RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 AMOTQ4VCS5 1084 aa23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 WNK3Q9BYP7 1800 aa23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 TMPOP42166 694 aaKnown RBP23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 GAS2L2Q8NHY3 880 aa23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 GJD4Q96KN9 370 aaPredicted RBP23.28■■□□□ 1.32
SPTAN1-217ENST00000629089 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
SPTAN1-217ENST00000629089 NFE2L2Q16236 605 aa23.27■■□□□ 1.32
SPTAN1-217ENST00000629089 BARGINQ6ZT62 677 aa23.27■■□□□ 1.32
SPTAN1-217ENST00000629089 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
SPTAN1-217ENST00000629089 SPG7Q9UQ90 795 aa23.27■■□□□ 1.32
SPTAN1-217ENST00000629089 PLEKHG2Q9H7P9 1386 aa23.27■■□□□ 1.31
SPTAN1-217ENST00000629089 CDCA7Q9BWT1 371 aaPredicted RBP23.26■■□□□ 1.31
SPTAN1-217ENST00000629089 RIPK4P57078 832 aa23.25■■□□□ 1.31
SPTAN1-217ENST00000629089 FAM98CQ17RN3 349 aaKnown RBP23.25■■□□□ 1.31
SPTAN1-217ENST00000629089 DISP2A7MBM2 1401 aa23.25■■□□□ 1.31
SPTAN1-217ENST00000629089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.24■■□□□ 1.31
SPTAN1-217ENST00000629089 PKD1L3Q7Z443 1732 aa23.24■■□□□ 1.31
SPTAN1-217ENST00000629089 GLI3P10071 1580 aa23.24■■□□□ 1.31
SPTAN1-217ENST00000629089 ZNF530Q6P9A1 599 aaPredicted RBP23.23■■□□□ 1.31
SPTAN1-217ENST00000629089 ZCRB1Q8TBF4 217 aaKnown RBP23.23■■□□□ 1.31
SPTAN1-217ENST00000629089 A0A0G2JS52 829 aa23.23■■□□□ 1.31
SPTAN1-217ENST00000629089 MYT1Q01538 1121 aa23.23■■□□□ 1.31
SPTAN1-217ENST00000629089 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
SPTAN1-217ENST00000629089 NGEFQ8N5V2 710 aa23.22■■□□□ 1.31
SPTAN1-217ENST00000629089 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
SPTAN1-217ENST00000629089 EXOC5O00471 708 aa23.21■■□□□ 1.31
SPTAN1-217ENST00000629089 PCDH11XQ9BZA7 1347 aa23.19■■□□□ 1.3
SPTAN1-217ENST00000629089 PCDH11YQ9BZA8 1340 aa23.19■■□□□ 1.3
SPTAN1-217ENST00000629089 LMOD3Q0VAK6 560 aa23.19■■□□□ 1.3
SPTAN1-217ENST00000629089 DDB1Q16531 1140 aa23.19■■□□□ 1.3
SPTAN1-217ENST00000629089 AKAP4Q5JQC9 854 aa23.19■■□□□ 1.3
SPTAN1-217ENST00000629089 GNAT3A8MTJ3 354 aa23.18■■□□□ 1.3
SPTAN1-217ENST00000629089 RTF1Q92541 710 aaKnown RBP23.18■■□□□ 1.3
SPTAN1-217ENST00000629089 MAP3K5Q99683 1374 aa23.18■■□□□ 1.3
SPTAN1-217ENST00000629089 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
SPTAN1-217ENST00000629089 IFNL2Q8IZJ0 200 aa23.18■■□□□ 1.3
SPTAN1-217ENST00000629089 DDX54Q8TDD1 881 aaKnown RBP23.18■■□□□ 1.3
SPTAN1-217ENST00000629089 RGS17Q9UGC6 210 aaPredicted RBP23.18■■□□□ 1.3
SPTAN1-217ENST00000629089 ZBED9Q6R2W3 1325 aa23.17■■□□□ 1.3
SPTAN1-217ENST00000629089 LRRC37A3O60309 1634 aa23.17■■□□□ 1.3
SPTAN1-217ENST00000629089 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
SPTAN1-217ENST00000629089 CCDC27Q2M243 656 aa23.17■■□□□ 1.3
SPTAN1-217ENST00000629089 TNS2Q63HR2 1409 aa23.17■■□□□ 1.3
SPTAN1-217ENST00000629089 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
SPTAN1-217ENST00000629089 SHANK3Q9BYB0 1731 aa23.16■■□□□ 1.3
SPTAN1-217ENST00000629089 PHKG2P15735 406 aa23.16■■□□□ 1.3
SPTAN1-217ENST00000629089 THSD7AQ9UPZ6 1657 aa23.15■■□□□ 1.3
SPTAN1-217ENST00000629089 CYP27B1O15528 508 aa23.15■■□□□ 1.3
SPTAN1-217ENST00000629089 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
SPTAN1-217ENST00000629089 HTATSF1O43719 755 aaKnown RBP23.14■■□□□ 1.3
SPTAN1-217ENST00000629089 ONECUT3O60422 494 aaPredicted RBP23.13■■□□□ 1.29
SPTAN1-217ENST00000629089 RXRBP28702 533 aa23.13■■□□□ 1.29
SPTAN1-217ENST00000629089 DCTN1Q14203 1278 aa23.13■■□□□ 1.29
SPTAN1-217ENST00000629089 MCM10Q7L590 875 aa23.13■■□□□ 1.29
SPTAN1-217ENST00000629089 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
SPTAN1-217ENST00000629089 MPRIPQ6WCQ1 1025 aa23.13■■□□□ 1.29
SPTAN1-217ENST00000629089 SEPT12Q8IYM1 358 aa23.13■■□□□ 1.29
SPTAN1-217ENST00000629089 PDE3BQ13370 1112 aa23.11■■□□□ 1.29
SPTAN1-217ENST00000629089 POTEAQ6S8J7 498 aa23.11■■□□□ 1.29
SPTAN1-217ENST00000629089 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
SPTAN1-217ENST00000629089 ZNF521Q96K83 1311 aa23.1■■□□□ 1.29
SPTAN1-217ENST00000629089 IL17REQ8NFR9 667 aa23.09■■□□□ 1.29
SPTAN1-217ENST00000629089 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
SPTAN1-217ENST00000629089 LGR6Q9HBX8 967 aa23.09■■□□□ 1.29
SPTAN1-217ENST00000629089 RNMTO43148 476 aaKnown RBP23.08■■□□□ 1.29
SPTAN1-217ENST00000629089 CALD1Q05682 793 aaKnown RBP23.08■■□□□ 1.29
SPTAN1-217ENST00000629089 WDR63Q8IWG1 891 aa23.08■■□□□ 1.29
SPTAN1-217ENST00000629089 VIRMAQ69YN4 1812 aaKnown RBP23.08■■□□□ 1.29
SPTAN1-217ENST00000629089 GOLGA2Q08379 1002 aa23.07■■□□□ 1.28
SPTAN1-217ENST00000629089 NKX1-1Q15270 411 aaPredicted RBP23.07■■□□□ 1.28
SPTAN1-217ENST00000629089 MARCH10Q8NA82 808 aaPredicted RBP23.07■■□□□ 1.28
SPTAN1-217ENST00000629089 KDM6AO15550 1401 aaPredicted RBP23.06■■□□□ 1.28
SPTAN1-217ENST00000629089 SCN11AQ9UI33 1791 aa23.06■■□□□ 1.28
SPTAN1-217ENST00000629089 TEFQ10587 303 aa23.05■■□□□ 1.28
SPTAN1-217ENST00000629089 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
SPTAN1-217ENST00000629089 ADAMTS7Q9UKP4 1686 aa23.04■■□□□ 1.28
SPTAN1-217ENST00000629089 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
SPTAN1-217ENST00000629089 IL16Q14005 1332 aa23.03■■□□□ 1.28
SPTAN1-217ENST00000629089 CDCA7LQ96GN5 454 aa23.02■■□□□ 1.28
SPTAN1-217ENST00000629089 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
SPTAN1-217ENST00000629089 RGS12O14924 1447 aa23.01■■□□□ 1.27
SPTAN1-217ENST00000629089 CABP4P57796 275 aa23.01■■□□□ 1.27
SPTAN1-217ENST00000629089 KRT27Q7Z3Y8 459 aa23.01■■□□□ 1.27
SPTAN1-217ENST00000629089 ERVV-2B6SEH9 535 aa23■■□□□ 1.27
SPTAN1-217ENST00000629089 E9PSI1 815 aa23■■□□□ 1.27
SPTAN1-217ENST00000629089 GNAI1P63096 354 aa23■■□□□ 1.27
SPTAN1-217ENST00000629089 SLC52A2Q9HAB3 445 aa23■■□□□ 1.27
SPTAN1-217ENST00000629089 SPINK5Q9NQ38 1064 aaPredicted RBP23■■□□□ 1.27
SPTAN1-217ENST00000629089 IFT57Q9NWB7 429 aa23■■□□□ 1.27
SPTAN1-217ENST00000629089 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
SPTAN1-217ENST00000629089 TAF7Q15545 349 aaPredicted RBP22.99■■□□□ 1.27
SPTAN1-217ENST00000629089 CFAP44Q96MT7 982 aa22.99■■□□□ 1.27
SPTAN1-217ENST00000629089 SLFN5Q08AF3 891 aa22.98■■□□□ 1.27
SPTAN1-217ENST00000629089 FAM182BQ5T319 152 aa22.98■■□□□ 1.27
SPTAN1-217ENST00000629089 NFATC2IPQ8NCF5 419 aa22.98■■□□□ 1.27
SPTAN1-217ENST00000629089 MYH16Q9H6N6 1097 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms