RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 ZNF827Q17R98 1081 aa29.02■■■□□ 2.24
PMPCA-212ENST00000622209 CASZ1Q86V15 1759 aa29.02■■■□□ 2.24
PMPCA-212ENST00000622209 ZEB1P37275 1124 aaPredicted RBP29.01■■■□□ 2.23
PMPCA-212ENST00000622209 MTFR1LQ9H019 292 aa29.01■■■□□ 2.23
PMPCA-212ENST00000622209 MEGF6O75095 1541 aa28.99■■■□□ 2.23
PMPCA-212ENST00000622209 KCNQ4P56696 695 aa28.99■■■□□ 2.23
PMPCA-212ENST00000622209 RAPGEF4Q8WZA2 1011 aa28.99■■■□□ 2.23
PMPCA-212ENST00000622209 SMG6Q86US8 1419 aaKnown RBP28.97■■■□□ 2.23
PMPCA-212ENST00000622209 NSD3Q9BZ95 1437 aa28.97■■■□□ 2.23
PMPCA-212ENST00000622209 FAM208AQ9UK61 1670 aaKnown RBP28.97■■■□□ 2.23
PMPCA-212ENST00000622209 SLC27A3Q5K4L6 730 aa28.97■■■□□ 2.23
PMPCA-212ENST00000622209 PANK3Q9H999 370 aa28.97■■■□□ 2.23
PMPCA-212ENST00000622209 YY1P25490 414 aa28.96■■■□□ 2.23
PMPCA-212ENST00000622209 INSRP06213 1382 aa28.96■■■□□ 2.23
PMPCA-212ENST00000622209 BTAF1O14981 1849 aa28.96■■■□□ 2.23
PMPCA-212ENST00000622209 TATP17735 454 aaPredicted RBP28.95■■■□□ 2.22
PMPCA-212ENST00000622209 AKT1S1Q96B36 256 aa28.95■■■□□ 2.22
PMPCA-212ENST00000622209 EMILIN1Q9Y6C2 1016 aa28.95■■■□□ 2.22
PMPCA-212ENST00000622209 FLT4P35916 1363 aa28.94■■■□□ 2.22
PMPCA-212ENST00000622209 PPM1GO15355 546 aaPredicted RBP28.94■■■□□ 2.22
PMPCA-212ENST00000622209 CGNL1Q0VF96 1302 aa28.94■■■□□ 2.22
PMPCA-212ENST00000622209 KAT6BQ8WYB5 2073 aa28.93■■■□□ 2.22
PMPCA-212ENST00000622209 SGIP1Q9BQI5 828 aa28.93■■■□□ 2.22
PMPCA-212ENST00000622209 FHDC1Q9C0D6 1143 aaPredicted RBP28.93■■■□□ 2.22
PMPCA-212ENST00000622209 NSD2O96028 1365 aa28.91■■■□□ 2.22
PMPCA-212ENST00000622209 RGPD2P0DJD1 1756 aa28.9■■■□□ 2.22
PMPCA-212ENST00000622209 SYT17Q9BSW7 474 aa28.9■■■□□ 2.22
PMPCA-212ENST00000622209 PAPPAQ13219 1627 aa28.9■■■□□ 2.22
PMPCA-212ENST00000622209 WASHC2AQ641Q2 1341 aa28.9■■■□□ 2.22
PMPCA-212ENST00000622209 KIF24Q5T7B8 1368 aa28.89■■■□□ 2.22
PMPCA-212ENST00000622209 ARXQ96QS3 562 aa28.89■■■□□ 2.22
PMPCA-212ENST00000622209 TFCP2L1Q9NZI6 479 aa28.89■■■□□ 2.22
PMPCA-212ENST00000622209 CCNL1Q9UK58 526 aaPredicted RBP28.88■■■□□ 2.21
PMPCA-212ENST00000622209 KIF20BQ96Q89 1820 aa28.87■■■□□ 2.21
PMPCA-212ENST00000622209 PNPLA7Q6ZV29 1317 aa28.85■■■□□ 2.21
PMPCA-212ENST00000622209 PCDH11XQ9BZA7 1347 aa28.85■■■□□ 2.21
PMPCA-212ENST00000622209 PCDH11YQ9BZA8 1340 aa28.85■■■□□ 2.21
PMPCA-212ENST00000622209 CYP27B1O15528 508 aa28.83■■■□□ 2.21
PMPCA-212ENST00000622209 KNSTRNQ9Y448 316 aa28.83■■■□□ 2.21
PMPCA-212ENST00000622209 TNNT2P45379 298 aaPredicted RBP28.82■■■□□ 2.2
PMPCA-212ENST00000622209 SLC16A10Q8TF71 515 aa28.82■■■□□ 2.2
PMPCA-212ENST00000622209 DOT1LQ8TEK3 1739 aa28.82■■■□□ 2.2
PMPCA-212ENST00000622209 MPRIPQ6WCQ1 1025 aa28.81■■■□□ 2.2
PMPCA-212ENST00000622209 SHANK3Q9BYB0 1731 aa28.8■■■□□ 2.2
PMPCA-212ENST00000622209 POLKQ9UBT6 870 aa28.8■■■□□ 2.2
PMPCA-212ENST00000622209 MSH5O43196 834 aa28.79■■■□□ 2.2
PMPCA-212ENST00000622209 POLD1P28340 1107 aa28.78■■■□□ 2.2
PMPCA-212ENST00000622209 KLHL34Q8N239 644 aa28.78■■■□□ 2.2
PMPCA-212ENST00000622209 EYA1Q99502 592 aa28.78■■■□□ 2.2
PMPCA-212ENST00000622209 PER1O15534 1290 aaPredicted RBP28.76■■■□□ 2.19
PMPCA-212ENST00000622209 SPG7Q9UQ90 795 aa28.75■■■□□ 2.19
PMPCA-212ENST00000622209 COL23A1Q86Y22 540 aaPredicted RBP28.74■■■□□ 2.19
PMPCA-212ENST00000622209 PALLDQ8WX93 1383 aa28.73■■■□□ 2.19
PMPCA-212ENST00000622209 ANKRD26Q9UPS8 1709 aa28.72■■■□□ 2.19
PMPCA-212ENST00000622209 AMER1Q5JTC6 1135 aaPredicted RBP28.72■■■□□ 2.19
PMPCA-212ENST00000622209 EIF4A2Q14240 407 aaKnown RBP28.71■■■□□ 2.19
PMPCA-212ENST00000622209 PIGBQ92521 554 aa28.71■■■□□ 2.19
PMPCA-212ENST00000622209 MAP3K5Q99683 1374 aa28.71■■■□□ 2.19
PMPCA-212ENST00000622209 UTRNP46939 3433 aa28.7■■■□□ 2.19
PMPCA-212ENST00000622209 NKX1-1Q15270 411 aaPredicted RBP28.7■■■□□ 2.18
PMPCA-212ENST00000622209 NCAPD2Q15021 1401 aa28.69■■■□□ 2.18
PMPCA-212ENST00000622209 LY75O60449 1722 aa28.69■■■□□ 2.18
PMPCA-212ENST00000622209 MORC1Q86VD1 984 aa28.69■■■□□ 2.18
PMPCA-212ENST00000622209 SMARCC1Q92922 1105 aaPredicted RBP28.69■■■□□ 2.18
PMPCA-212ENST00000622209 GPR162Q16538 588 aa28.68■■■□□ 2.18
PMPCA-212ENST00000622209 MSL1Q68DK7 614 aa28.67■■■□□ 2.18
PMPCA-212ENST00000622209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.67■■■□□ 2.188e-7■■□□□ 13.3
PMPCA-212ENST00000622209 NPC1L1Q9UHC9 1359 aa28.65■■■□□ 2.18
PMPCA-212ENST00000622209 PELP1Q8IZL8 1130 aaKnown RBP28.65■■■□□ 2.18
PMPCA-212ENST00000622209 PHKG2P15735 406 aa28.64■■■□□ 2.18
PMPCA-212ENST00000622209 IFNL2Q8IZJ0 200 aa28.64■■■□□ 2.18
PMPCA-212ENST00000622209 NLGN2Q8NFZ4 835 aa28.64■■■□□ 2.18
PMPCA-212ENST00000622209 HMGB2P26583 209 aaKnown RBP28.63■■■□□ 2.17
PMPCA-212ENST00000622209 TMOD3Q9NYL9 352 aa28.63■■■□□ 2.17
PMPCA-212ENST00000622209 AK7Q96M32 723 aa28.62■■■□□ 2.17
PMPCA-212ENST00000622209 QSER1Q2KHR3 1735 aa28.62■■■□□ 2.17
PMPCA-212ENST00000622209 SMIM5Q71RC9 77 aa28.61■■■□□ 2.17
PMPCA-212ENST00000622209 FLAD1Q8NFF5 587 aa28.61■■■□□ 2.17
PMPCA-212ENST00000622209 MAP2P11137 1827 aaKnown RBP28.6■■■□□ 2.17
PMPCA-212ENST00000622209 TUBGCP6Q96RT7 1819 aa28.6■■■□□ 2.17
PMPCA-212ENST00000622209 ZNF784Q8NCA9 323 aaPredicted RBP28.6■■■□□ 2.17
PMPCA-212ENST00000622209 ASAP1Q9ULH1 1129 aa28.6■■■□□ 2.17
PMPCA-212ENST00000622209 LOC102724428A0A0B4J2F2 783 aa28.59■■■□□ 2.17
PMPCA-212ENST00000622209 SIK1P57059 783 aa28.59■■■□□ 2.17
PMPCA-212ENST00000622209 AMIGO3Q86WK7 504 aa28.59■■■□□ 2.17
PMPCA-212ENST00000622209 PKD1L3Q7Z443 1732 aa28.59■■■□□ 2.17
PMPCA-212ENST00000622209 PHF14O94880 888 aa28.58■■■□□ 2.17
PMPCA-212ENST00000622209 CC2D1BQ5T0F9 858 aaKnown RBP28.58■■■□□ 2.17
PMPCA-212ENST00000622209 TOGARAM1Q9Y4F4 1720 aa28.57■■■□□ 2.16
PMPCA-212ENST00000622209 IGSF1Q8N6C5 1336 aa28.57■■■□□ 2.16
PMPCA-212ENST00000622209 LINC00116Q8NCU8 138 aa28.56■■■□□ 2.16
PMPCA-212ENST00000622209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.54■■■□□ 2.16
PMPCA-212ENST00000622209 ATG3Q9NT62 314 aa28.54■■■□□ 2.16
PMPCA-212ENST00000622209 C5P01031 1676 aa28.54■■■□□ 2.16
PMPCA-212ENST00000622209 ATP6V1AP38606 617 aa28.53■■■□□ 2.16
PMPCA-212ENST00000622209 ITPK1Q13572 414 aa28.53■■■□□ 2.16
PMPCA-212ENST00000622209 PLEKHO1Q53GL0 409 aaPredicted RBP28.53■■■□□ 2.16
PMPCA-212ENST00000622209 COL24A1Q17RW2 1714 aa28.52■■■□□ 2.16
PMPCA-212ENST00000622209 AEBP1Q8IUX7 1158 aa28.51■■■□□ 2.15
PMPCA-212ENST00000622209 GOLGB1Q14789 3259 aaKnown RBP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms