RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 ATP2B1P20020 1258 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 MYCBPQ99417 103 aaPredicted RBP12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 CCDC160A6NGH7 325 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 GSDMDP57764 484 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 STK3Q13188 491 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 ZNF830Q96NB3 372 aaPredicted RBP12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 SWAP70Q9UH65 585 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 BRD4O60885 1362 aaPredicted RBP12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 STIM1Q13586 685 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 IMMTQ16891 758 aaKnown RBP12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 ZKSCAN5Q9Y2L8 839 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 HYPKQ9NX55 129 aa12.75□□□□□ -0.37
KCNMA1-259ENST00000639406 ANKRD1Q15327 319 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 EBAG9O00559 213 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 KIF5BP33176 963 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 UBE4AQ14139 1066 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 OTUD6BQ8N6M0 293 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 TANGO6Q9C0B7 1094 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 CCDC6Q16204 474 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 C6orf163Q5TEZ5 329 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 TBC1D2Q9BYX2 928 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 ANO10Q9NW15 660 aa12.74□□□□□ -0.37
KCNMA1-259ENST00000639406 ZSCAN23Q3MJ62 389 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 CCDC121Q6ZUS5 278 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 SOGA1O94964 1423 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 HSF2BPO75031 334 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 CLNS1AP54105 237 aaKnown RBP12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 LRCH2Q5VUJ6 765 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 MAATS1Q7Z4T9 603 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 SUDS3Q9H7L9 328 aaPredicted RBP12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 RRAGDQ9NQL2 400 aaPredicted RBP12.73□□□□□ -0.37
KCNMA1-259ENST00000639406 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 CCDC43Q96MW1 224 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 VPS18Q9P253 973 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 STAMBPO95630 424 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 CFAP57Q96MR6 1250 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 GOLIM4O00461 696 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 NEBLO76041 1014 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 SPA17Q15506 151 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 GOLGA6L9A6NEM1 432 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 FBF1Q8TES7 1133 aa12.72□□□□□ -0.37
KCNMA1-259ENST00000639406 KIF3BO15066 747 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 MAP2K2P36507 400 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 EIF5P55010 431 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 CEP112Q8N8E3 955 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 ZSCAN31Q96LW9 406 aaPredicted RBP12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 GABPB1Q06547 395 aaPredicted RBP12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 RBM27Q9P2N5 1060 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 MCM6Q14566 821 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 SPECC1Q5M775 1068 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 CDK5RAP3Q96JB5 506 aa12.71□□□□□ -0.37
KCNMA1-259ENST00000639406 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.38
KCNMA1-259ENST00000639406 HIP1O00291 1037 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 RAD21O60216 631 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 PAFAH1B1P43034 410 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 BCAR3O75815 825 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 SLU7O95391 586 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 TMC6Q7Z403 805 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 HS1BP3Q53T59 392 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 CCDC114Q96M63 670 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 PIP4K2BP78356 416 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
KCNMA1-259ENST00000639406 WASHC2CQ9Y4E1 1318 aa12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 CHD1LQ86WJ1 897 aa12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 V9GYY5 206 aaPredicted RBP12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 ATRIPQ8WXE1 791 aa12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 GNAI1P63096 354 aa12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 MIPOL1Q8TD10 442 aa12.69□□□□□ -0.38
KCNMA1-259ENST00000639406 POGZQ7Z3K3 1410 aa12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 NAP1L3Q99457 506 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 GNG11P61952 73 aa12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 CCDC150Q8NCX0 1101 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms