RNA–Protein interactions for RNA: ENST00000639544.1

KCNMA1-264, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-264ENST00000639544 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.21
KCNMA1-264ENST00000639544 LTV1Q96GA3 475 aaPredicted RBP13.71□□□□□ -0.21
KCNMA1-264ENST00000639544 SULT6B1Q6IMI4 303 aa13.71□□□□□ -0.22
KCNMA1-264ENST00000639544 STRN4Q9NRL3 753 aa13.71□□□□□ -0.22
KCNMA1-264ENST00000639544 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
KCNMA1-264ENST00000639544 ZBTB7CA1YPR0 619 aa13.7□□□□□ -0.22
KCNMA1-264ENST00000639544 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
KCNMA1-264ENST00000639544 TRPC5Q9UL62 973 aaPredicted RBP13.7□□□□□ -0.22
KCNMA1-264ENST00000639544 KDM6AO15550 1401 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-264ENST00000639544 HMOX1P09601 288 aa13.68□□□□□ -0.22
KCNMA1-264ENST00000639544 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
KCNMA1-264ENST00000639544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.68□□□□□ -0.22
KCNMA1-264ENST00000639544 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-264ENST00000639544 TOM1L2Q6ZVM7 507 aa13.68□□□□□ -0.22
KCNMA1-264ENST00000639544 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-264ENST00000639544 ZNF521Q96K83 1311 aa13.68□□□□□ -0.22
KCNMA1-264ENST00000639544 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
KCNMA1-264ENST00000639544 NLRP2Q9NX02 1062 aa13.67□□□□□ -0.22
KCNMA1-264ENST00000639544 ZNF831Q5JPB2 1677 aa13.67□□□□□ -0.22
KCNMA1-264ENST00000639544 CEMIPQ8WUJ3 1361 aa13.67□□□□□ -0.22
KCNMA1-264ENST00000639544 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 CYP27B1O15528 508 aa13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 NKX1-1Q15270 411 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 RGPD3A6NKT7 1758 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 RGPD4Q7Z3J3 1758 aa13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 LY75O60449 1722 aa13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 IL2RBP14784 551 aa13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 EVA1CP58658 441 aa13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
KCNMA1-264ENST00000639544 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
KCNMA1-264ENST00000639544 BTAF1O14981 1849 aa13.65□□□□□ -0.22
KCNMA1-264ENST00000639544 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
KCNMA1-264ENST00000639544 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
KCNMA1-264ENST00000639544 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
KCNMA1-264ENST00000639544 RUNDC1Q96C34 613 aa13.64□□□□□ -0.23
KCNMA1-264ENST00000639544 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
KCNMA1-264ENST00000639544 CDCA7Q9BWT1 371 aaPredicted RBP13.63□□□□□ -0.23
KCNMA1-264ENST00000639544 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
KCNMA1-264ENST00000639544 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
KCNMA1-264ENST00000639544 RREB1Q92766 1687 aa13.62□□□□□ -0.23
KCNMA1-264ENST00000639544 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
KCNMA1-264ENST00000639544 PHKG2P15735 406 aa13.62□□□□□ -0.23
KCNMA1-264ENST00000639544 LRP5O75197 1615 aa13.61□□□□□ -0.23
KCNMA1-264ENST00000639544 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-264ENST00000639544 C5P01031 1676 aa13.61□□□□□ -0.23
KCNMA1-264ENST00000639544 TJP1Q07157 1748 aa13.61□□□□□ -0.23
KCNMA1-264ENST00000639544 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
KCNMA1-264ENST00000639544 USP35Q9P2H5 1018 aa13.61□□□□□ -0.23
KCNMA1-264ENST00000639544 COL5A3P25940 1745 aaPredicted RBP13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 MAP3K5Q99683 1374 aa13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 WDR43Q15061 677 aaKnown RBP eCLIP13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 NFE2L2Q16236 605 aa13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 AMOTQ4VCS5 1084 aa13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 SEPT12Q8IYM1 358 aa13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 UPF1Q92900 1129 aaKnown RBP eCLIP13.6□□□□□ -0.23
KCNMA1-264ENST00000639544 TAF1LQ8IZX4 1826 aa13.59□□□□□ -0.23
KCNMA1-264ENST00000639544 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
KCNMA1-264ENST00000639544 PCDH11YQ9BZA8 1340 aa13.59□□□□□ -0.23
KCNMA1-264ENST00000639544 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
KCNMA1-264ENST00000639544 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
KCNMA1-264ENST00000639544 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
KCNMA1-264ENST00000639544 APAF1O14727 1248 aa13.58□□□□□ -0.24
KCNMA1-264ENST00000639544 AKAP4Q5JQC9 854 aa13.58□□□□□ -0.24
KCNMA1-264ENST00000639544 RXRBP28702 533 aa13.58□□□□□ -0.24
KCNMA1-264ENST00000639544 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.24
KCNMA1-264ENST00000639544 LAMB4A4D0S4 1761 aa13.58□□□□□ -0.24
KCNMA1-264ENST00000639544 HTATSF1O43719 755 aaKnown RBP13.57□□□□□ -0.24
KCNMA1-264ENST00000639544 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
KCNMA1-264ENST00000639544 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
KCNMA1-264ENST00000639544 ZNF853P0CG23 659 aa13.56□□□□□ -0.24
KCNMA1-264ENST00000639544 DDB1Q16531 1140 aa13.56□□□□□ -0.24
KCNMA1-264ENST00000639544 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
KCNMA1-264ENST00000639544 SPG7Q9UQ90 795 aa13.55□□□□□ -0.24
KCNMA1-264ENST00000639544 HEG1Q9ULI3 1381 aa13.55□□□□□ -0.24
KCNMA1-264ENST00000639544 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
KCNMA1-264ENST00000639544 PNNQ9H307 717 aaKnown RBP13.55□□□□□ -0.24
KCNMA1-264ENST00000639544 WWC1Q8IX03 1113 aa13.54□□□□□ -0.24
KCNMA1-264ENST00000639544 IFNL2Q8IZJ0 200 aa13.54□□□□□ -0.24
KCNMA1-264ENST00000639544 EXOC5O00471 708 aa13.54□□□□□ -0.24
KCNMA1-264ENST00000639544 RNMTO43148 476 aaKnown RBP13.54□□□□□ -0.24
KCNMA1-264ENST00000639544 ZNF530Q6P9A1 599 aaPredicted RBP13.54□□□□□ -0.24
KCNMA1-264ENST00000639544 PTF1AQ7RTS3 328 aa13.54□□□□□ -0.24
KCNMA1-264ENST00000639544 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
KCNMA1-264ENST00000639544 GNAT3A8MTJ3 354 aa13.53□□□□□ -0.24
KCNMA1-264ENST00000639544 RRP7AQ9Y3A4 280 aaKnown RBP13.53□□□□□ -0.24
KCNMA1-264ENST00000639544 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.24
KCNMA1-264ENST00000639544 RIPK4P57078 832 aa13.52□□□□□ -0.24
KCNMA1-264ENST00000639544 DCTN1Q14203 1278 aa13.52□□□□□ -0.24
KCNMA1-264ENST00000639544 DCAF5Q96JK2 942 aa13.52□□□□□ -0.24
KCNMA1-264ENST00000639544 CCDC9Q9Y3X0 531 aaKnown RBP13.52□□□□□ -0.24
KCNMA1-264ENST00000639544 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.24
KCNMA1-264ENST00000639544 MCM10Q7L590 875 aa13.51□□□□□ -0.25
KCNMA1-264ENST00000639544 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
KCNMA1-264ENST00000639544 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
KCNMA1-264ENST00000639544 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
KCNMA1-264ENST00000639544 ZBED9Q6R2W3 1325 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms