RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	WHAMM	Q8TF30	809 aa		11.31	□□□□□ -0.6
NRXN1-223	ENST00000625891	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.31	□□□□□ -0.6
NRXN1-223	ENST00000625891	POLM	Q9NP87	494 aa	Predicted RBP	11.31	□□□□□ -0.6
NRXN1-223	ENST00000625891	SENP3-EIF4A1	A0A087X0R7	540 aa		11.3	□□□□□ -0.6
NRXN1-223	ENST00000625891		A6NJR5	290 aa		11.3	□□□□□ -0.6
NRXN1-223	ENST00000625891	NBPF20	Q3BBV1	942 aa		11.3	□□□□□ -0.6
NRXN1-223	ENST00000625891	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.29	□□□□□ -0.6
NRXN1-223	ENST00000625891	ARHGEF15	O94989	841 aa		11.28	□□□□□ -0.6
NRXN1-223	ENST00000625891	ADH1A	P07327	375 aa		11.28	□□□□□ -0.6
NRXN1-223	ENST00000625891	ADD1	P35611	737 aa	Known RBP	11.28	□□□□□ -0.6
NRXN1-223	ENST00000625891	TBC1D2B	Q9UPU7	963 aa		11.28	□□□□□ -0.6
NRXN1-223	ENST00000625891	APBB1	O00213	710 aa		11.27	□□□□□ -0.61
NRXN1-223	ENST00000625891	LILRA1	O75019	489 aa		11.27	□□□□□ -0.61
NRXN1-223	ENST00000625891	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.27	□□□□□ -0.61
NRXN1-223	ENST00000625891	KDF1	Q8NAX2	398 aa	Predicted RBP	11.27	□□□□□ -0.61
NRXN1-223	ENST00000625891	ERVH48-1	M5A8F1	160 aa		11.26	□□□□□ -0.61
NRXN1-223	ENST00000625891	RAB15	P59190	212 aa		11.26	□□□□□ -0.61
NRXN1-223	ENST00000625891	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.26	□□□□□ -0.61
NRXN1-223	ENST00000625891	GDPD2	Q9HCC8	539 aa		11.26	□□□□□ -0.61
NRXN1-223	ENST00000625891	PTGIR	P43119	386 aa		11.25	□□□□□ -0.61
NRXN1-223	ENST00000625891	NDUFB9	Q9Y6M9	179 aa		11.25	□□□□□ -0.61
NRXN1-223	ENST00000625891	ESPN	B1AK53	854 aa		11.24	□□□□□ -0.61
NRXN1-223	ENST00000625891	DZIP3	Q86Y13	1208 aa	Known RBP	11.24	□□□□□ -0.61
NRXN1-223	ENST00000625891	PNMA1	Q8ND90	353 aa		11.24	□□□□□ -0.61
NRXN1-223	ENST00000625891	RAD21	O60216	631 aa		11.23	□□□□□ -0.61
NRXN1-223	ENST00000625891	IRF5	Q13568	498 aa		11.22	□□□□□ -0.61
NRXN1-223	ENST00000625891	PROSER2	Q86WR7	435 aa	Predicted RBP	11.22	□□□□□ -0.61
NRXN1-223	ENST00000625891	ADAMTS2	O95450	1211 aa		11.21	□□□□□ -0.61
NRXN1-223	ENST00000625891	IRS1	P35568	1242 aa		11.21	□□□□□ -0.61
NRXN1-223	ENST00000625891	LYSMD3	Q7Z3D4	306 aa		11.21	□□□□□ -0.61
NRXN1-223	ENST00000625891	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.21	□□□□□ -0.61
NRXN1-223	ENST00000625891	TRAK2	O60296	914 aa		11.2	□□□□□ -0.62
NRXN1-223	ENST00000625891	PRM3	Q9NNZ6	103 aa		11.2	□□□□□ -0.62
NRXN1-223	ENST00000625891	MARS	P56192	900 aa	Known RBP	11.19	□□□□□ -0.62
NRXN1-223	ENST00000625891	SRSF11	Q05519	484 aa	Known RBP	11.19	□□□□□ -0.62
NRXN1-223	ENST00000625891	GAS6	Q14393	721 aa		11.19	□□□□□ -0.62
NRXN1-223	ENST00000625891	LYPD4	Q6UWN0	246 aa		11.19	□□□□□ -0.62
NRXN1-223	ENST00000625891	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.19	□□□□□ -0.62
NRXN1-223	ENST00000625891	ABL2	P42684	1182 aa		11.18	□□□□□ -0.62
NRXN1-223	ENST00000625891	SEPT12	Q8IYM1	358 aa		11.18	□□□□□ -0.62
NRXN1-223	ENST00000625891	RNF144A	P50876	292 aa	Predicted RBP	11.17	□□□□□ -0.62
NRXN1-223	ENST00000625891	KANK3	Q6NY19	840 aa		11.17	□□□□□ -0.62
NRXN1-223	ENST00000625891	CYLD	Q9NQC7	956 aa		11.17	□□□□□ -0.62
NRXN1-223	ENST00000625891	PRICKLE2	Q7Z3G6	844 aa		11.16	□□□□□ -0.62
NRXN1-223	ENST00000625891	SCARF2	Q96GP6	870 aa	Predicted RBP	11.16	□□□□□ -0.62
NRXN1-223	ENST00000625891	CELA2B	P08218	269 aa	Predicted RBP	11.14	□□□□□ -0.63
NRXN1-223	ENST00000625891	RHOQ	P17081	205 aa		11.14	□□□□□ -0.63
NRXN1-223	ENST00000625891	GPAT2	Q6NUI2	795 aa		11.14	□□□□□ -0.63
NRXN1-223	ENST00000625891	IGHA1	P01876	353 aa		11.13	□□□□□ -0.63
NRXN1-223	ENST00000625891	MAP3K10	Q02779	954 aa		11.13	□□□□□ -0.63
NRXN1-223	ENST00000625891	TRIM52	Q96A61	297 aa		11.13	□□□□□ -0.63
NRXN1-223	ENST00000625891	SUPT5H	O00267	1087 aa	Known RBP	11.12	□□□□□ -0.63
NRXN1-223	ENST00000625891	TRIM22	Q8IYM9	498 aa		11.12	□□□□□ -0.63
NRXN1-223	ENST00000625891	ZNF837	Q96EG3	531 aa	Predicted RBP	11.12	□□□□□ -0.63
NRXN1-223	ENST00000625891	GMCL1	Q96IK5	515 aa		11.12	□□□□□ -0.63
NRXN1-223	ENST00000625891	C1orf115	Q9H7X2	142 aa		11.12	□□□□□ -0.63
NRXN1-223	ENST00000625891	ATP5J2-PTCD1	G3V325	749 aa		11.11	□□□□□ -0.63
NRXN1-223	ENST00000625891	GIGYF1	O75420	1035 aa	Predicted RBP	11.11	□□□□□ -0.63
NRXN1-223	ENST00000625891	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.11	□□□□□ -0.63
NRXN1-223	ENST00000625891	GPC1	P35052	558 aa		11.1	□□□□□ -0.63
NRXN1-223	ENST00000625891	FOXK2	Q01167	660 aa		11.1	□□□□□ -0.63
NRXN1-223	ENST00000625891	WASHC4	Q2M389	1173 aa		11.1	□□□□□ -0.63
NRXN1-223	ENST00000625891	POM121C	A8CG34	1229 aa		11.09	□□□□□ -0.63
NRXN1-223	ENST00000625891	ENAM	Q9NRM1	1142 aa		11.09	□□□□□ -0.63
NRXN1-223	ENST00000625891	MBIP	Q9NS73	344 aa		11.09	□□□□□ -0.63
NRXN1-223	ENST00000625891	ZBBX	A8MT70	800 aa		11.08	□□□□□ -0.64
NRXN1-223	ENST00000625891	FBXO45	P0C2W1	286 aa		11.08	□□□□□ -0.64
NRXN1-223	ENST00000625891	VAC14	Q08AM6	782 aa		11.08	□□□□□ -0.64
NRXN1-223	ENST00000625891	DBN1	Q16643	649 aa		11.08	□□□□□ -0.64
NRXN1-223	ENST00000625891	WWC1	Q8IX03	1113 aa		11.08	□□□□□ -0.64
NRXN1-223	ENST00000625891	PCDHB9	Q9Y5E1	797 aa		11.08	□□□□□ -0.64
NRXN1-223	ENST00000625891		A0A1W2PRU2	124 aa		11.07	□□□□□ -0.64
NRXN1-223	ENST00000625891	GPR25	O00155	361 aa		11.07	□□□□□ -0.64
NRXN1-223	ENST00000625891	MEN1	O00255	615 aa		11.07	□□□□□ -0.64
NRXN1-223	ENST00000625891	FOXR1	Q6PIV2	292 aa		11.07	□□□□□ -0.64
NRXN1-223	ENST00000625891	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.07	□□□□□ -0.64
NRXN1-223	ENST00000625891	DYRK1B	Q9Y463	629 aa		11.07	□□□□□ -0.64
NRXN1-223	ENST00000625891	ARID3C	A6NKF2	412 aa		11.06	□□□□□ -0.64
NRXN1-223	ENST00000625891	NR1H3	Q13133	447 aa		11.06	□□□□□ -0.64
NRXN1-223	ENST00000625891	RIPOR1	Q6ZS17	1223 aa		11.06	□□□□□ -0.64
NRXN1-223	ENST00000625891	CCDC125	Q86Z20	511 aa		11.06	□□□□□ -0.64
NRXN1-223	ENST00000625891	IGF1R	P08069	1367 aa		11.05	□□□□□ -0.64
NRXN1-223	ENST00000625891	ERVK-9	P63128	1117 aa		11.05	□□□□□ -0.64
NRXN1-223	ENST00000625891	ADAMTS19	Q8TE59	1207 aa		11.05	□□□□□ -0.64
NRXN1-223	ENST00000625891	POU4F2	Q12837	409 aa		11.04	□□□□□ -0.64
NRXN1-223	ENST00000625891	CC2D2B	Q6DHV5	1058 aa		11.04	□□□□□ -0.64
NRXN1-223	ENST00000625891	GTPBP3	Q969Y2	492 aa	Known RBP	11.03	□□□□□ -0.64
NRXN1-223	ENST00000625891	GRIP2	Q9C0E4	1043 aa		11.03	□□□□□ -0.64
NRXN1-223	ENST00000625891	ALG2	Q9H553	416 aa		11.03	□□□□□ -0.64
NRXN1-223	ENST00000625891	CNTNAP5	Q8WYK1	1306 aa		11.03	□□□□□ -0.64
NRXN1-223	ENST00000625891		H7C1W4	665 aa		11.02	□□□□□ -0.65
NRXN1-223	ENST00000625891	BCR	P11274	1271 aa		11.02	□□□□□ -0.65
NRXN1-223	ENST00000625891	GAS2L1	Q99501	681 aa	Predicted RBP	11.02	□□□□□ -0.65
NRXN1-223	ENST00000625891	SLC27A3	Q5K4L6	730 aa		11.01	□□□□□ -0.65
NRXN1-223	ENST00000625891	RNF20	Q5VTR2	975 aa		11.01	□□□□□ -0.65
NRXN1-223	ENST00000625891	ACD	Q96AP0	544 aa		11.01	□□□□□ -0.65
NRXN1-223	ENST00000625891	NLRP3	Q96P20	1036 aa		11.01	□□□□□ -0.65
NRXN1-223	ENST00000625891	PHF20L1	A8MW92	1017 aa		11	□□□□□ -0.65
NRXN1-223	ENST00000625891	CLN3	Q13286	438 aa		11	□□□□□ -0.65
NRXN1-223	ENST00000625891	NBPF10	Q6P3W6	841 aa	Known RBP	11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms