RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 ZCRB1Q8TBF4 217 aaKnown RBP22.84■■□□□ 1.25
SPIN3-228ENST00000639794 SHANK3Q9BYB0 1731 aa22.83■■□□□ 1.24
SPIN3-228ENST00000639794 KCNQ2O43526 872 aa22.81■■□□□ 1.24
SPIN3-228ENST00000639794 NPC1L1Q9UHC9 1359 aa22.81■■□□□ 1.24
SPIN3-228ENST00000639794 EZH2Q15910 746 aaKnown RBP22.81■■□□□ 1.24
SPIN3-228ENST00000639794 AEBP1Q8IUX7 1158 aa22.78■■□□□ 1.24
SPIN3-228ENST00000639794 SYTL4Q96C24 671 aaPredicted RBP22.77■■□□□ 1.24
SPIN3-228ENST00000639794 BCL11BQ9C0K0 894 aaPredicted RBP22.76■■□□□ 1.23
SPIN3-228ENST00000639794 IGSF1Q8N6C5 1336 aa22.76■■□□□ 1.23
SPIN3-228ENST00000639794 DOT1LQ8TEK3 1739 aa22.75■■□□□ 1.23
SPIN3-228ENST00000639794 IL13P35225 146 aa22.75■■□□□ 1.23
SPIN3-228ENST00000639794 SULT6B1Q6IMI4 303 aa22.74■■□□□ 1.23
SPIN3-228ENST00000639794 NCAPD2Q15021 1401 aa22.74■■□□□ 1.23
SPIN3-228ENST00000639794 NHSQ6T4R5 1651 aa22.74■■□□□ 1.23
SPIN3-228ENST00000639794 HMOX1P09601 288 aa22.73■■□□□ 1.23
SPIN3-228ENST00000639794 CAMKK2Q96RR4 588 aa22.73■■□□□ 1.23
SPIN3-228ENST00000639794 PCDH11XQ9BZA7 1347 aa22.73■■□□□ 1.23
SPIN3-228ENST00000639794 PCDH11YQ9BZA8 1340 aa22.73■■□□□ 1.23
SPIN3-228ENST00000639794 PKD1L3Q7Z443 1732 aa22.72■■□□□ 1.23
SPIN3-228ENST00000639794 CYP27B1O15528 508 aa22.72■■□□□ 1.23
SPIN3-228ENST00000639794 DIAPH1O60610 1272 aaKnown RBP22.72■■□□□ 1.23
SPIN3-228ENST00000639794 PPP2R1AP30153 589 aa22.72■■□□□ 1.23
SPIN3-228ENST00000639794 BTAF1O14981 1849 aa22.72■■□□□ 1.23
SPIN3-228ENST00000639794 U2SURPO15042 1029 aaKnown RBP22.71■■□□□ 1.23
SPIN3-228ENST00000639794 PRIM1P49642 420 aaKnown RBP22.71■■□□□ 1.23
SPIN3-228ENST00000639794 SPG7Q9UQ90 795 aa22.71■■□□□ 1.23
SPIN3-228ENST00000639794 BCL9O00512 1426 aa22.71■■□□□ 1.23
SPIN3-228ENST00000639794 PSDA5PKW4 1024 aaPredicted RBP22.68■■□□□ 1.22
SPIN3-228ENST00000639794 SRCAPQ6ZRS2 3230 aa22.67■■□□□ 1.22
SPIN3-228ENST00000639794 CFAP53Q96M91 514 aa22.67■■□□□ 1.22
SPIN3-228ENST00000639794 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
SPIN3-228ENST00000639794 RREB1Q92766 1687 aa22.66■■□□□ 1.22
SPIN3-228ENST00000639794 NUP188Q5SRE5 1749 aa22.65■■□□□ 1.22
SPIN3-228ENST00000639794 ZNF530Q6P9A1 599 aaPredicted RBP22.65■■□□□ 1.22
SPIN3-228ENST00000639794 MPRIPQ6WCQ1 1025 aa22.65■■□□□ 1.22
SPIN3-228ENST00000639794 TOGARAM1Q9Y4F4 1720 aa22.65■■□□□ 1.22
SPIN3-228ENST00000639794 PLEKHO1Q53GL0 409 aaPredicted RBP22.64■■□□□ 1.21
SPIN3-228ENST00000639794 PARD3Q8TEW0 1356 aa22.64■■□□□ 1.21
SPIN3-228ENST00000639794 ITGB4P16144 1822 aa22.63■■□□□ 1.21
SPIN3-228ENST00000639794 ZNF316A6NFI3 1004 aaPredicted RBP22.63■■□□□ 1.21
SPIN3-228ENST00000639794 PLSCR1O15162 318 aa22.63■■□□□ 1.21
SPIN3-228ENST00000639794 PHKG2P15735 406 aa22.63■■□□□ 1.21
SPIN3-228ENST00000639794 R3HDM1Q15032 1099 aaKnown RBP22.63■■□□□ 1.21
SPIN3-228ENST00000639794 IFNL2Q8IZJ0 200 aa22.63■■□□□ 1.21
SPIN3-228ENST00000639794 PROM2Q8N271 834 aa22.62■■□□□ 1.21
SPIN3-228ENST00000639794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.62■■□□□ 1.211e-6■□□□□ 10.8
SPIN3-228ENST00000639794 TXNRD1Q16881 649 aa22.62■■□□□ 1.21
SPIN3-228ENST00000639794 KDRP35968 1356 aa22.61■■□□□ 1.21
SPIN3-228ENST00000639794 KCNQ4P56696 695 aa22.61■■□□□ 1.21
SPIN3-228ENST00000639794 RGPD3A6NKT7 1758 aaPredicted RBP22.6■■□□□ 1.21
SPIN3-228ENST00000639794 RGPD4Q7Z3J3 1758 aa22.6■■□□□ 1.21
SPIN3-228ENST00000639794 C1orf141Q5JVX7 400 aa22.59■■□□□ 1.21
SPIN3-228ENST00000639794 U2AF1L5P0DN76 240 aaPredicted RBP22.58■■□□□ 1.21
SPIN3-228ENST00000639794 U2AF1Q01081 240 aaKnown RBP eCLIP22.58■■□□□ 1.21
SPIN3-228ENST00000639794 AMOTQ4VCS5 1084 aa22.58■■□□□ 1.21
SPIN3-228ENST00000639794 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
SPIN3-228ENST00000639794 NKX1-1Q15270 411 aaPredicted RBP22.56■■□□□ 1.2
SPIN3-228ENST00000639794 RALBP1Q15311 655 aa22.56■■□□□ 1.2
SPIN3-228ENST00000639794 NBPF14Q5TI25 921 aa22.56■■□□□ 1.2
SPIN3-228ENST00000639794 ANO8Q9HCE9 1232 aaPredicted RBP22.56■■□□□ 1.2
SPIN3-228ENST00000639794 PIGBQ92521 554 aa22.55■■□□□ 1.2
SPIN3-228ENST00000639794 TMOD3Q9NYL9 352 aa22.55■■□□□ 1.2
SPIN3-228ENST00000639794 PRKAR2BP31323 418 aa22.54■■□□□ 1.2
SPIN3-228ENST00000639794 MTHFSDQ2M296 383 aaKnown RBP22.54■■□□□ 1.2
SPIN3-228ENST00000639794 LRRC4BQ9NT99 713 aa22.54■■□□□ 1.2
SPIN3-228ENST00000639794 VIRMAQ69YN4 1812 aaKnown RBP22.53■■□□□ 1.2
SPIN3-228ENST00000639794 KDM6AO15550 1401 aaPredicted RBP22.52■■□□□ 1.2
SPIN3-228ENST00000639794 HSP90AB1P08238 724 aaKnown RBP22.52■■□□□ 1.2
SPIN3-228ENST00000639794 DCAF5Q96JK2 942 aa22.52■■□□□ 1.2
SPIN3-228ENST00000639794 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
SPIN3-228ENST00000639794 CCNL1Q9UK58 526 aaPredicted RBP22.51■■□□□ 1.19
SPIN3-228ENST00000639794 LY75O60449 1722 aa22.5■■□□□ 1.19
SPIN3-228ENST00000639794 PALLDQ8WX93 1383 aa22.5■■□□□ 1.19
SPIN3-228ENST00000639794 PHACTR3Q96KR7 559 aa22.5■■□□□ 1.19
SPIN3-228ENST00000639794 RSPH6AQ9H0K4 717 aa22.5■■□□□ 1.19
SPIN3-228ENST00000639794 PLEKHG2Q9H7P9 1386 aa22.49■■□□□ 1.19
SPIN3-228ENST00000639794 CABP4P57796 275 aa22.49■■□□□ 1.19
SPIN3-228ENST00000639794 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
SPIN3-228ENST00000639794 ASAP1Q9ULH1 1129 aa22.49■■□□□ 1.19
SPIN3-228ENST00000639794 PRKRIP1Q9H875 184 aaPredicted RBP22.49■■□□□ 1.19
SPIN3-228ENST00000639794 LGR6Q9HBX8 967 aa22.49■■□□□ 1.19
SPIN3-228ENST00000639794 STK32BQ9NY57 414 aa22.49■■□□□ 1.19
SPIN3-228ENST00000639794 SCN11AQ9UI33 1791 aa22.48■■□□□ 1.19
SPIN3-228ENST00000639794 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
SPIN3-228ENST00000639794 PDGFDQ9GZP0 370 aaPredicted RBP22.46■■□□□ 1.19
SPIN3-228ENST00000639794 ERVV-2B6SEH9 535 aa22.46■■□□□ 1.19
SPIN3-228ENST00000639794 ZNF827Q17R98 1081 aa22.46■■□□□ 1.19
SPIN3-228ENST00000639794 SLC27A3Q5K4L6 730 aa22.46■■□□□ 1.19
SPIN3-228ENST00000639794 SLC15A2Q16348 729 aa22.45■■□□□ 1.18
SPIN3-228ENST00000639794 SMARCC1Q92922 1105 aaPredicted RBP22.44■■□□□ 1.18
SPIN3-228ENST00000639794 ATG3Q9NT62 314 aa22.44■■□□□ 1.18
SPIN3-228ENST00000639794 PAPPAQ13219 1627 aa22.43■■□□□ 1.18
SPIN3-228ENST00000639794 RNMTO43148 476 aaKnown RBP22.43■■□□□ 1.18
SPIN3-228ENST00000639794 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
SPIN3-228ENST00000639794 RBM42Q9BTD8 480 aaKnown RBP22.43■■□□□ 1.18
SPIN3-228ENST00000639794 FCHSD2O94868 740 aa22.42■■□□□ 1.18
SPIN3-228ENST00000639794 C5P01031 1676 aa22.42■■□□□ 1.18
SPIN3-228ENST00000639794 MAP3K5Q99683 1374 aa22.42■■□□□ 1.18
SPIN3-228ENST00000639794 TAF1LQ8IZX4 1826 aa22.41■■□□□ 1.18
SPIN3-228ENST00000639794 GNAT3A8MTJ3 354 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms