3 898 aaPredicted RBP18■□□□□ 0.47
SCARB2-221ENST00000640341 ZGPATQ8N5A5 531 aaKnown RBP18■□□□□ 0.47
SCARB2-221ENST00000640341 ANKRD44Q8N8A2 993 aa18■□□□□ 0.47
SCARB2-221ENST00000640341 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
SCARB2-221ENST00000640341 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
SCARB2-221ENST00000640341 CAVIN1Q6NZI2 390 aaKnown RBP17.98■□□□□ 0.47
SCARB2-221ENST00000640341 BAG4O95429 457 aaKnown RBP17.98■□□□□ 0.47
SCARB2-221ENST00000640341 CPS1P31327 1500 aa17.98■□□□□ 0.47
SCARB2-221ENST00000640341 RILPL2Q969X0 211 aa17.98■□□□□ 0.47
SCARB2-221ENST00000640341 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
SCARB2-221ENST00000640341 TRIM6-TRIM34B2RNG4 842 aa17.97■□□□□ 0.47
SCARB2-221ENST00000640341 RABEP1Q15276 862 aa17.97■□□□□ 0.47
SCARB2-221ENST00000640341 USP26Q9BXU7 913 aa17.97■□□□□ 0.47
SCARB2-221ENST00000640341 A2ML1A8K2U0 1454 aa17.97■□□□□ 0.47
SCARB2-221ENST00000640341 AMPHP49418 695 aa17.97■□□□□ 0.47
SCARB2-221ENST00000640341 ATP7BP35670 1465 aa17.97■□□□□ 0.47
SCARB2-221ENST00000640341 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
SCARB2-221ENST00000640341 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
SCARB2-221ENST00000640341 CHL1O00533 1208 aa17.96■□□□□ 0.47
SCARB2-221ENST00000640341 RPAP2Q8IXW5 612 aaPredicted RBP17.96■□□□□ 0.47
SCARB2-221ENST00000640341 NGDNQ8NEJ9 315 aaKnown RBP17.96■□□□□ 0.47
SCARB2-221ENST00000640341 SKOR2Q2VWA4 1001 aaPredicted RBP17.95■□□□□ 0.46
SCARB2-221ENST00000640341 ESPNB1AK53 854 aa17.95■□□□□ 0.46
SCARB2-221ENST00000640341 MTHFSDQ2M296 383 aaKnown RBP17.95■□□□□ 0.46
SCARB2-221ENST00000640341 ANP32BQ92688 251 aaKnown RBP17.95■□□□□ 0.46
SCARB2-221ENST00000640341 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
SCARB2-221ENST00000640341 ST18O60284 1047 aa17.95■□□□□ 0.46
SCARB2-221ENST00000640341 PRPF40AO75400 957 aaKnown RBP17.95■□□□□ 0.46
SCARB2-221ENST00000640341 CPSF1Q10570 1443 aaKnown RBP17.95■□□□□ 0.46
SCARB2-221ENST00000640341 NCOA3Q9Y6Q9 1424 aa17.95■□□□□ 0.46
SCARB2-221ENST00000640341 ERBB4Q15303 1308 aa17.94■□□□□ 0.46
SCARB2-221ENST00000640341 CEBPAP49715 358 aaPredicted RBP17.94■□□□□ 0.46
SCARB2-221ENST00000640341 NEK4P51957 841 aa17.94■□□□□ 0.46
SCARB2-221ENST00000640341 NASPP49321 788 aaPredicted RBP17.94■□□□□ 0.46
SCARB2-221ENST00000640341 STK31Q9BXU1 1019 aa17.94■□□□□ 0.46
SCARB2-221ENST00000640341 HMMRO75330 724 aa17.93■□□□□ 0.46
SCARB2-221ENST00000640341 HAP1P54257 671 aaPredicted RBP17.93■□□□□ 0.46
SCARB2-221ENST00000640341 RTL1A6NKG5 1358 aa17.93■□□□□ 0.46
SCARB2-221ENST00000640341 MAP3K19Q56UN5 1328 aa17.93■□□□□ 0.46
SCARB2-221ENST00000640341 HDGFP51858 240 aaKnown RBP17.92■□□□□ 0.46
SCARB2-221ENST00000640341 CDK12Q9NYV4 1490 aaPredicted RBP17.92■□□□□ 0.46
SCARB2-221ENST00000640341 KIF20BQ96Q89 1820 aa17.92■□□□□ 0.46
SCARB2-221ENST00000640341 ANO2Q9NQ90 1003 aa17.92■□□□□ 0.46
SCARB2-221ENST00000640341 RBM27Q9P2N5 1060 aaKnown RBP17.92■□□□□ 0.46
SCARB2-221ENST00000640341 TSPOAP1O95153 1857 aa17.92■□□□□ 0.46
SCARB2-221ENST00000640341 REC8O95072 547 aa17.91■□□□□ 0.46
SCARB2-221ENST00000640341 AK9Q5TCS8 1911 aa17.91■□□□□ 0.46
SCARB2-221ENST00000640341 RICTORQ6R327 1708 aa17.91■□□□□ 0.46
SCARB2-221ENST00000640341 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
SCARB2-221ENST00000640341 MAP4K4O95819 1239 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-221ENST00000640341 ROBO2Q9HCK4 1378 aa17.91■□□□□ 0.46
SCARB2-221ENST00000640341 IL1RAPL2Q9NP60 686 aa17.91■□□□□ 0.46
SCARB2-221ENST00000640341 ANKRD26Q9UPS8 1709 aa17.9■□□□□ 0.46
SCARB2-221ENST00000640341 ERC2O15083 957 aa17.9■□□□□ 0.46
SCARB2-221ENST00000640341 CLCN1P35523 988 aa17.9■□□□□ 0.46
SCARB2-221ENST00000640341 PDE1AP54750 535 aa17.89■□□□□ 0.45
SCARB2-221ENST00000640341 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.45
SCARB2-221ENST00000640341 NUCB2P80303 420 aa17.89■□□□□ 0.45
SCARB2-221ENST00000640341 USHBP1Q8N6Y0 703 aa17.89■□□□□ 0.45
SCARB2-221ENST00000640341 NLRP6P59044 892 aa17.88■□□□□ 0.45
SCARB2-221ENST00000640341 PNMA6EA0A0J9YXQ4 647 aa17.88■□□□□ 0.45
SCARB2-221ENST00000640341 GNAI2P04899 355 aa17.88■□□□□ 0.45
SCARB2-221ENST00000640341 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
SCARB2-221ENST00000640341 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
SCARB2-221ENST00000640341 PTPRCP08575 1304 aa17.87■□□□□ 0.45
SCARB2-221ENST00000640341 DTNBO60941 627 aa17.87■□□□□ 0.45
SCARB2-221ENST00000640341 LTKP29376 864 aa17.87■□□□□ 0.45
SCARB2-221ENST00000640341 KLHL40Q2TBA0 621 aa17.87■□□□□ 0.45
SCARB2-221ENST00000640341 CLTCQ00610 1675 aaKnown RBP17.87■□□□□ 0.45
SCARB2-221ENST00000640341 EYA1Q99502 592 aa17.87■□□□□ 0.45
SCARB2-221ENST00000640341 RNF214Q8ND24 703 aa17.86■□□□□ 0.45
SCARB2-221ENST00000640341 RBM33Q96EV2 1170 aaKnown RBP17.86■□□□□ 0.45
SCARB2-221ENST00000640341 FLIIQ13045 1269 aa17.86■□□□□ 0.45
SCARB2-221ENST00000640341 LARP6Q9BRS8 491 aaKnown RBP17.86■□□□□ 0.45
SCARB2-221ENST00000640341 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
SCARB2-221ENST00000640341 PTMSP20962 102 aa17.85■□□□□ 0.45
SCARB2-221ENST00000640341 NUTM1Q86Y26 1132 aa17.85■□□□□ 0.45
SCARB2-221ENST00000640341 LRRCC1Q9C099 1032 aa17.85■□□□□ 0.45
SCARB2-221ENST00000640341 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
SCARB2-221ENST00000640341 ZSCAN23Q3MJ62 389 aa17.85■□□□□ 0.45
SCARB2-221ENST00000640341 PALD1Q9ULE6 856 aa17.85■□□□□ 0.45
SCARB2-221ENST00000640341 CCT4P50991 539 aaKnown RBP17.84■□□□□ 0.45
SCARB2-221ENST00000640341 RGS12O14924 1447 aa17.84■□□□□ 0.45
SCARB2-221ENST00000640341 GDPD2Q9HCC8 539 aa17.84■□□□□ 0.45
SCARB2-221ENST00000640341 MX1P20591 662 aa17.83■□□□□ 0.45
SCARB2-221ENST00000640341 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.45
SCARB2-221ENST00000640341 ISY1Q9ULR0 285 aaKnown RBP17.83■□□□□ 0.45
SCARB2-221ENST00000640341 AMOTL2Q9Y2J4 779 aa17.83■□□□□ 0.45
SCARB2-221ENST00000640341 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.44
SCARB2-221ENST00000640341 TMX3Q96JJ7 454 aa17.83■□□□□ 0.44
SCARB2-221ENST00000640341 SYCE3A1L190 88 aa17.82■□□□□ 0.44
SCARB2-221ENST00000640341 UNC5CLQ8IV45 518 aa17.82■□□□□ 0.44
SCARB2-221ENST00000640341 DLG5Q8TDM6 1919 aa17.82■□□□□ 0.44
SCARB2-221ENST00000640341 NSFL1CQ9UNZ2 370 aaKnown RBP17.82■□□□□ 0.44
SCARB2-221ENST00000640341 KNDC1Q76NI1 1749 aa17.82■□□□□ 0.44
SCARB2-221ENST00000640341 ANXA1P04083 346 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms