RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 KIF1AQ12756 1690 aa18.2■□□□□ 0.5
HLA-F-230ENST00000606273 KIF1BO60333 1816 aa18.2■□□□□ 0.5
HLA-F-230ENST00000606273 PTGER2P43116 358 aa18.19■□□□□ 0.5
HLA-F-230ENST00000606273 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
HLA-F-230ENST00000606273 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
HLA-F-230ENST00000606273 NRXN1Q9ULB1 1477 aa18.18■□□□□ 0.5
HLA-F-230ENST00000606273 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
HLA-F-230ENST00000606273 FMN2Q9NZ56 1722 aa18.18■□□□□ 0.5
HLA-F-230ENST00000606273 LARP6Q9BRS8 491 aaKnown RBP18.17■□□□□ 0.5
HLA-F-230ENST00000606273 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
HLA-F-230ENST00000606273 SPATA31A1Q5TZJ5 1347 aa18.17■□□□□ 0.5
HLA-F-230ENST00000606273 ARHGAP33O14559 1287 aa18.15■□□□□ 0.5
HLA-F-230ENST00000606273 C1QTNF8P60827 252 aa18.14■□□□□ 0.49
HLA-F-230ENST00000606273 THSD7AQ9UPZ6 1657 aa18.14■□□□□ 0.49
HLA-F-230ENST00000606273 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
HLA-F-230ENST00000606273 RGL3Q3MIN7 710 aa18.13■□□□□ 0.49
HLA-F-230ENST00000606273 YTHDC2Q9H6S0 1430 aaKnown RBP18.13■□□□□ 0.49
HLA-F-230ENST00000606273 PDE3BQ13370 1112 aa18.12■□□□□ 0.49
HLA-F-230ENST00000606273 PPP4R3BQ5MIZ7 849 aa18.12■□□□□ 0.49
HLA-F-230ENST00000606273 DDX27Q96GQ7 796 aaKnown RBP18.12■□□□□ 0.49
HLA-F-230ENST00000606273 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
HLA-F-230ENST00000606273 ABCA3Q99758 1704 aa18.12■□□□□ 0.49
HLA-F-230ENST00000606273 PPLO60437 1756 aa18.12■□□□□ 0.49
HLA-F-230ENST00000606273 COL14A1Q05707 1796 aaKnown RBP18.11■□□□□ 0.49
HLA-F-230ENST00000606273 STRN4Q9NRL3 753 aa18.09■□□□□ 0.49
HLA-F-230ENST00000606273 ANKRD30BQ9BXX2 1392 aa18.08■□□□□ 0.49
HLA-F-230ENST00000606273 SAFB2Q14151 953 aaKnown RBP eCLIP18.08■□□□□ 0.48
HLA-F-230ENST00000606273 BARGINQ6ZT62 677 aa18.08■□□□□ 0.48
HLA-F-230ENST00000606273 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
HLA-F-230ENST00000606273 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
HLA-F-230ENST00000606273 PSEN2P49810 448 aa18.07■□□□□ 0.48
HLA-F-230ENST00000606273 MFSD10Q14728 455 aa18.07■□□□□ 0.48
HLA-F-230ENST00000606273 PRAM1Q96QH2 718 aa18.07■□□□□ 0.48
HLA-F-230ENST00000606273 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
HLA-F-230ENST00000606273 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
HLA-F-230ENST00000606273 RGPD8O14715 1765 aaPredicted RBP18.06■□□□□ 0.48
HLA-F-230ENST00000606273 RREB1Q92766 1687 aa18.06■□□□□ 0.48
HLA-F-230ENST00000606273 CAMTA1Q9Y6Y1 1673 aa18.06■□□□□ 0.48
HLA-F-230ENST00000606273 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
HLA-F-230ENST00000606273 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
HLA-F-230ENST00000606273 PIK3C2GO75747 1445 aa18.05■□□□□ 0.48
HLA-F-230ENST00000606273 ANKARQ7Z5J8 1434 aa18.05■□□□□ 0.48
HLA-F-230ENST00000606273 KIAA0232Q92628 1395 aa18.04■□□□□ 0.48
HLA-F-230ENST00000606273 NUP188Q5SRE5 1749 aa18.04■□□□□ 0.48
HLA-F-230ENST00000606273 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
HLA-F-230ENST00000606273 DMRTA1Q5VZB9 504 aa18.04■□□□□ 0.48
HLA-F-230ENST00000606273 UTRNP46939 3433 aa18.04■□□□□ 0.48
HLA-F-230ENST00000606273 EVA1CP58658 441 aa18.03■□□□□ 0.48
HLA-F-230ENST00000606273 AMER1Q5JTC6 1135 aaPredicted RBP18.03■□□□□ 0.48
HLA-F-230ENST00000606273 ADGRD1Q6QNK2 874 aa18.03■□□□□ 0.48
HLA-F-230ENST00000606273 BBXQ8WY36 941 aaPredicted RBP18.03■□□□□ 0.48
HLA-F-230ENST00000606273 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
HLA-F-230ENST00000606273 PLSCR1O15162 318 aa18.02■□□□□ 0.48
HLA-F-230ENST00000606273 SYT17Q9BSW7 474 aa18.02■□□□□ 0.48
HLA-F-230ENST00000606273 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.47
HLA-F-230ENST00000606273 ZBTB7AO95365 584 aa18.01■□□□□ 0.47
HLA-F-230ENST00000606273 ZC3H6P61129 1189 aaKnown RBP18.01■□□□□ 0.47
HLA-F-230ENST00000606273 CFAP70Q5T0N1 1121 aa18.01■□□□□ 0.47
HLA-F-230ENST00000606273 ZNF454Q8N9F8 522 aa18.01■□□□□ 0.47
HLA-F-230ENST00000606273 POGKQ9P215 609 aa18.01■□□□□ 0.47
HLA-F-230ENST00000606273 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
HLA-F-230ENST00000606273 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
HLA-F-230ENST00000606273 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
HLA-F-230ENST00000606273 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
HLA-F-230ENST00000606273 TRPM3Q9HCF6 1732 aaPredicted RBP18■□□□□ 0.47
HLA-F-230ENST00000606273 PRR36Q9H6K5 1346 aa17.99■□□□□ 0.47
HLA-F-230ENST00000606273 IFT172Q9UG01 1749 aa17.99■□□□□ 0.47
HLA-F-230ENST00000606273 FHDC1Q9C0D6 1143 aaPredicted RBP17.99■□□□□ 0.47
HLA-F-230ENST00000606273 ALS2Q96Q42 1657 aa17.99■□□□□ 0.47
HLA-F-230ENST00000606273 C11orf95C9JLR9 678 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-230ENST00000606273 EVI5O60447 810 aa17.98■□□□□ 0.47
HLA-F-230ENST00000606273 HIRIP3Q9BW71 556 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-230ENST00000606273 TK2O00142 265 aa17.97■□□□□ 0.47
HLA-F-230ENST00000606273 KCNK17Q96T54 332 aa17.97■□□□□ 0.47
HLA-F-230ENST00000606273 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
HLA-F-230ENST00000606273 EMILIN3Q9NT22 766 aa17.96■□□□□ 0.47
HLA-F-230ENST00000606273 THRAP3Q9Y2W1 955 aaKnown RBP17.96■□□□□ 0.47
HLA-F-230ENST00000606273 SSH2Q76I76 1423 aa17.96■□□□□ 0.47
HLA-F-230ENST00000606273 FOSBP53539 338 aa17.95■□□□□ 0.46
HLA-F-230ENST00000606273 MAP3K9P80192 1104 aa17.95■□□□□ 0.46
HLA-F-230ENST00000606273 NRKQ7Z2Y5 1582 aa17.95■□□□□ 0.46
HLA-F-230ENST00000606273 WASLO00401 505 aaPredicted RBP17.93■□□□□ 0.46
HLA-F-230ENST00000606273 NUTM2GQ5VZR2 741 aa17.93■□□□□ 0.46
HLA-F-230ENST00000606273 PTF1AQ7RTS3 328 aa17.93■□□□□ 0.46
HLA-F-230ENST00000606273 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
HLA-F-230ENST00000606273 CRYBG1Q9Y4K1 1723 aa17.92■□□□□ 0.46
HLA-F-230ENST00000606273 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
HLA-F-230ENST00000606273 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
HLA-F-230ENST00000606273 HRO43593 1189 aa17.9■□□□□ 0.46
HLA-F-230ENST00000606273 BCL2L12Q9HB09 334 aa17.9■□□□□ 0.46
HLA-F-230ENST00000606273 TRAK1Q9UPV9 953 aa17.9■□□□□ 0.46
HLA-F-230ENST00000606273 CASZ1Q86V15 1759 aa17.89■□□□□ 0.45
HLA-F-230ENST00000606273 SLC15A2Q16348 729 aa17.89■□□□□ 0.45
HLA-F-230ENST00000606273 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
HLA-F-230ENST00000606273 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
HLA-F-230ENST00000606273 STK32BQ9NY57 414 aa17.88■□□□□ 0.45
HLA-F-230ENST00000606273 OVOS2A0A0G2JMS6 1433 aa17.88■□□□□ 0.45
HLA-F-230ENST00000606273 OVOS2A0A0J9YW53 1432 aa17.88■□□□□ 0.45
HLA-F-230ENST00000606273 OVOS2Q6IE36 1432 aa17.88■□□□□ 0.45
HLA-F-230ENST00000606273 MYOM1P52179 1685 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms