RNA–Protein interactions for RNA: ENST00000616382.4

FMR1-215, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-215ENST00000616382 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
FMR1-215ENST00000616382 DDX54Q8TDD1 881 aaKnown RBP18.94■□□□□ 0.62
FMR1-215ENST00000616382 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
FMR1-215ENST00000616382 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
FMR1-215ENST00000616382 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
FMR1-215ENST00000616382 PTF1AQ7RTS3 328 aa18.93■□□□□ 0.62
FMR1-215ENST00000616382 ACSBG1Q96GR2 724 aa18.93■□□□□ 0.62
FMR1-215ENST00000616382 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
FMR1-215ENST00000616382 KCNQ2O43526 872 aa18.92■□□□□ 0.62
FMR1-215ENST00000616382 TATP17735 454 aaPredicted RBP18.92■□□□□ 0.62
FMR1-215ENST00000616382 TXNRD1Q16881 649 aa18.92■□□□□ 0.62
FMR1-215ENST00000616382 NHSQ6T4R5 1651 aa18.9■□□□□ 0.62
FMR1-215ENST00000616382 MTHFSP49914 203 aa18.9■□□□□ 0.62
FMR1-215ENST00000616382 PROM2Q8N271 834 aa18.9■□□□□ 0.62
FMR1-215ENST00000616382 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.62
FMR1-215ENST00000616382 STK32BQ9NY57 414 aa18.89■□□□□ 0.62
FMR1-215ENST00000616382 PPP2R1AP30153 589 aa18.87■□□□□ 0.61
FMR1-215ENST00000616382 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
FMR1-215ENST00000616382 SPON1Q9HCB6 807 aa18.87■□□□□ 0.61
FMR1-215ENST00000616382 KAT6BQ8WYB5 2073 aa18.87■□□□□ 0.61
FMR1-215ENST00000616382 MEGF6O75095 1541 aa18.87■□□□□ 0.61
FMR1-215ENST00000616382 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
FMR1-215ENST00000616382 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
FMR1-215ENST00000616382 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
FMR1-215ENST00000616382 RGPD2P0DJD1 1756 aa18.85■□□□□ 0.61
FMR1-215ENST00000616382 SLC15A2Q16348 729 aa18.85■□□□□ 0.61
FMR1-215ENST00000616382 SLC27A3Q5K4L6 730 aa18.85■□□□□ 0.61
FMR1-215ENST00000616382 SYTL4Q96C24 671 aaPredicted RBP18.85■□□□□ 0.61
FMR1-215ENST00000616382 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
FMR1-215ENST00000616382 PRIM1P49642 420 aaKnown RBP18.84■□□□□ 0.61
FMR1-215ENST00000616382 RALBP1Q15311 655 aa18.84■□□□□ 0.61
FMR1-215ENST00000616382 ANO8Q9HCE9 1232 aaPredicted RBP18.84■□□□□ 0.61
FMR1-215ENST00000616382 ANKRD26Q9UPS8 1709 aa18.82■□□□□ 0.6
FMR1-215ENST00000616382 MAP2P11137 1827 aaKnown RBP18.82■□□□□ 0.6
FMR1-215ENST00000616382 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
FMR1-215ENST00000616382 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
FMR1-215ENST00000616382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.82■□□□□ 0.62e-7■■■□□ 15.6
FMR1-215ENST00000616382 NCAPD2Q15021 1401 aa18.81■□□□□ 0.6
FMR1-215ENST00000616382 BTAF1O14981 1849 aa18.81■□□□□ 0.6
FMR1-215ENST00000616382 EYA1Q99502 592 aa18.81■□□□□ 0.6
FMR1-215ENST00000616382 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
FMR1-215ENST00000616382 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
FMR1-215ENST00000616382 ANP32CO43423 234 aa18.79■□□□□ 0.6
FMR1-215ENST00000616382 SHANK3Q9BYB0 1731 aa18.77■□□□□ 0.6
FMR1-215ENST00000616382 CYP27B1O15528 508 aa18.76■□□□□ 0.59
FMR1-215ENST00000616382 IL13P35225 146 aa18.76■□□□□ 0.59
FMR1-215ENST00000616382 NKX1-1Q15270 411 aaPredicted RBP18.76■□□□□ 0.59
FMR1-215ENST00000616382 DIEXFQ68CQ4 756 aaKnown RBP18.76■□□□□ 0.59
FMR1-215ENST00000616382 LRRC4BQ9NT99 713 aa18.76■□□□□ 0.59
FMR1-215ENST00000616382 MYBBP1AQ9BQG0 1328 aaKnown RBP18.75■□□□□ 0.59
FMR1-215ENST00000616382 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
FMR1-215ENST00000616382 MTFR1LQ9H019 292 aa18.75■□□□□ 0.59
FMR1-215ENST00000616382 DOT1LQ8TEK3 1739 aa18.75■□□□□ 0.59
FMR1-215ENST00000616382 IFNL2Q8IZJ0 200 aa18.74■□□□□ 0.59
FMR1-215ENST00000616382 SMARCC1Q92922 1105 aaPredicted RBP18.74■□□□□ 0.59
FMR1-215ENST00000616382 CFAP53Q96M91 514 aa18.74■□□□□ 0.59
FMR1-215ENST00000616382 CCNL1Q9UK58 526 aaPredicted RBP18.74■□□□□ 0.59
FMR1-215ENST00000616382 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
FMR1-215ENST00000616382 ZBTB7AO95365 584 aa18.73■□□□□ 0.59
FMR1-215ENST00000616382 CCDC184Q52MB2 194 aa18.73■□□□□ 0.59
FMR1-215ENST00000616382 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
FMR1-215ENST00000616382 CASZ1Q86V15 1759 aa18.73■□□□□ 0.59
FMR1-215ENST00000616382 PAPPAQ13219 1627 aa18.72■□□□□ 0.59
FMR1-215ENST00000616382 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
FMR1-215ENST00000616382 MPRIPQ6WCQ1 1025 aa18.72■□□□□ 0.59
FMR1-215ENST00000616382 SLC16A10Q8TF71 515 aa18.72■□□□□ 0.59
FMR1-215ENST00000616382 PKD1L3Q7Z443 1732 aa18.72■□□□□ 0.59
FMR1-215ENST00000616382 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
FMR1-215ENST00000616382 AEBP1Q8IUX7 1158 aa18.71■□□□□ 0.59
FMR1-215ENST00000616382 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
FMR1-215ENST00000616382 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.58
FMR1-215ENST00000616382 HMOX1P09601 288 aa18.71■□□□□ 0.58
FMR1-215ENST00000616382 ZNF827Q17R98 1081 aa18.71■□□□□ 0.58
FMR1-215ENST00000616382 AMOTQ4VCS5 1084 aa18.71■□□□□ 0.58
FMR1-215ENST00000616382 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.58
FMR1-215ENST00000616382 PDGFDQ9GZP0 370 aaPredicted RBP18.71■□□□□ 0.58
FMR1-215ENST00000616382 PHKG2P15735 406 aa18.7■□□□□ 0.58
FMR1-215ENST00000616382 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
FMR1-215ENST00000616382 ATF5Q9Y2D1 282 aaPredicted RBP18.7■□□□□ 0.58
FMR1-215ENST00000616382 LY75O60449 1722 aa18.69■□□□□ 0.58
FMR1-215ENST00000616382 PTGER2P43116 358 aa18.68■□□□□ 0.58
FMR1-215ENST00000616382 PALLDQ8WX93 1383 aa18.68■□□□□ 0.58
FMR1-215ENST00000616382 TMOD3Q9NYL9 352 aa18.67■□□□□ 0.58
FMR1-215ENST00000616382 U2AF1L5P0DN76 240 aaPredicted RBP18.67■□□□□ 0.58
FMR1-215ENST00000616382 U2AF1Q01081 240 aaKnown RBP eCLIP18.67■□□□□ 0.58
FMR1-215ENST00000616382 PIGBQ92521 554 aa18.67■□□□□ 0.58
FMR1-215ENST00000616382 NUDCQ9Y266 331 aa18.67■□□□□ 0.58
FMR1-215ENST00000616382 COL3A1P02461 1466 aaPredicted RBP18.66■□□□□ 0.58
FMR1-215ENST00000616382 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
FMR1-215ENST00000616382 KCNQ4P56696 695 aa18.65■□□□□ 0.58
FMR1-215ENST00000616382 FLAD1Q8NFF5 587 aa18.65■□□□□ 0.58
FMR1-215ENST00000616382 DCAF5Q96JK2 942 aa18.65■□□□□ 0.58
FMR1-215ENST00000616382 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
FMR1-215ENST00000616382 POLD1P28340 1107 aa18.64■□□□□ 0.57
FMR1-215ENST00000616382 MIER1Q8N108 512 aa18.64■□□□□ 0.57
FMR1-215ENST00000616382 QSER1Q2KHR3 1735 aa18.64■□□□□ 0.57
FMR1-215ENST00000616382 SGIP1Q9BQI5 828 aa18.63■□□□□ 0.57
FMR1-215ENST00000616382 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
FMR1-215ENST00000616382 ZNF530Q6P9A1 599 aaPredicted RBP18.63■□□□□ 0.57
FMR1-215ENST00000616382 ARXQ96QS3 562 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms