RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 ANP32AP39687 249 aaKnown RBP19.31■□□□□ 0.68
CBX5-206ENST00000618078 C8orf34Q49A92 452 aa19.31■□□□□ 0.68
CBX5-206ENST00000618078 RTF1Q92541 710 aaKnown RBP19.31■□□□□ 0.68
CBX5-206ENST00000618078 KRT28Q7Z3Y7 464 aa19.31■□□□□ 0.68
CBX5-206ENST00000618078 ZBTB40Q9NUA8 1239 aa19.31■□□□□ 0.68
CBX5-206ENST00000618078 RWDD1Q9H446 243 aaPredicted RBP19.3■□□□□ 0.68
CBX5-206ENST00000618078 NBPF6Q5VWK0 638 aa19.3■□□□□ 0.68
CBX5-206ENST00000618078 KCNH5Q8NCM2 988 aa19.3■□□□□ 0.68
CBX5-206ENST00000618078 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
CBX5-206ENST00000618078 NBPF4Q96M43 638 aa19.3■□□□□ 0.68
CBX5-206ENST00000618078 PDZRN3Q9UPQ7 1066 aa19.3■□□□□ 0.68
CBX5-206ENST00000618078 KIF1AQ12756 1690 aa19.3■□□□□ 0.68
CBX5-206ENST00000618078 SLIT3O75094 1523 aa19.29■□□□□ 0.68
CBX5-206ENST00000618078 GCP02774 474 aa19.29■□□□□ 0.68
CBX5-206ENST00000618078 MST1RQ04912 1400 aa19.29■□□□□ 0.68
CBX5-206ENST00000618078 MSH6P52701 1360 aa19.29■□□□□ 0.68
CBX5-206ENST00000618078 LRRC37A3O60309 1634 aa19.29■□□□□ 0.68
CBX5-206ENST00000618078 PHRF1Q9P1Y6 1649 aaKnown RBP19.28■□□□□ 0.68
CBX5-206ENST00000618078 FAM161AQ3B820 660 aa19.28■□□□□ 0.68
CBX5-206ENST00000618078 ARHGAP45Q92619 1136 aa19.28■□□□□ 0.68
CBX5-206ENST00000618078 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
CBX5-206ENST00000618078 TSPYL4Q9UJ04 414 aa19.28■□□□□ 0.68
CBX5-206ENST00000618078 ABCC4O15439 1325 aa19.28■□□□□ 0.68
CBX5-206ENST00000618078 KIAA0232Q92628 1395 aa19.27■□□□□ 0.67
CBX5-206ENST00000618078 ATF3P18847 181 aa19.26■□□□□ 0.67
CBX5-206ENST00000618078 GNAT3A8MTJ3 354 aa19.26■□□□□ 0.67
CBX5-206ENST00000618078 ARHGEF25Q86VW2 580 aa19.26■□□□□ 0.67
CBX5-206ENST00000618078 USP19O94966 1318 aa19.26■□□□□ 0.67
CBX5-206ENST00000618078 MAP3K5Q99683 1374 aa19.25■□□□□ 0.67
CBX5-206ENST00000618078 C1orf115Q9H7X2 142 aa19.25■□□□□ 0.67
CBX5-206ENST00000618078 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
CBX5-206ENST00000618078 ALS2Q96Q42 1657 aa19.24■□□□□ 0.67
CBX5-206ENST00000618078 ZBTB7BO15156 539 aaPredicted RBP19.24■□□□□ 0.67
CBX5-206ENST00000618078 HDAC1Q13547 482 aaPredicted RBP19.24■□□□□ 0.67
CBX5-206ENST00000618078 IPO9Q96P70 1041 aaKnown RBP19.24■□□□□ 0.67
CBX5-206ENST00000618078 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
CBX5-206ENST00000618078 RGPD5Q99666 1765 aa19.23■□□□□ 0.67
CBX5-206ENST00000618078 RGS12O14924 1447 aa19.23■□□□□ 0.67
CBX5-206ENST00000618078 KDM4FA0A1W2PPD8 638 aa19.23■□□□□ 0.67
CBX5-206ENST00000618078 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
CBX5-206ENST00000618078 MED1Q15648 1581 aaPredicted RBP19.22■□□□□ 0.67
CBX5-206ENST00000618078 XIRP1Q702N8 1843 aaKnown RBP19.22■□□□□ 0.67
CBX5-206ENST00000618078 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
CBX5-206ENST00000618078 ANP32EQ9BTT0 268 aa19.22■□□□□ 0.67
CBX5-206ENST00000618078 AXIN2Q9Y2T1 843 aa19.22■□□□□ 0.67
CBX5-206ENST00000618078 DCCP43146 1447 aa19.21■□□□□ 0.67
CBX5-206ENST00000618078 LMTK3Q96Q04 1460 aa19.2■□□□□ 0.66
CBX5-206ENST00000618078 ZC3H6P61129 1189 aaKnown RBP19.2■□□□□ 0.66
CBX5-206ENST00000618078 NOP58Q9Y2X3 529 aaKnown RBP19.2■□□□□ 0.66
CBX5-206ENST00000618078 STRCQ7RTU9 1775 aa19.2■□□□□ 0.66
CBX5-206ENST00000618078 ANKRD24Q8TF21 1146 aa19.2■□□□□ 0.66
CBX5-206ENST00000618078 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
CBX5-206ENST00000618078 SMC5Q8IY18 1101 aa19.19■□□□□ 0.66
CBX5-206ENST00000618078 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
CBX5-206ENST00000618078 HAP1P54257 671 aaPredicted RBP19.18■□□□□ 0.66
CBX5-206ENST00000618078 G2E3Q7L622 706 aa19.18■□□□□ 0.66
CBX5-206ENST00000618078 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
CBX5-206ENST00000618078 PXDNQ92626 1479 aa19.17■□□□□ 0.66
CBX5-206ENST00000618078 CADPS2Q86UW7 1296 aa19.17■□□□□ 0.66
CBX5-206ENST00000618078 LGR6Q9HBX8 967 aa19.17■□□□□ 0.66
CBX5-206ENST00000618078 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
CBX5-206ENST00000618078 CABLES1Q8TDN4 633 aa19.16■□□□□ 0.66
CBX5-206ENST00000618078 NCAPD2Q15021 1401 aa19.16■□□□□ 0.66
CBX5-206ENST00000618078 TAF7Q15545 349 aaPredicted RBP19.16■□□□□ 0.66
CBX5-206ENST00000618078 NECTIN2Q92692 538 aa19.16■□□□□ 0.66
CBX5-206ENST00000618078 FAM208AQ9UK61 1670 aaKnown RBP19.16■□□□□ 0.66
CBX5-206ENST00000618078 SEC24BO95487 1268 aa19.15■□□□□ 0.66
CBX5-206ENST00000618078 INTS3Q68E01 1043 aaKnown RBP19.15■□□□□ 0.66
CBX5-206ENST00000618078 CEMIPQ8WUJ3 1361 aa19.15■□□□□ 0.66
CBX5-206ENST00000618078 LMO7Q8WWI1 1683 aa19.14■□□□□ 0.66
CBX5-206ENST00000618078 CAMTA1Q9Y6Y1 1673 aa19.14■□□□□ 0.66
CBX5-206ENST00000618078 ZNF530Q6P9A1 599 aaPredicted RBP19.14■□□□□ 0.65
CBX5-206ENST00000618078 PTPRCP08575 1304 aa19.13■□□□□ 0.65
CBX5-206ENST00000618078 ZBTB47Q9UFB7 747 aaPredicted RBP19.13■□□□□ 0.65
CBX5-206ENST00000618078 NPHP3Q7Z494 1330 aa19.13■□□□□ 0.65
CBX5-206ENST00000618078 F6X3S4 739 aa19.13■□□□□ 0.65
CBX5-206ENST00000618078 ERBB3P21860 1342 aa19.13■□□□□ 0.65
CBX5-206ENST00000618078 MPRIPQ6WCQ1 1025 aa19.12■□□□□ 0.65
CBX5-206ENST00000618078 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
CBX5-206ENST00000618078 ZNF335Q9H4Z2 1342 aaPredicted RBP19.12■□□□□ 0.65
CBX5-206ENST00000618078 LNPKQ9C0E8 428 aa19.12■□□□□ 0.65
CBX5-206ENST00000618078 TNS3Q68CZ2 1445 aa19.12■□□□□ 0.65
CBX5-206ENST00000618078 NUCB1Q02818 461 aa19.11■□□□□ 0.65
CBX5-206ENST00000618078 PLEKHO1Q53GL0 409 aaPredicted RBP19.11■□□□□ 0.65
CBX5-206ENST00000618078 COL18A1P39060 1754 aa19.1■□□□□ 0.65
CBX5-206ENST00000618078 KDM3BQ7LBC6 1761 aa19.1■□□□□ 0.65
CBX5-206ENST00000618078 KCNQ3O43525 872 aa19.1■□□□□ 0.65
CBX5-206ENST00000618078 AKAP4Q5JQC9 854 aa19.1■□□□□ 0.65
CBX5-206ENST00000618078 MEIS3Q99687 375 aa19.09■□□□□ 0.65
CBX5-206ENST00000618078 CRYBG1Q9Y4K1 1723 aa19.09■□□□□ 0.65
CBX5-206ENST00000618078 CHRNA2Q15822 529 aa19.09■□□□□ 0.65
CBX5-206ENST00000618078 SLC4A10Q6U841 1118 aa19.09■□□□□ 0.65
CBX5-206ENST00000618078 BRINP3Q76B58 766 aa19.09■□□□□ 0.65
CBX5-206ENST00000618078 STK31Q9BXU1 1019 aa19.09■□□□□ 0.65
CBX5-206ENST00000618078 ATP10DQ9P241 1426 aa19.09■□□□□ 0.65
CBX5-206ENST00000618078 BABAM1Q9NWV8 329 aa19.08■□□□□ 0.65
CBX5-206ENST00000618078 CCDC30Q5VVM6 783 aa19.08■□□□□ 0.64
CBX5-206ENST00000618078 CHD1LQ86WJ1 897 aa19.08■□□□□ 0.64
CBX5-206ENST00000618078 SPATA31A3Q5VYP0 1347 aa19.08■□□□□ 0.64
CBX5-206ENST00000618078 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms