RNA–Protein interactions for RNA: ENST00000617719.4

ATXN3-251, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-251ENST00000617719 POLMQ9NP87 494 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-251ENST00000617719 ESPNB1AK53 854 aa7.98□□□□□ -1.13
ATXN3-251ENST00000617719 RNFT1Q5M7Z0 435 aa7.98□□□□□ -1.13
ATXN3-251ENST00000617719 PNMA1Q8ND90 353 aa7.98□□□□□ -1.13
ATXN3-251ENST00000617719 RNF217Q8TC41 542 aa7.98□□□□□ -1.13
ATXN3-251ENST00000617719 NANOS1Q8WY41 292 aaKnown RBP7.98□□□□□ -1.13
ATXN3-251ENST00000617719 COL25A1Q9BXS0 654 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-251ENST00000617719 ADH1AP07327 375 aa7.97□□□□□ -1.13
ATXN3-251ENST00000617719 SENP3-EIF4A1A0A087X0R7 540 aa7.96□□□□□ -1.14
ATXN3-251ENST00000617719 ITGA6P23229 1130 aa7.96□□□□□ -1.14
ATXN3-251ENST00000617719 FOXD4L5Q5VV16 416 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-251ENST00000617719 VWA5B2Q8N398 1253 aa7.96□□□□□ -1.14
ATXN3-251ENST00000617719 IL27Q8NEV9 243 aa7.96□□□□□ -1.14
ATXN3-251ENST00000617719 PCMTD1Q96MG8 357 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-251ENST00000617719 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
ATXN3-251ENST00000617719 CYLDQ9NQC7 956 aa7.96□□□□□ -1.14
ATXN3-251ENST00000617719 URB2Q14146 1524 aaKnown RBP7.96□□□□□ -1.14
ATXN3-251ENST00000617719 PTGIRP43119 386 aa7.95□□□□□ -1.14
ATXN3-251ENST00000617719 GJD4Q96KN9 370 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-251ENST00000617719 CDC14CA4D256 554 aa7.94□□□□□ -1.14
ATXN3-251ENST00000617719 SLC24A1O60721 1099 aa7.94□□□□□ -1.14
ATXN3-251ENST00000617719 NEUROD2Q15784 382 aa7.94□□□□□ -1.14
ATXN3-251ENST00000617719 TMEM259Q4ZIN3 620 aa7.94□□□□□ -1.14
ATXN3-251ENST00000617719 PRDM2Q13029 1718 aa7.93□□□□□ -1.14
ATXN3-251ENST00000617719 GIGYF1O75420 1035 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-251ENST00000617719 FBXO45P0C2W1 286 aa7.93□□□□□ -1.14
ATXN3-251ENST00000617719 PCDHB9Q9Y5E1 797 aa7.93□□□□□ -1.14
ATXN3-251ENST00000617719 ZBBXA8MT70 800 aa7.92□□□□□ -1.14
ATXN3-251ENST00000617719 GSK3AP49840 483 aa7.92□□□□□ -1.14
ATXN3-251ENST00000617719 WHAMMQ8TF30 809 aa7.92□□□□□ -1.14
ATXN3-251ENST00000617719 SV2AQ7L0J3 742 aa7.91□□□□□ -1.14
ATXN3-251ENST00000617719 SEPT12Q8IYM1 358 aa7.91□□□□□ -1.14
ATXN3-251ENST00000617719 CUEDC1Q9NWM3 386 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-251ENST00000617719 ABCC8Q09428 1581 aa7.91□□□□□ -1.14
ATXN3-251ENST00000617719 ZNF385CQ66K41 422 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-251ENST00000617719 ADAMTS8Q9UP79 889 aa7.9□□□□□ -1.14
ATXN3-251ENST00000617719 RHOQP17081 205 aa7.89□□□□□ -1.15
ATXN3-251ENST00000617719 KCNMA1Q12791 1236 aa7.89□□□□□ -1.15
ATXN3-251ENST00000617719 LYSMD3Q7Z3D4 306 aa7.89□□□□□ -1.15
ATXN3-251ENST00000617719 PRICKLE2Q7Z3G6 844 aa7.89□□□□□ -1.15
ATXN3-251ENST00000617719 TOPBP1Q92547 1522 aa7.88□□□□□ -1.15
ATXN3-251ENST00000617719 GPR37L1O60883 481 aa7.88□□□□□ -1.15
ATXN3-251ENST00000617719 SLURP2P0DP57 97 aa7.88□□□□□ -1.15
ATXN3-251ENST00000617719 SVOPQ8N4V2 548 aa7.88□□□□□ -1.15
ATXN3-251ENST00000617719 ATP5J2-PTCD1G3V325 749 aa7.87□□□□□ -1.15
ATXN3-251ENST00000617719 MEN1O00255 615 aa7.87□□□□□ -1.15
ATXN3-251ENST00000617719 RNF144AP50876 292 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-251ENST00000617719 BRPF1P55201 1214 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-251ENST00000617719 IFT140Q96RY7 1462 aa7.87□□□□□ -1.15
ATXN3-251ENST00000617719 A0A1W2PRU2 124 aa7.86□□□□□ -1.15
ATXN3-251ENST00000617719 SCTRP47872 440 aa7.86□□□□□ -1.15
ATXN3-251ENST00000617719 GAS6Q14393 721 aa7.86□□□□□ -1.15
ATXN3-251ENST00000617719 KCTD17Q8N5Z5 321 aa7.86□□□□□ -1.15
ATXN3-251ENST00000617719 DNMBPQ6XZF7 1577 aa7.85□□□□□ -1.15
ATXN3-251ENST00000617719 ERVK-9P63128 1117 aa7.85□□□□□ -1.15
ATXN3-251ENST00000617719 ARHGEF15O94989 841 aa7.84□□□□□ -1.15
ATXN3-251ENST00000617719 ADAMTS2O95450 1211 aa7.84□□□□□ -1.15
ATXN3-251ENST00000617719 RASSF7Q02833 373 aa7.84□□□□□ -1.15
ATXN3-251ENST00000617719 NR1H3Q13133 447 aa7.84□□□□□ -1.15
ATXN3-251ENST00000617719 CC2D2BQ6DHV5 1058 aa7.84□□□□□ -1.15
ATXN3-251ENST00000617719 MTMR14Q8NCE2 650 aa7.84□□□□□ -1.15
ATXN3-251ENST00000617719 ZNF608Q9ULD9 1512 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-251ENST00000617719 TTBK1Q5TCY1 1321 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-251ENST00000617719 SNRKQ9NRH2 765 aa7.83□□□□□ -1.16
ATXN3-251ENST00000617719 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
ATXN3-251ENST00000617719 SUPT5HO00267 1087 aaKnown RBP7.82□□□□□ -1.16
ATXN3-251ENST00000617719 GDF11O95390 407 aa7.82□□□□□ -1.16
ATXN3-251ENST00000617719 POU4F2Q12837 409 aa7.82□□□□□ -1.16
ATXN3-251ENST00000617719 LYPD4Q6UWN0 246 aa7.82□□□□□ -1.16
ATXN3-251ENST00000617719 TMEM151AQ8N4L1 468 aa7.82□□□□□ -1.16
ATXN3-251ENST00000617719 ZNF837Q96EG3 531 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-251ENST00000617719 TARBP1Q13395 1621 aaKnown RBP7.81□□□□□ -1.16
ATXN3-251ENST00000617719 POLA1P09884 1462 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-251ENST00000617719 GPR25O00155 361 aa7.81□□□□□ -1.16
ATXN3-251ENST00000617719 GPC1P35052 558 aa7.81□□□□□ -1.16
ATXN3-251ENST00000617719 DBN1Q16643 649 aa7.81□□□□□ -1.16
ATXN3-251ENST00000617719 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
ATXN3-251ENST00000617719 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
ATXN3-251ENST00000617719 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
ATXN3-251ENST00000617719 SRSF11Q05519 484 aaKnown RBP7.8□□□□□ -1.16
ATXN3-251ENST00000617719 CLN3Q13286 438 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 SLC27A3Q5K4L6 730 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 TRIM22Q8IYM9 498 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 BANK1Q8NDB2 785 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 TRIM52Q96A61 297 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 NLRP3Q96P20 1036 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 GRIP2Q9C0E4 1043 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 NDUFB9Q9Y6M9 179 aa7.8□□□□□ -1.16
ATXN3-251ENST00000617719 SOGA1O94964 1423 aa7.79□□□□□ -1.16
ATXN3-251ENST00000617719 TRAK2O60296 914 aa7.79□□□□□ -1.16
ATXN3-251ENST00000617719 IRS1P35568 1242 aa7.79□□□□□ -1.16
ATXN3-251ENST00000617719 CYP2U1Q7Z449 544 aa7.79□□□□□ -1.16
ATXN3-251ENST00000617719 GAS2L1Q99501 681 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-251ENST00000617719 RAB6BQ9NRW1 208 aa7.79□□□□□ -1.16
ATXN3-251ENST00000617719 DYRK1BQ9Y463 629 aa7.79□□□□□ -1.16
ATXN3-251ENST00000617719 AQRO60306 1485 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATXN3-251ENST00000617719 CUX1P39880 1505 aa7.78□□□□□ -1.16
ATXN3-251ENST00000617719 RNF225M0QZC1 329 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-251ENST00000617719 CELA2BP08218 269 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms