RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 ANKRD24Q8TF21 1146 aa36.08■■■■□ 3.37
BRF1-221ENST00000619151 COL5A2P05997 1499 aaPredicted RBP36.07■■■■□ 3.36
BRF1-221ENST00000619151 PLCH1Q4KWH8 1693 aa36.06■■■■□ 3.36
BRF1-221ENST00000619151 NWD2Q9ULI1 1742 aa36.05■■■■□ 3.36
BRF1-221ENST00000619151 GNAI1P63096 354 aa36.05■■■■□ 3.36
BRF1-221ENST00000619151 IFT57Q9NWB7 429 aa36.05■■■■□ 3.36
BRF1-221ENST00000619151 NBPF6Q5VWK0 638 aa36.03■■■■□ 3.36
BRF1-221ENST00000619151 NBPF4Q96M43 638 aa36.03■■■■□ 3.36
BRF1-221ENST00000619151 NCAPD2Q15021 1401 aa36.03■■■■□ 3.36
BRF1-221ENST00000619151 MTHFSDQ2M296 383 aaKnown RBP36.02■■■■□ 3.36
BRF1-221ENST00000619151 WDR17Q8IZU2 1322 aa36.01■■■■□ 3.36
BRF1-221ENST00000619151 EVA1CP58658 441 aa36.01■■■■□ 3.36
BRF1-221ENST00000619151 TSR2Q969E8 191 aaKnown RBP36.01■■■■□ 3.36
BRF1-221ENST00000619151 BCL9LQ86UU0 1499 aa36.01■■■■□ 3.35
BRF1-221ENST00000619151 UNC5CLQ8IV45 518 aa36■■■■□ 3.35
BRF1-221ENST00000619151 RTF1Q92541 710 aaKnown RBP36■■■■□ 3.35
BRF1-221ENST00000619151 HTATSF1O43719 755 aaKnown RBP35.99■■■■□ 3.35
BRF1-221ENST00000619151 USHBP1Q8N6Y0 703 aa35.99■■■■□ 3.35
BRF1-221ENST00000619151 PPP4R2Q9NY27 417 aa35.99■■■■□ 3.35
BRF1-221ENST00000619151 FAM208AQ9UK61 1670 aaKnown RBP35.99■■■■□ 3.35
BRF1-221ENST00000619151 RGPD2P0DJD1 1756 aa35.99■■■■□ 3.35
BRF1-221ENST00000619151 NRAPQ86VF7 1730 aa35.98■■■■□ 3.35
BRF1-221ENST00000619151 THUMPD2Q9BTF0 503 aaKnown RBP35.98■■■■□ 3.35
BRF1-221ENST00000619151 STRN4Q9NRL3 753 aa35.98■■■■□ 3.35
BRF1-221ENST00000619151 AFF2P51816 1311 aa35.97■■■■□ 3.35
BRF1-221ENST00000619151 CFAP44Q96MT7 982 aa35.97■■■■□ 3.35
BRF1-221ENST00000619151 CSB-PGBD3P0DP91 1061 aa35.96■■■■□ 3.35
BRF1-221ENST00000619151 USP21Q9UK80 565 aa35.96■■■■□ 3.35
BRF1-221ENST00000619151 LAS1LQ9Y4W2 734 aaKnown RBP35.96■■■■□ 3.35
BRF1-221ENST00000619151 ZNF853P0CG23 659 aa35.95■■■■□ 3.35
BRF1-221ENST00000619151 EXOSC9Q06265 439 aaKnown RBP35.95■■■■□ 3.35
BRF1-221ENST00000619151 LARP1Q6PKG0 1096 aaKnown RBP35.95■■■■□ 3.35
BRF1-221ENST00000619151 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.93■■■■□ 3.34
BRF1-221ENST00000619151 RARSP54136 660 aaKnown RBP35.93■■■■□ 3.34
BRF1-221ENST00000619151 CRB1P82279 1406 aa35.92■■■■□ 3.34
BRF1-221ENST00000619151 MAP3K5Q99683 1374 aa35.92■■■■□ 3.34
BRF1-221ENST00000619151 DCTN1Q14203 1278 aa35.92■■■■□ 3.34
BRF1-221ENST00000619151 CARD10Q9BWT7 1032 aa35.92■■■■□ 3.34
BRF1-221ENST00000619151 NLRP2Q9NX02 1062 aa35.92■■■■□ 3.34
BRF1-221ENST00000619151 GNAT3A8MTJ3 354 aa35.91■■■■□ 3.34
BRF1-221ENST00000619151 TOM1L2Q6ZVM7 507 aa35.91■■■■□ 3.34
BRF1-221ENST00000619151 PLIN1O60240 522 aa35.9■■■■□ 3.34
BRF1-221ENST00000619151 VPS72Q15906 364 aa35.9■■■■□ 3.34
BRF1-221ENST00000619151 AMOTQ4VCS5 1084 aa35.9■■■■□ 3.34
BRF1-221ENST00000619151 PLEKHO1Q53GL0 409 aaPredicted RBP35.89■■■■□ 3.34
BRF1-221ENST00000619151 MCM10Q7L590 875 aa35.89■■■■□ 3.34
BRF1-221ENST00000619151 BCAR3O75815 825 aa35.88■■■■□ 3.33
BRF1-221ENST00000619151 ZNF428Q96B54 188 aa35.88■■■■□ 3.33
BRF1-221ENST00000619151 MBIPQ9NS73 344 aa35.88■■■■□ 3.33
BRF1-221ENST00000619151 PLEKHG2Q9H7P9 1386 aa35.87■■■■□ 3.33
BRF1-221ENST00000619151 SPATA31A5Q5VU36 1347 aa35.85■■■■□ 3.33
BRF1-221ENST00000619151 SPATA31A7Q8IWB4 1347 aa35.85■■■■□ 3.33
BRF1-221ENST00000619151 LRRC37A3O60309 1634 aa35.84■■■■□ 3.33
BRF1-221ENST00000619151 CANXP27824 592 aaKnown RBP35.84■■■■□ 3.33
BRF1-221ENST00000619151 ZNF772Q68DY9 489 aaPredicted RBP35.84■■■■□ 3.33
BRF1-221ENST00000619151 TRPC5Q9UL62 973 aaPredicted RBP35.83■■■■□ 3.33
BRF1-221ENST00000619151 SPATA31A1Q5TZJ5 1347 aa35.83■■■■□ 3.33
BRF1-221ENST00000619151 ATRNO75882 1429 aa35.83■■■■□ 3.33
BRF1-221ENST00000619151 CHL1O00533 1208 aa35.82■■■■□ 3.32
BRF1-221ENST00000619151 PELP1Q8IZL8 1130 aaKnown RBP35.82■■■■□ 3.32
BRF1-221ENST00000619151 RAPGEF4Q8WZA2 1011 aa35.81■■■■□ 3.32
BRF1-221ENST00000619151 THRAP3Q9Y2W1 955 aaKnown RBP35.81■■■■□ 3.32
BRF1-221ENST00000619151 ALDH1L2Q3SY69 923 aa35.79■■■■□ 3.32
BRF1-221ENST00000619151 QTRT2Q9H974 415 aaKnown RBP35.79■■■■□ 3.32
BRF1-221ENST00000619151 AKAP4Q5JQC9 854 aa35.78■■■■□ 3.32
BRF1-221ENST00000619151 EXOC6Q8TAG9 804 aa35.78■■■■□ 3.32
BRF1-221ENST00000619151 PDE3AQ14432 1141 aa35.78■■■■□ 3.32
BRF1-221ENST00000619151 ZNF530Q6P9A1 599 aaPredicted RBP35.78■■■■□ 3.32
BRF1-221ENST00000619151 SMC4Q9NTJ3 1288 aa35.78■■■■□ 3.32
BRF1-221ENST00000619151 TATP17735 454 aaPredicted RBP35.77■■■■□ 3.32
BRF1-221ENST00000619151 C1orf141Q5JVX7 400 aa35.76■■■■□ 3.31
BRF1-221ENST00000619151 GJD4Q96KN9 370 aaPredicted RBP35.76■■■■□ 3.31
BRF1-221ENST00000619151 CRBNQ96SW2 442 aa35.76■■■■□ 3.31
BRF1-221ENST00000619151 BABAM1Q9NWV8 329 aa35.76■■■■□ 3.31
BRF1-221ENST00000619151 USP35Q9P2H5 1018 aa35.76■■■■□ 3.31
BRF1-221ENST00000619151 RGS17Q9UGC6 210 aaPredicted RBP35.76■■■■□ 3.31
BRF1-221ENST00000619151 CCDC9Q9Y3X0 531 aaKnown RBP35.76■■■■□ 3.31
BRF1-221ENST00000619151 BARGINQ6ZT62 677 aa35.74■■■■□ 3.31
BRF1-221ENST00000619151 C20orf194Q5TEA3 1177 aa35.73■■■■□ 3.31
BRF1-221ENST00000619151 FRAT1Q92837 279 aaPredicted RBP35.73■■■■□ 3.31
BRF1-221ENST00000619151 TWISTNBQ3B726 338 aaPredicted RBP35.73■■■■□ 3.31
BRF1-221ENST00000619151 BCL2L13Q9BXK5 485 aa35.73■■■■□ 3.31
BRF1-221ENST00000619151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.73■■■■□ 3.315e-8■■■■□ 20
BRF1-221ENST00000619151 TSPYL4Q9UJ04 414 aa35.73■■■■□ 3.31
BRF1-221ENST00000619151 OVOS2A0A0G2JMS6 1433 aa35.72■■■■□ 3.31
BRF1-221ENST00000619151 MS4A1P11836 297 aa35.72■■■■□ 3.31
BRF1-221ENST00000619151 IL17REQ8NFR9 667 aa35.72■■■■□ 3.31
BRF1-221ENST00000619151 SSH1Q8WYL5 1049 aa35.72■■■■□ 3.31
BRF1-221ENST00000619151 KIF16BQ96L93 1317 aa35.71■■■■□ 3.31
BRF1-221ENST00000619151 CEMIPQ8WUJ3 1361 aa35.71■■■■□ 3.31
BRF1-221ENST00000619151 VAMP4O75379 141 aa35.71■■■■□ 3.31
BRF1-221ENST00000619151 IL2RBP14784 551 aa35.71■■■■□ 3.31
BRF1-221ENST00000619151 CCDC136Q96JN2 1154 aa35.7■■■■□ 3.31
BRF1-221ENST00000619151 CDCA7Q9BWT1 371 aaPredicted RBP35.7■■■■□ 3.31
BRF1-221ENST00000619151 SPG7Q9UQ90 795 aa35.7■■■■□ 3.31
BRF1-221ENST00000619151 DISP2A7MBM2 1401 aa35.7■■■■□ 3.31
BRF1-221ENST00000619151 ZKSCAN2Q63HK3 967 aa35.69■■■■□ 3.3
BRF1-221ENST00000619151 GLI3P10071 1580 aa35.68■■■■□ 3.3
BRF1-221ENST00000619151 BRPF1P55201 1214 aaPredicted RBP35.67■■■■□ 3.3
BRF1-221ENST00000619151 TAF7Q15545 349 aaPredicted RBP35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms