RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 NBPF6Q5VWK0 638 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 NAA16Q6N069 864 aaPredicted RBP6.3□□□□□ -1.4
RTTN-214ENST00000639128 NBPF5PQ86XG9 351 aaPredicted RBP6.3□□□□□ -1.4
RTTN-214ENST00000639128 TAF4BQ92750 862 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 NBPF4Q96M43 638 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 TAOK3Q9H2K8 898 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 CWC22Q9HCG8 908 aaKnown RBP6.3□□□□□ -1.4
RTTN-214ENST00000639128 GOPCQ9HD26 462 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 RB1CC1Q8TDY2 1594 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 ZFXP17010 805 aaPredicted RBP6.3□□□□□ -1.4
RTTN-214ENST00000639128 CEBPZQ03701 1054 aaKnown RBP6.3□□□□□ -1.4
RTTN-214ENST00000639128 HOOK3Q86VS8 718 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 PDILTQ8N807 584 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 ATAD2Q6PL18 1390 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 KINO60870 393 aaKnown RBP6.3□□□□□ -1.4
RTTN-214ENST00000639128 CFAP58Q5T655 872 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 SYNE3Q6ZMZ3 975 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 TACO1Q9BSH4 297 aaKnown RBP6.3□□□□□ -1.4
RTTN-214ENST00000639128 TRIM21P19474 475 aaKnown RBP6.29□□□□□ -1.4
RTTN-214ENST00000639128 SLC8A1P32418 973 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 NAP1L4Q99733 375 aaKnown RBP6.29□□□□□ -1.4
RTTN-214ENST00000639128 WWC3Q9ULE0 1092 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 RAD21O60216 631 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 IBSPP21815 317 aaPredicted RBP6.29□□□□□ -1.4
RTTN-214ENST00000639128 PRR16Q569H4 304 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 SDF4Q9BRK5 362 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 NBPF3Q9H094 633 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 RSPH14Q9UHP6 348 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 EPS15P42566 896 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 IRX4P78413 519 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 IFFO1Q0D2I5 559 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 WWC2Q6AWC2 1192 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 NBPF11Q86T75 865 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 SPATS2Q86XZ4 545 aaKnown RBP6.29□□□□□ -1.4
RTTN-214ENST00000639128 DIABLOQ9NR28 239 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 MAGEC2Q9UBF1 373 aaPredicted RBP6.29□□□□□ -1.4
RTTN-214ENST00000639128 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.29□□□□□ -1.4
RTTN-214ENST00000639128 LRRFIP2Q9Y608 721 aaKnown RBP6.29□□□□□ -1.4
RTTN-214ENST00000639128 FERP16591 822 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 GBP1P32455 592 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 PCK1P35558 622 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 ATP11AP98196 1134 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 UBE4AQ14139 1066 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 NBPF8Q3BBV2 869 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 ARHGAP29Q52LW3 1261 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 NGEFQ8N5V2 710 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 DTNBP1Q96EV8 351 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 VEZTQ9HBM0 779 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 ARFGAP3Q9NP61 516 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 MTUS1Q9ULD2 1270 aa6.29□□□□□ -1.4
RTTN-214ENST00000639128 CCDC171Q6TFL3 1326 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 NPM3O75607 178 aaKnown RBP6.28□□□□□ -1.4
RTTN-214ENST00000639128 CASQ1P31415 396 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 PAFAH1B1P43034 410 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 SLC4A8Q2Y0W8 1093 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 LRRC45Q96CN5 670 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 GBP5Q96PP8 586 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 CWC25Q9NXE8 425 aaPredicted RBP6.28□□□□□ -1.4
RTTN-214ENST00000639128 SAFBQ15424 915 aaKnown RBP eCLIP6.28□□□□□ -1.4
RTTN-214ENST00000639128 HS1BP3Q53T59 392 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 TRIM4Q9C037 500 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 EPB41L2O43491 1005 aaKnown RBP6.28□□□□□ -1.4
RTTN-214ENST00000639128 SERPINI2O75830 405 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 TRDNQ13061 729 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 MCTP1Q6DN14 999 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 JMYQ8N9B5 988 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 ITGB1BP2Q9UKP3 347 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 FAN1Q9Y2M0 1017 aa6.28□□□□□ -1.4
RTTN-214ENST00000639128 CAPN2P17655 700 aa6.27□□□□□ -1.4
RTTN-214ENST00000639128 EIF5P55010 431 aaKnown RBP6.27□□□□□ -1.4
RTTN-214ENST00000639128 BCL2L13Q9BXK5 485 aa6.27□□□□□ -1.4
RTTN-214ENST00000639128 HYPKQ9NX55 129 aa6.27□□□□□ -1.4
RTTN-214ENST00000639128 PAIP2BQ9ULR5 123 aaKnown RBP6.27□□□□□ -1.4
RTTN-214ENST00000639128 TPX2Q9ULW0 747 aaKnown RBP6.27□□□□□ -1.4
RTTN-214ENST00000639128 SMTNL1A8MU46 457 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 CAVIN2O95810 425 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 GSDMDP57764 484 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 ARHGAP24Q8N264 748 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 SMC1BQ8NDV3 1235 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 DRC1Q96MC2 740 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 TRIM7Q9C029 511 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 FAF1Q9UNN5 650 aaPredicted RBP6.27□□□□□ -1.41
RTTN-214ENST00000639128 USO1O60763 962 aaKnown RBP6.27□□□□□ -1.41
RTTN-214ENST00000639128 FAM160A1Q05DH4 1040 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 DYNC1I2Q13409 638 aaKnown RBP6.27□□□□□ -1.41
RTTN-214ENST00000639128 PDCD2Q16342 344 aaPredicted RBP6.27□□□□□ -1.41
RTTN-214ENST00000639128 SPECC1Q5M775 1068 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 ZFYVE27Q5T4F4 411 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 SPDL1Q96EA4 605 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 CREB3O43889 395 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 UTP14CQ5TAP6 766 aaKnown RBP6.27□□□□□ -1.41
RTTN-214ENST00000639128 TMEM57Q8N5G2 664 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 GFM2Q969S9 779 aaKnown RBP6.27□□□□□ -1.41
RTTN-214ENST00000639128 TBC1D31Q96DN5 1066 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 DAAM1Q9Y4D1 1078 aa6.27□□□□□ -1.41
RTTN-214ENST00000639128 GIGYF1O75420 1035 aaPredicted RBP6.26□□□□□ -1.41
RTTN-214ENST00000639128 VIMP08670 466 aaKnown RBP6.26□□□□□ -1.41
RTTN-214ENST00000639128 KIF5AQ12840 1032 aa6.26□□□□□ -1.41
RTTN-214ENST00000639128 FLOT2Q14254 428 aa6.26□□□□□ -1.41
RTTN-214ENST00000639128 CACNA2D4Q7Z3S7 1137 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms