RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PPP1R12BO60237 982 aaPredicted RBP17.51■□□□□ 0.39
COL5A1-208ENST00000618395 TERF2IPQ9NYB0 399 aa17.51■□□□□ 0.39
COL5A1-208ENST00000618395 HLTFQ14527 1009 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL5A1-208ENST00000618395 SOGA3Q5TF21 947 aa17.51■□□□□ 0.39
COL5A1-208ENST00000618395 TANGO6Q9C0B7 1094 aa17.51■□□□□ 0.39
COL5A1-208ENST00000618395 CSB-PGBD3P0DP91 1061 aa17.5■□□□□ 0.39
COL5A1-208ENST00000618395 TRMT1Q9NXH9 659 aaKnown RBP17.5■□□□□ 0.39
COL5A1-208ENST00000618395 MAATS1Q7Z4T9 603 aa17.5■□□□□ 0.39
COL5A1-208ENST00000618395 ZNF853P0CG23 659 aa17.5■□□□□ 0.39
COL5A1-208ENST00000618395 MCM6Q14566 821 aa17.5■□□□□ 0.39
COL5A1-208ENST00000618395 RBBP5Q15291 538 aaKnown RBP17.5■□□□□ 0.39
COL5A1-208ENST00000618395 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
COL5A1-208ENST00000618395 HIP1O00291 1037 aa17.49■□□□□ 0.39
COL5A1-208ENST00000618395 LMNTD2Q8IXW0 634 aa17.49■□□□□ 0.39
COL5A1-208ENST00000618395 ZNF622Q969S3 477 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL5A1-208ENST00000618395 ATP2C2O75185 946 aa17.49■□□□□ 0.39
COL5A1-208ENST00000618395 TOP1P11387 765 aaKnown RBP17.49■□□□□ 0.39
COL5A1-208ENST00000618395 TACC1O75410 805 aa17.49■□□□□ 0.39
COL5A1-208ENST00000618395 TUBB4BP68371 445 aa17.49■□□□□ 0.39
COL5A1-208ENST00000618395 B4GALNT4Q76KP1 1039 aa17.49■□□□□ 0.39
COL5A1-208ENST00000618395 STIM2Q9P246 746 aa17.49■□□□□ 0.39
COL5A1-208ENST00000618395 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL5A1-208ENST00000618395 GBP7Q8N8V2 638 aaPredicted RBP17.49■□□□□ 0.39
COL5A1-208ENST00000618395 ADCY5O95622 1261 aa17.48■□□□□ 0.39
COL5A1-208ENST00000618395 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL5A1-208ENST00000618395 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
COL5A1-208ENST00000618395 LARP1BQ659C4 914 aaKnown RBP17.48■□□□□ 0.39
COL5A1-208ENST00000618395 RPAINQ86UA6 219 aa17.48■□□□□ 0.39
COL5A1-208ENST00000618395 CCDC178Q5BJE1 867 aa17.48■□□□□ 0.39
COL5A1-208ENST00000618395 CETN2P41208 172 aa17.48■□□□□ 0.39
COL5A1-208ENST00000618395 WHAMMP3Q1A5X7 153 aa17.48■□□□□ 0.39
COL5A1-208ENST00000618395 SH3BGRP55822 239 aaPredicted RBP17.47■□□□□ 0.39
COL5A1-208ENST00000618395 CEP128Q6ZU80 1094 aa17.47■□□□□ 0.39
COL5A1-208ENST00000618395 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
COL5A1-208ENST00000618395 ATP11AP98196 1134 aa17.47■□□□□ 0.39
COL5A1-208ENST00000618395 OPA1O60313 960 aa17.47■□□□□ 0.39
COL5A1-208ENST00000618395 ATRIPQ8WXE1 791 aa17.47■□□□□ 0.39
COL5A1-208ENST00000618395 KIF4AO95239 1232 aa17.47■□□□□ 0.39
COL5A1-208ENST00000618395 ANO10Q9NW15 660 aa17.47■□□□□ 0.39
COL5A1-208ENST00000618395 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
COL5A1-208ENST00000618395 FSD2A1L4K1 749 aa17.46■□□□□ 0.39
COL5A1-208ENST00000618395 RFC1P35251 1148 aaPredicted RBP17.46■□□□□ 0.39
COL5A1-208ENST00000618395 NBPF11Q86T75 865 aa17.46■□□□□ 0.39
COL5A1-208ENST00000618395 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
COL5A1-208ENST00000618395 LACTBP83111 547 aaPredicted RBP17.46■□□□□ 0.39
COL5A1-208ENST00000618395 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
COL5A1-208ENST00000618395 RAD21O60216 631 aa17.46■□□□□ 0.39
COL5A1-208ENST00000618395 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
COL5A1-208ENST00000618395 USO1O60763 962 aaKnown RBP17.46■□□□□ 0.38
COL5A1-208ENST00000618395 BUB1BO60566 1050 aaPredicted RBP17.45■□□□□ 0.38
COL5A1-208ENST00000618395 ATP6V1AP38606 617 aa17.45■□□□□ 0.38
COL5A1-208ENST00000618395 ZBTB12Q9Y330 459 aaPredicted RBP17.45■□□□□ 0.38
COL5A1-208ENST00000618395 HOOK3Q86VS8 718 aa17.45■□□□□ 0.38
COL5A1-208ENST00000618395 DESP17661 470 aa17.45■□□□□ 0.38
COL5A1-208ENST00000618395 PANK1Q8TE04 598 aa17.45■□□□□ 0.38
COL5A1-208ENST00000618395 PCK1P35558 622 aa17.45■□□□□ 0.38
COL5A1-208ENST00000618395 CYP46A1Q9Y6A2 500 aa17.45■□□□□ 0.38
COL5A1-208ENST00000618395 GCKP35557 465 aa17.44■□□□□ 0.38
COL5A1-208ENST00000618395 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
COL5A1-208ENST00000618395 NBPF8Q3BBV2 869 aa17.44■□□□□ 0.38
COL5A1-208ENST00000618395 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
COL5A1-208ENST00000618395 VPS18Q9P253 973 aa17.44■□□□□ 0.38
COL5A1-208ENST00000618395 C11orf95C9JLR9 678 aaPredicted RBP17.44■□□□□ 0.38
COL5A1-208ENST00000618395 ALS2CR12Q96Q35 445 aa17.44■□□□□ 0.38
COL5A1-208ENST00000618395 KRT18P05783 430 aaKnown RBP17.44■□□□□ 0.38
COL5A1-208ENST00000618395 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
COL5A1-208ENST00000618395 STK26Q9P289 416 aa17.44■□□□□ 0.38
COL5A1-208ENST00000618395 USP25Q9UHP3 1055 aa17.44■□□□□ 0.38
COL5A1-208ENST00000618395 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
COL5A1-208ENST00000618395 ANAPC15P60006 121 aa17.44■□□□□ 0.38
COL5A1-208ENST00000618395 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
COL5A1-208ENST00000618395 RABGAP1Q9Y3P9 1069 aa17.43■□□□□ 0.38
COL5A1-208ENST00000618395 FMN1Q68DA7 1419 aa17.43■□□□□ 0.38
COL5A1-208ENST00000618395 ZNF365Q70YC5 407 aa17.43■□□□□ 0.38
COL5A1-208ENST00000618395 FAM114A2Q9NRY5 505 aa17.43■□□□□ 0.38
COL5A1-208ENST00000618395 GABPB1Q06547 395 aaPredicted RBP17.43■□□□□ 0.38
COL5A1-208ENST00000618395 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL5A1-208ENST00000618395 VCXQ9H320 206 aa17.42■□□□□ 0.38
COL5A1-208ENST00000618395 CTAGE5O15320 804 aa17.42■□□□□ 0.38
COL5A1-208ENST00000618395 CAMK4Q16566 473 aa17.42■□□□□ 0.38
COL5A1-208ENST00000618395 CACNA2D3Q8IZS8 1091 aa17.42■□□□□ 0.38
COL5A1-208ENST00000618395 CCDC155Q8N6L0 562 aa17.42■□□□□ 0.38
COL5A1-208ENST00000618395 MXRA7P84157 204 aa17.42■□□□□ 0.38
COL5A1-208ENST00000618395 PDE1CQ14123 709 aaPredicted RBP17.42■□□□□ 0.38
COL5A1-208ENST00000618395 CKAP4Q07065 602 aaKnown RBP17.42■□□□□ 0.38
COL5A1-208ENST00000618395 FOXD1Q16676 465 aa17.42■□□□□ 0.38
COL5A1-208ENST00000618395 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 GBP1P32455 592 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 DBN1Q16643 649 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 HS1BP3Q53T59 392 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 VPS36Q86VN1 386 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 EHBP1Q8NDI1 1231 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 STMN4Q9H169 189 aaPredicted RBP17.41■□□□□ 0.38
COL5A1-208ENST00000618395 PKD2Q13563 968 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 CCDC150Q8NCX0 1101 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 SMC6Q96SB8 1091 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 UVSSAQ2YD98 709 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 TTC14Q96N46 770 aa17.41■□□□□ 0.38
COL5A1-208ENST00000618395 VPS8Q8N3P4 1428 aa17.4■□□□□ 0.38
COL5A1-208ENST00000618395 FERP16591 822 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms