RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 XP32Q5T750 250 aa9.39□□□□□ -0.91
TARDBP-212ENST00000611008 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
TARDBP-212ENST00000611008 KDF1Q8NAX2 398 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-212ENST00000611008 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-212ENST00000611008 IGF1RP08069 1367 aa9.38□□□□□ -0.91
TARDBP-212ENST00000611008 GPR25O00155 361 aa9.38□□□□□ -0.91
TARDBP-212ENST00000611008 BCRP11274 1271 aa9.38□□□□□ -0.91
TARDBP-212ENST00000611008 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-212ENST00000611008 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
TARDBP-212ENST00000611008 TRIM52Q96A61 297 aa9.38□□□□□ -0.91
TARDBP-212ENST00000611008 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
TARDBP-212ENST00000611008 GALNT6Q8NCL4 622 aa9.37□□□□□ -0.91
TARDBP-212ENST00000611008 ATP1B4Q9UN42 357 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-212ENST00000611008 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
TARDBP-212ENST00000611008 ESPNB1AK53 854 aa9.34□□□□□ -0.91
TARDBP-212ENST00000611008 H7C1W4 665 aa9.34□□□□□ -0.91
TARDBP-212ENST00000611008 DBN1Q16643 649 aa9.34□□□□□ -0.91
TARDBP-212ENST00000611008 PPP2R2DQ66LE6 453 aa9.34□□□□□ -0.91
TARDBP-212ENST00000611008 TRERF1Q96PN7 1200 aa9.34□□□□□ -0.91
TARDBP-212ENST00000611008 AP1G2O75843 785 aa9.33□□□□□ -0.92
TARDBP-212ENST00000611008 ITGB2P05107 769 aa9.33□□□□□ -0.92
TARDBP-212ENST00000611008 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
TARDBP-212ENST00000611008 SEPT12Q8IYM1 358 aa9.33□□□□□ -0.92
TARDBP-212ENST00000611008 SLC24A3Q9HC58 644 aa9.33□□□□□ -0.92
TARDBP-212ENST00000611008 ATP5J2-PTCD1G3V325 749 aa9.32□□□□□ -0.92
TARDBP-212ENST00000611008 MEN1O00255 615 aa9.32□□□□□ -0.92
TARDBP-212ENST00000611008 PROCP04070 461 aa9.32□□□□□ -0.92
TARDBP-212ENST00000611008 GTPBP3Q969Y2 492 aaKnown RBP9.32□□□□□ -0.92
TARDBP-212ENST00000611008 ACDQ96AP0 544 aa9.32□□□□□ -0.92
TARDBP-212ENST00000611008 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
TARDBP-212ENST00000611008 DYRK1BQ9Y463 629 aa9.32□□□□□ -0.92
TARDBP-212ENST00000611008 GPC1P35052 558 aa9.31□□□□□ -0.92
TARDBP-212ENST00000611008 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
TARDBP-212ENST00000611008 GAS2L1Q99501 681 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-212ENST00000611008 LRRC4BQ9NT99 713 aa9.31□□□□□ -0.92
TARDBP-212ENST00000611008 MX2P20592 715 aa9.3□□□□□ -0.92
TARDBP-212ENST00000611008 FBXO31Q5XUX0 539 aaPredicted RBP9.3□□□□□ -0.92
TARDBP-212ENST00000611008 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
TARDBP-212ENST00000611008 K7ELQ4 463 aaPredicted RBP9.28□□□□□ -0.92
TARDBP-212ENST00000611008 POU4F2Q12837 409 aa9.28□□□□□ -0.92
TARDBP-212ENST00000611008 SLC27A3Q5K4L6 730 aa9.28□□□□□ -0.92
TARDBP-212ENST00000611008 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
TARDBP-212ENST00000611008 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
TARDBP-212ENST00000611008 SH3D19Q5HYK7 790 aa9.27□□□□□ -0.93
TARDBP-212ENST00000611008 NLRP3Q96P20 1036 aa9.27□□□□□ -0.93
TARDBP-212ENST00000611008 OIP5O43482 229 aa9.26□□□□□ -0.93
TARDBP-212ENST00000611008 HMX1Q9NP08 348 aaPredicted RBP9.26□□□□□ -0.93
TARDBP-212ENST00000611008 USP17L8P0C7I0 530 aa9.25□□□□□ -0.93
TARDBP-212ENST00000611008 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
TARDBP-212ENST00000611008 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
TARDBP-212ENST00000611008 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
TARDBP-212ENST00000611008 OXCT2Q9BYC2 517 aaPredicted RBP9.24□□□□□ -0.93
TARDBP-212ENST00000611008 NUCKS1Q9H1E3 243 aaKnown RBP9.24□□□□□ -0.93
TARDBP-212ENST00000611008 MAP2K3P46734 347 aa9.23□□□□□ -0.93
TARDBP-212ENST00000611008 SNRPNP63162 240 aaKnown RBP9.23□□□□□ -0.93
TARDBP-212ENST00000611008 TIMMDC1Q9NPL8 285 aa9.23□□□□□ -0.93
TARDBP-212ENST00000611008 MKL2Q9ULH7 1088 aa9.23□□□□□ -0.93
TARDBP-212ENST00000611008 BAG6P46379 1132 aa9.22□□□□□ -0.93
TARDBP-212ENST00000611008 WDR44Q5JSH3 913 aa9.22□□□□□ -0.93
TARDBP-212ENST00000611008 CC2D2BQ6DHV5 1058 aa9.22□□□□□ -0.93
TARDBP-212ENST00000611008 CCDC125Q86Z20 511 aa9.22□□□□□ -0.93
TARDBP-212ENST00000611008 GRIP2Q9C0E4 1043 aa9.22□□□□□ -0.93
TARDBP-212ENST00000611008 PCDHB9Q9Y5E1 797 aa9.22□□□□□ -0.93
TARDBP-212ENST00000611008 KRBA1A5PL33 1030 aa9.21□□□□□ -0.94
TARDBP-212ENST00000611008 F11P03951 625 aa9.21□□□□□ -0.94
TARDBP-212ENST00000611008 ALYREFQ86V81 257 aaKnown RBP9.21□□□□□ -0.94
TARDBP-212ENST00000611008 SPATA31C2B4DYI2 1134 aa9.2□□□□□ -0.94
TARDBP-212ENST00000611008 ERVK-9P63128 1117 aa9.2□□□□□ -0.94
TARDBP-212ENST00000611008 CLN3Q13286 438 aa9.2□□□□□ -0.94
TARDBP-212ENST00000611008 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
TARDBP-212ENST00000611008 DDRGK1Q96HY6 314 aa9.2□□□□□ -0.94
TARDBP-212ENST00000611008 CFHR5Q9BXR6 569 aa9.2□□□□□ -0.94
TARDBP-212ENST00000611008 ZBBXA8MT70 800 aa9.19□□□□□ -0.94
TARDBP-212ENST00000611008 RNF20Q5VTR2 975 aa9.19□□□□□ -0.94
TARDBP-212ENST00000611008 CYP2U1Q7Z449 544 aa9.19□□□□□ -0.94
TARDBP-212ENST00000611008 RRAGCQ9HB90 399 aa9.19□□□□□ -0.94
TARDBP-212ENST00000611008 SHISA8B8ZZ34 492 aa9.18□□□□□ -0.94
TARDBP-212ENST00000611008 WASLO00401 505 aaPredicted RBP9.18□□□□□ -0.94
TARDBP-212ENST00000611008 FURINP09958 794 aa9.18□□□□□ -0.94
TARDBP-212ENST00000611008 Q8N3U1 123 aa9.18□□□□□ -0.94
TARDBP-212ENST00000611008 PHF24Q9UPV7 400 aa9.18□□□□□ -0.94
TARDBP-212ENST00000611008 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
TARDBP-212ENST00000611008 GDF2Q9UK05 429 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-212ENST00000611008 EDARADDQ8WWZ3 215 aa9.16□□□□□ -0.94
TARDBP-212ENST00000611008 KLRG1Q96E93 195 aa9.16□□□□□ -0.94
TARDBP-212ENST00000611008 TRIM34Q9BYJ4 488 aa9.16□□□□□ -0.94
TARDBP-212ENST00000611008 FAM117AQ9C073 453 aa9.16□□□□□ -0.94
TARDBP-212ENST00000611008 ARHGEF10LQ9HCE6 1279 aa9.16□□□□□ -0.94
TARDBP-212ENST00000611008 COL8A1P27658 744 aa9.15□□□□□ -0.94
TARDBP-212ENST00000611008 RFC5P40937 340 aa9.15□□□□□ -0.94
TARDBP-212ENST00000611008 KDM4CQ9H3R0 1056 aa9.15□□□□□ -0.94
TARDBP-212ENST00000611008 GPAMQ9HCL2 828 aa9.15□□□□□ -0.94
TARDBP-212ENST00000611008 C1orf229Q6ZS94 237 aaPredicted RBP9.14□□□□□ -0.95
TARDBP-212ENST00000611008 FBXO45P0C2W1 286 aa9.13□□□□□ -0.95
TARDBP-212ENST00000611008 AMPD1P23109 780 aa9.13□□□□□ -0.95
TARDBP-212ENST00000611008 SCTRP47872 440 aa9.13□□□□□ -0.95
TARDBP-212ENST00000611008 GRIN2CQ14957 1233 aa9.13□□□□□ -0.95
TARDBP-212ENST00000611008 GOLGA6L1Q8N7Z2 621 aa9.13□□□□□ -0.95
TARDBP-212ENST00000611008 PCDHB11Q9Y5F2 797 aa9.13□□□□□ -0.95
TARDBP-212ENST00000611008 KRTAP4-8Q9BYQ9 185 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms