RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 SPATA31A6Q5VVP1 1343 aa18.51■□□□□ 0.55
CLTCL1-212ENST00000622493 TATP17735 454 aaPredicted RBP18.51■□□□□ 0.55
CLTCL1-212ENST00000622493 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
CLTCL1-212ENST00000622493 GNAI1P63096 354 aa18.5■□□□□ 0.55
CLTCL1-212ENST00000622493 RCAN3Q9UKA8 241 aa18.5■□□□□ 0.55
CLTCL1-212ENST00000622493 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
CLTCL1-212ENST00000622493 MAP3K5Q99683 1374 aa18.5■□□□□ 0.55
CLTCL1-212ENST00000622493 CRB1P82279 1406 aa18.5■□□□□ 0.55
CLTCL1-212ENST00000622493 STRN4Q9NRL3 753 aa18.49■□□□□ 0.55
CLTCL1-212ENST00000622493 NUTM2BA6NNL0 878 aaPredicted RBP18.49■□□□□ 0.55
CLTCL1-212ENST00000622493 NUTM2EB1AL46 878 aaPredicted RBP18.49■□□□□ 0.55
CLTCL1-212ENST00000622493 ADAMTS2O95450 1211 aa18.49■□□□□ 0.55
CLTCL1-212ENST00000622493 AKAP4Q5JQC9 854 aa18.49■□□□□ 0.55
CLTCL1-212ENST00000622493 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
CLTCL1-212ENST00000622493 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
CLTCL1-212ENST00000622493 ZNF853P0CG23 659 aa18.48■□□□□ 0.55
CLTCL1-212ENST00000622493 LARP1Q6PKG0 1096 aaKnown RBP18.48■□□□□ 0.55
CLTCL1-212ENST00000622493 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
CLTCL1-212ENST00000622493 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
CLTCL1-212ENST00000622493 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
CLTCL1-212ENST00000622493 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
CLTCL1-212ENST00000622493 PLCH1Q4KWH8 1693 aa18.47■□□□□ 0.55
CLTCL1-212ENST00000622493 MEGF6O75095 1541 aa18.46■□□□□ 0.55
CLTCL1-212ENST00000622493 CT47B1P0C2W7 299 aaPredicted RBP18.46■□□□□ 0.55
CLTCL1-212ENST00000622493 HSPA1LP34931 641 aa18.46■□□□□ 0.55
CLTCL1-212ENST00000622493 C1orf141Q5JVX7 400 aa18.46■□□□□ 0.55
CLTCL1-212ENST00000622493 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
CLTCL1-212ENST00000622493 MCM10Q7L590 875 aa18.46■□□□□ 0.55
CLTCL1-212ENST00000622493 NWD2Q9ULI1 1742 aa18.46■□□□□ 0.55
CLTCL1-212ENST00000622493 PARP4Q9UKK3 1724 aaKnown RBP18.45■□□□□ 0.54
CLTCL1-212ENST00000622493 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
CLTCL1-212ENST00000622493 RNF123Q5XPI4 1314 aa18.45■□□□□ 0.54
CLTCL1-212ENST00000622493 SLIT2O94813 1529 aa18.45■□□□□ 0.54
CLTCL1-212ENST00000622493 PKD1L3Q7Z443 1732 aa18.44■□□□□ 0.54
CLTCL1-212ENST00000622493 IL2RBP14784 551 aa18.44■□□□□ 0.54
CLTCL1-212ENST00000622493 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
CLTCL1-212ENST00000622493 TSR2Q969E8 191 aaKnown RBP18.43■□□□□ 0.54
CLTCL1-212ENST00000622493 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
CLTCL1-212ENST00000622493 LRRC37A3O60309 1634 aa18.43■□□□□ 0.54
CLTCL1-212ENST00000622493 CHL1O00533 1208 aa18.43■□□□□ 0.54
CLTCL1-212ENST00000622493 NEFLP07196 543 aa18.43■□□□□ 0.54
CLTCL1-212ENST00000622493 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
CLTCL1-212ENST00000622493 BABAM1Q9NWV8 329 aa18.43■□□□□ 0.54
CLTCL1-212ENST00000622493 NRAPQ86VF7 1730 aa18.42■□□□□ 0.54
CLTCL1-212ENST00000622493 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
CLTCL1-212ENST00000622493 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
CLTCL1-212ENST00000622493 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
CLTCL1-212ENST00000622493 THRAP3Q9Y2W1 955 aaKnown RBP18.4■□□□□ 0.54
CLTCL1-212ENST00000622493 HSP90AB1P08238 724 aaKnown RBP18.4■□□□□ 0.54
CLTCL1-212ENST00000622493 PHKG2P15735 406 aa18.4■□□□□ 0.54
CLTCL1-212ENST00000622493 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
CLTCL1-212ENST00000622493 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
CLTCL1-212ENST00000622493 ADAMTS7Q9UKP4 1686 aa18.39■□□□□ 0.53
CLTCL1-212ENST00000622493 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
CLTCL1-212ENST00000622493 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
CLTCL1-212ENST00000622493 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
CLTCL1-212ENST00000622493 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
CLTCL1-212ENST00000622493 UNC5CLQ8IV45 518 aa18.38■□□□□ 0.53
CLTCL1-212ENST00000622493 FNBP4Q8N3X1 1017 aaPredicted RBP18.38■□□□□ 0.53
CLTCL1-212ENST00000622493 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
CLTCL1-212ENST00000622493 USP35Q9P2H5 1018 aa18.38■□□□□ 0.53
CLTCL1-212ENST00000622493 LRP6O75581 1613 aa18.38■□□□□ 0.53
CLTCL1-212ENST00000622493 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
CLTCL1-212ENST00000622493 CDCA7Q9BWT1 371 aaPredicted RBP18.37■□□□□ 0.53
CLTCL1-212ENST00000622493 LGR6Q9HBX8 967 aa18.37■□□□□ 0.53
CLTCL1-212ENST00000622493 SPATA31A1Q5TZJ5 1347 aa18.37■□□□□ 0.53
CLTCL1-212ENST00000622493 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
CLTCL1-212ENST00000622493 C8orf37Q96NL8 207 aa18.37■□□□□ 0.53
CLTCL1-212ENST00000622493 DISP2A7MBM2 1401 aa18.37■□□□□ 0.53
CLTCL1-212ENST00000622493 CYP27B1O15528 508 aa18.36■□□□□ 0.53
CLTCL1-212ENST00000622493 RARSP54136 660 aaKnown RBP18.36■□□□□ 0.53
CLTCL1-212ENST00000622493 TEFQ10587 303 aa18.36■□□□□ 0.53
CLTCL1-212ENST00000622493 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
CLTCL1-212ENST00000622493 DCAF5Q96JK2 942 aa18.36■□□□□ 0.53
CLTCL1-212ENST00000622493 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
CLTCL1-212ENST00000622493 VIRMAQ69YN4 1812 aaKnown RBP18.36■□□□□ 0.53
CLTCL1-212ENST00000622493 SPATA31A5Q5VU36 1347 aa18.35■□□□□ 0.53
CLTCL1-212ENST00000622493 SPATA31A7Q8IWB4 1347 aa18.35■□□□□ 0.53
CLTCL1-212ENST00000622493 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
CLTCL1-212ENST00000622493 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
CLTCL1-212ENST00000622493 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
CLTCL1-212ENST00000622493 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
CLTCL1-212ENST00000622493 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.53
CLTCL1-212ENST00000622493 FKBP8Q14318 412 aa18.33■□□□□ 0.52
CLTCL1-212ENST00000622493 VPS72Q15906 364 aa18.33■□□□□ 0.52
CLTCL1-212ENST00000622493 BARGINQ6ZT62 677 aa18.33■□□□□ 0.52
CLTCL1-212ENST00000622493 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.52
CLTCL1-212ENST00000622493 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.52
CLTCL1-212ENST00000622493 VAMP4O75379 141 aa18.32■□□□□ 0.52
CLTCL1-212ENST00000622493 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
CLTCL1-212ENST00000622493 ALDH1L2Q3SY69 923 aa18.32■□□□□ 0.52
CLTCL1-212ENST00000622493 MEX3CQ5U5Q3 659 aaKnown RBP18.32■□□□□ 0.52
CLTCL1-212ENST00000622493 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
CLTCL1-212ENST00000622493 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
CLTCL1-212ENST00000622493 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
CLTCL1-212ENST00000622493 BCAR3O75815 825 aa18.31■□□□□ 0.52
CLTCL1-212ENST00000622493 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
CLTCL1-212ENST00000622493 SLC52A2Q9HAB3 445 aa18.31■□□□□ 0.52
CLTCL1-212ENST00000622493 SIPA1L3O60292 1781 aaPredicted RBP18.31■□□□□ 0.52
CLTCL1-212ENST00000622493 MRC1P22897 1456 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms