RNA–Protein interactions for RNA: ENST00000620412.4

PMPCA-210, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-210ENST00000620412 RRS1Q15050 365 aaKnown RBP29.19■■■□□ 2.26
PMPCA-210ENST00000620412 DDX54Q8TDD1 881 aaKnown RBP29.19■■■□□ 2.26
PMPCA-210ENST00000620412 ZBTB7AO95365 584 aa29.17■■■□□ 2.26
PMPCA-210ENST00000620412 RGPD3A6NKT7 1758 aaPredicted RBP29.16■■■□□ 2.26
PMPCA-210ENST00000620412 RGPD4Q7Z3J3 1758 aa29.16■■■□□ 2.26
PMPCA-210ENST00000620412 SLC15A2Q16348 729 aa29.16■■■□□ 2.26
PMPCA-210ENST00000620412 RGPD2P0DJD1 1756 aa29.16■■■□□ 2.26
PMPCA-210ENST00000620412 NCAPD2Q15021 1401 aa29.13■■■□□ 2.25
PMPCA-210ENST00000620412 POLKQ9UBT6 870 aa29.13■■■□□ 2.25
PMPCA-210ENST00000620412 ATF5Q9Y2D1 282 aaPredicted RBP29.13■■■□□ 2.25
PMPCA-210ENST00000620412 MORC1Q86VD1 984 aa29.12■■■□□ 2.25
PMPCA-210ENST00000620412 EMILIN1Q9Y6C2 1016 aa29.12■■■□□ 2.25
PMPCA-210ENST00000620412 NBPF6Q5VWK0 638 aa29.08■■■□□ 2.25
PMPCA-210ENST00000620412 NBPF4Q96M43 638 aa29.08■■■□□ 2.25
PMPCA-210ENST00000620412 HSP90AB2PQ58FF8 381 aa29.07■■■□□ 2.24
PMPCA-210ENST00000620412 NHSQ6T4R5 1651 aa29.07■■■□□ 2.24
PMPCA-210ENST00000620412 USHBP1Q8N6Y0 703 aa29.07■■■□□ 2.24
PMPCA-210ENST00000620412 ZCRB1Q8TBF4 217 aaKnown RBP29.07■■■□□ 2.24
PMPCA-210ENST00000620412 SYTL4Q96C24 671 aaPredicted RBP29.07■■■□□ 2.24
PMPCA-210ENST00000620412 PLEKHG2Q9H7P9 1386 aa29.07■■■□□ 2.24
PMPCA-210ENST00000620412 PTGER2P43116 358 aa29.05■■■□□ 2.24
PMPCA-210ENST00000620412 PRIM1P49642 420 aaKnown RBP29.05■■■□□ 2.24
PMPCA-210ENST00000620412 LRRC4BQ9NT99 713 aa29.05■■■□□ 2.24
PMPCA-210ENST00000620412 DCAF8L1A6NGE4 600 aa29.02■■■□□ 2.24
PMPCA-210ENST00000620412 ZNF827Q17R98 1081 aa29.02■■■□□ 2.24
PMPCA-210ENST00000620412 CASZ1Q86V15 1759 aa29.02■■■□□ 2.24
PMPCA-210ENST00000620412 SHANK3Q9BYB0 1731 aa29.02■■■□□ 2.24
PMPCA-210ENST00000620412 MTFR1LQ9H019 292 aa29.01■■■□□ 2.23
PMPCA-210ENST00000620412 TNNT2P45379 298 aaPredicted RBP29■■■□□ 2.23
PMPCA-210ENST00000620412 PKD1L3Q7Z443 1732 aa29■■■□□ 2.23
PMPCA-210ENST00000620412 MEGF6O75095 1541 aa28.99■■■□□ 2.23
PMPCA-210ENST00000620412 KCNQ4P56696 695 aa28.99■■■□□ 2.23
PMPCA-210ENST00000620412 CC2D1BQ5T0F9 858 aaKnown RBP28.99■■■□□ 2.23
PMPCA-210ENST00000620412 RAPGEF4Q8WZA2 1011 aa28.99■■■□□ 2.23
PMPCA-210ENST00000620412 SLC27A3Q5K4L6 730 aa28.97■■■□□ 2.23
PMPCA-210ENST00000620412 PPM1GO15355 546 aaPredicted RBP28.96■■■□□ 2.23
PMPCA-210ENST00000620412 YY1P25490 414 aa28.96■■■□□ 2.23
PMPCA-210ENST00000620412 BTAF1O14981 1849 aa28.96■■■□□ 2.23
PMPCA-210ENST00000620412 TATP17735 454 aaPredicted RBP28.95■■■□□ 2.22
PMPCA-210ENST00000620412 AKT1S1Q96B36 256 aa28.95■■■□□ 2.22
PMPCA-210ENST00000620412 EIF4A2Q14240 407 aaKnown RBP28.94■■■□□ 2.22
PMPCA-210ENST00000620412 IGSF1Q8N6C5 1336 aa28.94■■■□□ 2.22
PMPCA-210ENST00000620412 KAT6BQ8WYB5 2073 aa28.93■■■□□ 2.22
PMPCA-210ENST00000620412 COL3A1P02461 1466 aaPredicted RBP28.93■■■□□ 2.22
PMPCA-210ENST00000620412 SGIP1Q9BQI5 828 aa28.93■■■□□ 2.22
PMPCA-210ENST00000620412 FHDC1Q9C0D6 1143 aaPredicted RBP28.93■■■□□ 2.22
PMPCA-210ENST00000620412 MTHFSP49914 203 aa28.9■■■□□ 2.22
PMPCA-210ENST00000620412 SYT17Q9BSW7 474 aa28.9■■■□□ 2.22
PMPCA-210ENST00000620412 PAPPAQ13219 1627 aa28.9■■■□□ 2.22
PMPCA-210ENST00000620412 ARXQ96QS3 562 aa28.89■■■□□ 2.22
PMPCA-210ENST00000620412 EYA1Q99502 592 aa28.89■■■□□ 2.22
PMPCA-210ENST00000620412 TFCP2L1Q9NZI6 479 aa28.89■■■□□ 2.22
PMPCA-210ENST00000620412 KDRP35968 1356 aa28.88■■■□□ 2.21
PMPCA-210ENST00000620412 CCNL1Q9UK58 526 aaPredicted RBP28.88■■■□□ 2.21
PMPCA-210ENST00000620412 PNPLA7Q6ZV29 1317 aa28.85■■■□□ 2.21
PMPCA-210ENST00000620412 PCDH11XQ9BZA7 1347 aa28.85■■■□□ 2.21
PMPCA-210ENST00000620412 PCDH11YQ9BZA8 1340 aa28.85■■■□□ 2.21
PMPCA-210ENST00000620412 IL13P35225 146 aa28.84■■■□□ 2.21
PMPCA-210ENST00000620412 DDX10Q13206 875 aaKnown RBP28.84■■■□□ 2.21
PMPCA-210ENST00000620412 CYP27B1O15528 508 aa28.83■■■□□ 2.21
PMPCA-210ENST00000620412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.83■■■□□ 2.212e-6■■□□□ 11.9
PMPCA-210ENST00000620412 ZNF316A6NFI3 1004 aaPredicted RBP28.82■■■□□ 2.2
PMPCA-210ENST00000620412 SLC16A10Q8TF71 515 aa28.82■■■□□ 2.2
PMPCA-210ENST00000620412 DOT1LQ8TEK3 1739 aa28.82■■■□□ 2.2
PMPCA-210ENST00000620412 MPRIPQ6WCQ1 1025 aa28.81■■■□□ 2.2
PMPCA-210ENST00000620412 PPP2R1AP30153 589 aa28.8■■■□□ 2.2
PMPCA-210ENST00000620412 RALBP1Q15311 655 aa28.8■■■□□ 2.2
PMPCA-210ENST00000620412 MSH5O43196 834 aa28.79■■■□□ 2.2
PMPCA-210ENST00000620412 DIAPH1O60610 1272 aaKnown RBP28.78■■■□□ 2.2
PMPCA-210ENST00000620412 POLD1P28340 1107 aa28.78■■■□□ 2.2
PMPCA-210ENST00000620412 KLHL34Q8N239 644 aa28.78■■■□□ 2.2
PMPCA-210ENST00000620412 CFAP53Q96M91 514 aa28.76■■■□□ 2.19
PMPCA-210ENST00000620412 SPG7Q9UQ90 795 aa28.75■■■□□ 2.19
PMPCA-210ENST00000620412 COL23A1Q86Y22 540 aaPredicted RBP28.74■■■□□ 2.19
PMPCA-210ENST00000620412 PALLDQ8WX93 1383 aa28.73■■■□□ 2.19
PMPCA-210ENST00000620412 TOGARAM1Q9Y4F4 1720 aa28.72■■■□□ 2.19
PMPCA-210ENST00000620412 PIGBQ92521 554 aa28.71■■■□□ 2.19
PMPCA-210ENST00000620412 MAP3K5Q99683 1374 aa28.71■■■□□ 2.19
PMPCA-210ENST00000620412 UTRNP46939 3433 aa28.7■■■□□ 2.19
PMPCA-210ENST00000620412 NKX1-1Q15270 411 aaPredicted RBP28.7■■■□□ 2.18
PMPCA-210ENST00000620412 AMOTQ4VCS5 1084 aa28.7■■■□□ 2.18
PMPCA-210ENST00000620412 LY75O60449 1722 aa28.69■■■□□ 2.18
PMPCA-210ENST00000620412 CNGB1Q14028 1251 aaPredicted RBP28.69■■■□□ 2.18
PMPCA-210ENST00000620412 SMARCC1Q92922 1105 aaPredicted RBP28.69■■■□□ 2.18
PMPCA-210ENST00000620412 GPR162Q16538 588 aa28.68■■■□□ 2.18
PMPCA-210ENST00000620412 SULT6B1Q6IMI4 303 aa28.68■■■□□ 2.18
PMPCA-210ENST00000620412 MYBBP1AQ9BQG0 1328 aaKnown RBP28.68■■■□□ 2.18
PMPCA-210ENST00000620412 ITGB4P16144 1822 aa28.67■■■□□ 2.18
PMPCA-210ENST00000620412 MSL1Q68DK7 614 aa28.67■■■□□ 2.18
PMPCA-210ENST00000620412 AEBP1Q8IUX7 1158 aa28.66■■■□□ 2.18
PMPCA-210ENST00000620412 PELP1Q8IZL8 1130 aaKnown RBP28.65■■■□□ 2.18
PMPCA-210ENST00000620412 NUDCQ9Y266 331 aa28.65■■■□□ 2.18
PMPCA-210ENST00000620412 ADAMTS7Q9UKP4 1686 aa28.64■■■□□ 2.18
PMPCA-210ENST00000620412 PHKG2P15735 406 aa28.64■■■□□ 2.18
PMPCA-210ENST00000620412 PLEKHO1Q53GL0 409 aaPredicted RBP28.64■■■□□ 2.18
PMPCA-210ENST00000620412 IFNL2Q8IZJ0 200 aa28.64■■■□□ 2.18
PMPCA-210ENST00000620412 NLGN2Q8NFZ4 835 aa28.64■■■□□ 2.18
PMPCA-210ENST00000620412 PRKRIP1Q9H875 184 aaPredicted RBP28.64■■■□□ 2.18
PMPCA-210ENST00000620412 HMGB2P26583 209 aaKnown RBP28.63■■■□□ 2.17
PMPCA-210ENST00000620412 TMOD3Q9NYL9 352 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms