RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 FMNL2Q96PY5 1086 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 CAMSAP2Q08AD1 1489 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 SOGA3Q5TF21 947 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 CHD1LQ86WJ1 897 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 DUSP27Q5VZP5 1158 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 ZPR1O75312 459 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
TNXB-208ENST00000611016 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
TNXB-208ENST00000611016 NOM1Q5C9Z4 860 aaKnown RBP18.53■□□□□ 0.56
TNXB-208ENST00000611016 MAGEC2Q9UBF1 373 aaPredicted RBP18.53■□□□□ 0.56
TNXB-208ENST00000611016 PRPF40AO75400 957 aaKnown RBP18.53■□□□□ 0.56
TNXB-208ENST00000611016 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
TNXB-208ENST00000611016 ABCA10Q8WWZ4 1543 aa18.53■□□□□ 0.56
TNXB-208ENST00000611016 CWC27Q6UX04 472 aaKnown RBP18.53■□□□□ 0.56
TNXB-208ENST00000611016 IDH1O75874 414 aaKnown RBP18.53■□□□□ 0.56
TNXB-208ENST00000611016 NASPP49321 788 aaPredicted RBP18.52■□□□□ 0.56
TNXB-208ENST00000611016 TXLNBQ8N3L3 684 aa18.52■□□□□ 0.56
TNXB-208ENST00000611016 CAVIN1Q6NZI2 390 aaKnown RBP18.52■□□□□ 0.56
TNXB-208ENST00000611016 MPRIPQ6WCQ1 1025 aa18.52■□□□□ 0.56
TNXB-208ENST00000611016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.56
TNXB-208ENST00000611016 TTLL5Q6EMB2 1281 aa18.52■□□□□ 0.55
TNXB-208ENST00000611016 KIF14Q15058 1648 aa18.52■□□□□ 0.55
TNXB-208ENST00000611016 SMC2O95347 1197 aa18.52■□□□□ 0.55
TNXB-208ENST00000611016 METTL24Q5JXM2 366 aa18.52■□□□□ 0.55
TNXB-208ENST00000611016 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
TNXB-208ENST00000611016 NFKBIBQ15653 356 aa18.51■□□□□ 0.55
TNXB-208ENST00000611016 HSP90AB2PQ58FF8 381 aa18.51■□□□□ 0.55
TNXB-208ENST00000611016 ABCF2Q9UG63 623 aa18.51■□□□□ 0.55
TNXB-208ENST00000611016 DACH1Q9UI36 760 aa18.51■□□□□ 0.55
TNXB-208ENST00000611016 UBAC1Q9BSL1 405 aa18.51■□□□□ 0.55
TNXB-208ENST00000611016 ZHX3Q9H4I2 956 aa18.51■□□□□ 0.55
TNXB-208ENST00000611016 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
TNXB-208ENST00000611016 TRIM5Q9C035 493 aa18.5■□□□□ 0.55
TNXB-208ENST00000611016 NUTM1Q86Y26 1132 aa18.5■□□□□ 0.55
TNXB-208ENST00000611016 TSPY26PQ9H489 355 aa18.5■□□□□ 0.55
TNXB-208ENST00000611016 CTNNA3Q9UI47 895 aa18.5■□□□□ 0.55
TNXB-208ENST00000611016 MYD88Q99836 296 aa18.5■□□□□ 0.55
TNXB-208ENST00000611016 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
TNXB-208ENST00000611016 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
TNXB-208ENST00000611016 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
TNXB-208ENST00000611016 BLOC1S2Q6QNY1 142 aa18.49■□□□□ 0.55
TNXB-208ENST00000611016 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
TNXB-208ENST00000611016 NAIPQ13075 1403 aa18.49■□□□□ 0.55
TNXB-208ENST00000611016 RPAP2Q8IXW5 612 aaPredicted RBP18.49■□□□□ 0.55
TNXB-208ENST00000611016 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
TNXB-208ENST00000611016 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
TNXB-208ENST00000611016 WASLO00401 505 aaPredicted RBP18.48■□□□□ 0.55
TNXB-208ENST00000611016 IDI1Q13907 227 aa18.48■□□□□ 0.55
TNXB-208ENST00000611016 AIDAQ96BJ3 306 aa18.48■□□□□ 0.55
TNXB-208ENST00000611016 PATL2C9JE40 543 aaKnown RBP18.48■□□□□ 0.55
TNXB-208ENST00000611016 LARP1Q6PKG0 1096 aaKnown RBP18.48■□□□□ 0.55
TNXB-208ENST00000611016 PCF11O94913 1555 aaKnown RBP18.48■□□□□ 0.55
TNXB-208ENST00000611016 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
TNXB-208ENST00000611016 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 JAKMIP1Q96N16 626 aaKnown RBP18.47■□□□□ 0.55
TNXB-208ENST00000611016 TMOD2Q9NZR1 351 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 EXOC6BQ9Y2D4 811 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 EMILIN1Q9Y6C2 1016 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 TRAK2O60296 914 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 PDRG1Q9NUG6 133 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 ADGRF5Q8IZF2 1346 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 ME1P48163 572 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
TNXB-208ENST00000611016 HMGN5P82970 282 aaKnown RBP18.46■□□□□ 0.55
TNXB-208ENST00000611016 SYCP1Q15431 976 aa18.46■□□□□ 0.55
TNXB-208ENST00000611016 LUC7LQ9NQ29 371 aaKnown RBP18.46■□□□□ 0.55
TNXB-208ENST00000611016 LARP1BQ659C4 914 aaKnown RBP18.46■□□□□ 0.55
TNXB-208ENST00000611016 NOL7Q9UMY1 257 aaKnown RBP18.46■□□□□ 0.55
TNXB-208ENST00000611016 MPHOSPH10O00566 681 aaKnown RBP18.46■□□□□ 0.55
TNXB-208ENST00000611016 SLFN5Q08AF3 891 aa18.46■□□□□ 0.55
TNXB-208ENST00000611016 WDR33Q9C0J8 1336 aaKnown RBP18.45■□□□□ 0.54
TNXB-208ENST00000611016 CDKL5O76039 1030 aa18.45■□□□□ 0.54
TNXB-208ENST00000611016 CAVIN4Q5BKX8 364 aa18.45■□□□□ 0.54
TNXB-208ENST00000611016 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
TNXB-208ENST00000611016 AKAP2Q9Y2D5 859 aa18.45■□□□□ 0.54
TNXB-208ENST00000611016 ANKIB1Q9P2G1 1089 aa18.45■□□□□ 0.54
TNXB-208ENST00000611016 ZSCAN31Q96LW9 406 aaPredicted RBP18.45■□□□□ 0.54
TNXB-208ENST00000611016 CWC15Q9P013 229 aaKnown RBP18.45■□□□□ 0.54
TNXB-208ENST00000611016 ABCC5O15440 1437 aa18.45■□□□□ 0.54
TNXB-208ENST00000611016 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
TNXB-208ENST00000611016 CUL7Q14999 1698 aa18.44■□□□□ 0.54
TNXB-208ENST00000611016 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
TNXB-208ENST00000611016 EXOC5O00471 708 aa18.44■□□□□ 0.54
TNXB-208ENST00000611016 USP5P45974 858 aa18.44■□□□□ 0.54
TNXB-208ENST00000611016 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
TNXB-208ENST00000611016 IMMTQ16891 758 aaKnown RBP18.44■□□□□ 0.54
TNXB-208ENST00000611016 CIZ1Q9ULV3 898 aaPredicted RBP18.44■□□□□ 0.54
TNXB-208ENST00000611016 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
TNXB-208ENST00000611016 IFIT1P09914 478 aaKnown RBP18.43■□□□□ 0.54
TNXB-208ENST00000611016 STIM1Q13586 685 aa18.43■□□□□ 0.54
TNXB-208ENST00000611016 PAF1Q8N7H5 531 aa18.43■□□□□ 0.54
TNXB-208ENST00000611016 K7ELQ4 463 aaPredicted RBP18.43■□□□□ 0.54
TNXB-208ENST00000611016 ZNF76P36508 570 aa18.43■□□□□ 0.54
TNXB-208ENST00000611016 KRT32Q14532 448 aa18.43■□□□□ 0.54
TNXB-208ENST00000611016 FAM13BQ9NYF5 915 aa18.43■□□□□ 0.54
TNXB-208ENST00000611016 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
TNXB-208ENST00000611016 TRMT112Q9UI30 125 aaKnown RBP18.43■□□□□ 0.54
TNXB-208ENST00000611016 DENND4BO75064 1496 aaPredicted RBP18.42■□□□□ 0.54
TNXB-208ENST00000611016 SSBP05455 408 aaKnown RBP eCLIP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms