RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SULT6B1Q6IMI4 303 aa15.46■□□□□ 0.07
SRRT-216ENST00000618262 ARHGEF25Q86VW2 580 aa15.46■□□□□ 0.07
SRRT-216ENST00000618262 PSMD1Q99460 953 aa15.46■□□□□ 0.07
SRRT-216ENST00000618262 NPC1L1Q9UHC9 1359 aa15.46■□□□□ 0.07
SRRT-216ENST00000618262 PTMAP06454 111 aaKnown RBP15.46■□□□□ 0.07
SRRT-216ENST00000618262 MED1Q15648 1581 aaPredicted RBP15.46■□□□□ 0.06
SRRT-216ENST00000618262 SBNO1A3KN83 1393 aa15.46■□□□□ 0.06
SRRT-216ENST00000618262 EVA1CP58658 441 aa15.45■□□□□ 0.06
SRRT-216ENST00000618262 MEX3CQ5U5Q3 659 aaKnown RBP15.45■□□□□ 0.06
SRRT-216ENST00000618262 RGS22Q8NE09 1264 aa15.45■□□□□ 0.06
SRRT-216ENST00000618262 KIF1AQ12756 1690 aa15.45■□□□□ 0.06
SRRT-216ENST00000618262 ARHGEF10O15013 1369 aa15.45■□□□□ 0.06
SRRT-216ENST00000618262 MAP2P11137 1827 aaKnown RBP15.45■□□□□ 0.06
SRRT-216ENST00000618262 PHLPP1O60346 1717 aa15.45■□□□□ 0.06
SRRT-216ENST00000618262 ANKRD24Q8TF21 1146 aa15.45■□□□□ 0.06
SRRT-216ENST00000618262 NGLY1Q96IV0 654 aa15.45■□□□□ 0.06
SRRT-216ENST00000618262 PNPLA6Q8IY17 1366 aa15.44■□□□□ 0.06
SRRT-216ENST00000618262 NBPF6Q5VWK0 638 aa15.43■□□□□ 0.06
SRRT-216ENST00000618262 NBPF4Q96M43 638 aa15.43■□□□□ 0.06
SRRT-216ENST00000618262 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
SRRT-216ENST00000618262 USP31Q70CQ4 1352 aa15.43■□□□□ 0.06
SRRT-216ENST00000618262 TRPM3Q9HCF6 1732 aaPredicted RBP15.43■□□□□ 0.06
SRRT-216ENST00000618262 ZNF526Q8TF50 670 aaPredicted RBP15.43■□□□□ 0.06
SRRT-216ENST00000618262 EYA1Q99502 592 aa15.43■□□□□ 0.06
SRRT-216ENST00000618262 LARP1Q6PKG0 1096 aaKnown RBP15.42■□□□□ 0.06
SRRT-216ENST00000618262 TOM1L2Q6ZVM7 507 aa15.42■□□□□ 0.06
SRRT-216ENST00000618262 USP19O94966 1318 aa15.42■□□□□ 0.06
SRRT-216ENST00000618262 APAF1O14727 1248 aa15.42■□□□□ 0.06
SRRT-216ENST00000618262 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
SRRT-216ENST00000618262 IL13P35225 146 aa15.42■□□□□ 0.06
SRRT-216ENST00000618262 PHACTR3Q96KR7 559 aa15.42■□□□□ 0.06
SRRT-216ENST00000618262 IP6K1Q92551 441 aa15.41■□□□□ 0.06
SRRT-216ENST00000618262 A0A0G2JS52 829 aa15.41■□□□□ 0.06
SRRT-216ENST00000618262 NUDCQ9Y266 331 aa15.41■□□□□ 0.06
SRRT-216ENST00000618262 VGLL3A8MV65 326 aa15.4■□□□□ 0.06
SRRT-216ENST00000618262 FLT4P35916 1363 aa15.4■□□□□ 0.06
SRRT-216ENST00000618262 PTMSP20962 102 aa15.39■□□□□ 0.05
SRRT-216ENST00000618262 PEAK1Q9H792 1746 aa15.39■□□□□ 0.05
SRRT-216ENST00000618262 NHSL1Q5SYE7 1610 aa15.38■□□□□ 0.05
SRRT-216ENST00000618262 ALS2Q96Q42 1657 aa15.38■□□□□ 0.05
SRRT-216ENST00000618262 CERS3Q8IU89 383 aa15.38■□□□□ 0.05
SRRT-216ENST00000618262 THUMPD2Q9BTF0 503 aaKnown RBP15.38■□□□□ 0.05
SRRT-216ENST00000618262 MARF1Q9Y4F3 1742 aaKnown RBP15.38■□□□□ 0.05
SRRT-216ENST00000618262 AATKQ6ZMQ8 1374 aa15.38■□□□□ 0.05
SRRT-216ENST00000618262 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
SRRT-216ENST00000618262 COL16A1Q07092 1604 aaPredicted RBP15.37■□□□□ 0.05
SRRT-216ENST00000618262 PRDM16Q9HAZ2 1276 aa15.37■□□□□ 0.05
SRRT-216ENST00000618262 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
SRRT-216ENST00000618262 NFAT5O94916 1531 aa15.36■□□□□ 0.05
SRRT-216ENST00000618262 CLGNO14967 610 aa15.36■□□□□ 0.05
SRRT-216ENST00000618262 TMEM51Q9NW97 253 aa15.36■□□□□ 0.05
SRRT-216ENST00000618262 JCADQ9P266 1359 aa15.36■□□□□ 0.05
SRRT-216ENST00000618262 ERBB3P21860 1342 aa15.36■□□□□ 0.05
SRRT-216ENST00000618262 IRX3P78415 501 aaPredicted RBP15.36■□□□□ 0.05
SRRT-216ENST00000618262 TCP11L2Q8N4U5 519 aa15.35■□□□□ 0.05
SRRT-216ENST00000618262 SRCAPQ6ZRS2 3230 aa15.35■□□□□ 0.05
SRRT-216ENST00000618262 AHDC1Q5TGY3 1603 aaPredicted RBP15.34■□□□□ 0.05
SRRT-216ENST00000618262 MCCP23508 829 aa15.34■□□□□ 0.05
SRRT-216ENST00000618262 GSE1Q14687 1217 aa15.34■□□□□ 0.05
SRRT-216ENST00000618262 FAM182BQ5T319 152 aa15.34■□□□□ 0.05
SRRT-216ENST00000618262 IPO9Q96P70 1041 aaKnown RBP15.34■□□□□ 0.05
SRRT-216ENST00000618262 LTN1O94822 1766 aa15.34■□□□□ 0.05
SRRT-216ENST00000618262 MAPK8IP3Q9UPT6 1336 aa15.34■□□□□ 0.05
SRRT-216ENST00000618262 LAS1LQ9Y4W2 734 aaKnown RBP15.33■□□□□ 0.05
SRRT-216ENST00000618262 ANKRD26Q9UPS8 1709 aa15.33■□□□□ 0.04
SRRT-216ENST00000618262 INSRP06213 1382 aa15.33■□□□□ 0.04
SRRT-216ENST00000618262 CAMTA1Q9Y6Y1 1673 aa15.33■□□□□ 0.04
SRRT-216ENST00000618262 OS9Q13438 667 aaPredicted RBP15.33■□□□□ 0.04
SRRT-216ENST00000618262 DDX54Q8TDD1 881 aaKnown RBP15.33■□□□□ 0.04
SRRT-216ENST00000618262 FBXO41Q8TF61 875 aa15.33■□□□□ 0.04
SRRT-216ENST00000618262 HDAC5Q9UQL6 1122 aa15.33■□□□□ 0.04
SRRT-216ENST00000618262 RGPD5Q99666 1765 aa15.32■□□□□ 0.04
SRRT-216ENST00000618262 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
SRRT-216ENST00000618262 CDCA7LQ96GN5 454 aa15.32■□□□□ 0.04
SRRT-216ENST00000618262 PDCL3Q9H2J4 239 aa15.32■□□□□ 0.04
SRRT-216ENST00000618262 LRP6O75581 1613 aa15.32■□□□□ 0.04
SRRT-216ENST00000618262 ILDR1Q86SU0 546 aaPredicted RBP15.32■□□□□ 0.04
SRRT-216ENST00000618262 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
SRRT-216ENST00000618262 USP21Q9UK80 565 aa15.32■□□□□ 0.04
SRRT-216ENST00000618262 ANP32AP39687 249 aaKnown RBP15.31■□□□□ 0.04
SRRT-216ENST00000618262 COL3A1P02461 1466 aaPredicted RBP15.31■□□□□ 0.04
SRRT-216ENST00000618262 CDK12Q9NYV4 1490 aaPredicted RBP15.31■□□□□ 0.04
SRRT-216ENST00000618262 SLIT3O75094 1523 aa15.31■□□□□ 0.04
SRRT-216ENST00000618262 FAM98CQ17RN3 349 aaKnown RBP15.3■□□□□ 0.04
SRRT-216ENST00000618262 MCM10Q7L590 875 aa15.3■□□□□ 0.04
SRRT-216ENST00000618262 RIPK4P57078 832 aa15.3■□□□□ 0.04
SRRT-216ENST00000618262 PHRF1Q9P1Y6 1649 aaKnown RBP15.3■□□□□ 0.04
SRRT-216ENST00000618262 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
SRRT-216ENST00000618262 AFF2P51816 1311 aa15.3■□□□□ 0.04
SRRT-216ENST00000618262 MTHFSDQ2M296 383 aaKnown RBP15.3■□□□□ 0.04
SRRT-216ENST00000618262 APPP05067 770 aa15.29■□□□□ 0.04
SRRT-216ENST00000618262 MIS18AQ9NYP9 233 aa15.29■□□□□ 0.04
SRRT-216ENST00000618262 RAPGEF4Q8WZA2 1011 aa15.29■□□□□ 0.04
SRRT-216ENST00000618262 RUNDC1Q96C34 613 aa15.29■□□□□ 0.04
SRRT-216ENST00000618262 PLEKHF1Q96S99 279 aa15.29■□□□□ 0.04
SRRT-216ENST00000618262 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
SRRT-216ENST00000618262 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
SRRT-216ENST00000618262 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.041e-9■■■□□ 15.8
SRRT-216ENST00000618262 RGPD2P0DJD1 1756 aa15.28■□□□□ 0.04
SRRT-216ENST00000618262 MPRIPQ6WCQ1 1025 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms