RNA–Protein interactions for RNA: ENST00000606102.1

HMGN2P28-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 28, humanhuman

BASIC

Gene HMGN2P28, Length 262 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P28-201ENST00000606102 NPAS3Q8IXF0 933 aa6.02□□□□□ -1.45
HMGN2P28-201ENST00000606102 PNMA1Q8ND90 353 aa6.02□□□□□ -1.45
HMGN2P28-201ENST00000606102 TSEN34Q9BSV6 310 aaKnown RBP6.02□□□□□ -1.45
HMGN2P28-201ENST00000606102 ZNF777Q9ULD5 760 aaPredicted RBP6.02□□□□□ -1.45
HMGN2P28-201ENST00000606102 FIGNL2A6NMB9 653 aa6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 GIGYF1O75420 1035 aaPredicted RBP6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 UPP2O95045 317 aa6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 DHX9Q08211 1270 aaKnown RBP6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 KCNA1Q09470 495 aa6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 NBPF20Q3BBV1 942 aa6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 RETREG2Q8NC44 543 aa6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 BANK1Q8NDB2 785 aa6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 AMOTL2Q9Y2J4 779 aa6.01□□□□□ -1.45
HMGN2P28-201ENST00000606102 TTLL8A6PVC2 850 aa6□□□□□ -1.45
HMGN2P28-201ENST00000606102 CTSOP43234 321 aaPredicted RBP6□□□□□ -1.45
HMGN2P28-201ENST00000606102 RELBQ01201 579 aa6□□□□□ -1.45
HMGN2P28-201ENST00000606102 SLC16A10Q8TF71 515 aa6□□□□□ -1.45
HMGN2P28-201ENST00000606102 PRM3Q9NNZ6 103 aa6□□□□□ -1.45
HMGN2P28-201ENST00000606102 PCDHB9Q9Y5E1 797 aa6□□□□□ -1.45
HMGN2P28-201ENST00000606102 PPFIA3O75145 1194 aa5.99□□□□□ -1.45
HMGN2P28-201ENST00000606102 ADH1AP07327 375 aa5.99□□□□□ -1.45
HMGN2P28-201ENST00000606102 IRF7Q92985 503 aa5.99□□□□□ -1.45
HMGN2P28-201ENST00000606102 INSM2Q96T92 566 aaPredicted RBP5.99□□□□□ -1.45
HMGN2P28-201ENST00000606102 ZNF395Q9H8N7 513 aaPredicted RBP5.99□□□□□ -1.45
HMGN2P28-201ENST00000606102 CYLDQ9NQC7 956 aa5.99□□□□□ -1.45
HMGN2P28-201ENST00000606102 SOCS7O14512 581 aa5.98□□□□□ -1.45
HMGN2P28-201ENST00000606102 VSIG8P0DPA2 414 aa5.98□□□□□ -1.45
HMGN2P28-201ENST00000606102 NR1H3Q13133 447 aa5.98□□□□□ -1.45
HMGN2P28-201ENST00000606102 FOXD4L5Q5VV16 416 aaPredicted RBP5.98□□□□□ -1.45
HMGN2P28-201ENST00000606102 PUS7Q96PZ0 661 aaKnown RBP5.98□□□□□ -1.45
HMGN2P28-201ENST00000606102 LOC105371045A0A1W2PR82 267 aa5.97□□□□□ -1.45
HMGN2P28-201ENST00000606102 PTSQ03393 145 aa5.97□□□□□ -1.45
HMGN2P28-201ENST00000606102 TBC1D2BQ9UPU7 963 aa5.97□□□□□ -1.45
HMGN2P28-201ENST00000606102 USTQ9Y2C2 406 aa5.97□□□□□ -1.45
HMGN2P28-201ENST00000606102 NDUFB9Q9Y6M9 179 aa5.97□□□□□ -1.45
HMGN2P28-201ENST00000606102 IGSF3O75054 1194 aa5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 BRD1O95696 1058 aa5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 PTGIRP43119 386 aa5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 INSM1Q01101 510 aaPredicted RBP5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 IRF5Q13568 498 aa5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 SEPT12Q8IYM1 358 aa5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 GPR161Q8N6U8 529 aaKnown RBP5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 RNF217Q8TC41 542 aa5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 ZNF330Q9Y3S2 320 aaPredicted RBP5.96□□□□□ -1.46
HMGN2P28-201ENST00000606102 SENP3-EIF4A1A0A087X0R7 540 aa5.95□□□□□ -1.46
HMGN2P28-201ENST00000606102 SLC35F4A4IF30 521 aa5.95□□□□□ -1.46
HMGN2P28-201ENST00000606102 SCTRP47872 440 aa5.95□□□□□ -1.46
HMGN2P28-201ENST00000606102 FNBP4Q8N3X1 1017 aaPredicted RBP5.95□□□□□ -1.46
HMGN2P28-201ENST00000606102 FOXD4L4Q8WXT5 416 aaPredicted RBP5.95□□□□□ -1.46
HMGN2P28-201ENST00000606102 POLMQ9NP87 494 aaPredicted RBP5.95□□□□□ -1.46
HMGN2P28-201ENST00000606102 KRT76Q01546 638 aa5.94□□□□□ -1.46
HMGN2P28-201ENST00000606102 CCDC27Q2M243 656 aa5.94□□□□□ -1.46
HMGN2P28-201ENST00000606102 CCDC155Q8N6L0 562 aa5.94□□□□□ -1.46
HMGN2P28-201ENST00000606102 STK17AQ9UEE5 414 aa5.94□□□□□ -1.46
HMGN2P28-201ENST00000606102 CSB-PGBD3P0DP91 1061 aa5.93□□□□□ -1.46
HMGN2P28-201ENST00000606102 ERVK-9P63128 1117 aa5.93□□□□□ -1.46
HMGN2P28-201ENST00000606102 USP35Q9P2H5 1018 aa5.93□□□□□ -1.46
HMGN2P28-201ENST00000606102 CCDC85AQ96PX6 553 aaPredicted RBP5.92□□□□□ -1.46
HMGN2P28-201ENST00000606102 OSBPL3Q9H4L5 887 aa5.92□□□□□ -1.46
HMGN2P28-201ENST00000606102 ATP5J2-PTCD1G3V325 749 aa5.91□□□□□ -1.46
HMGN2P28-201ENST00000606102 CC2D2BQ6DHV5 1058 aa5.91□□□□□ -1.46
HMGN2P28-201ENST00000606102 ZSCAN1Q8NBB4 408 aa5.91□□□□□ -1.46
HMGN2P28-201ENST00000606102 CDCA7Q9BWT1 371 aaPredicted RBP5.91□□□□□ -1.46
HMGN2P28-201ENST00000606102 PCDHB11Q9Y5F2 797 aa5.91□□□□□ -1.46
HMGN2P28-201ENST00000606102 A0A1W2PRU2 124 aa5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 RHOQP17081 205 aa5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 ITGA6P23229 1130 aa5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 CANXP27824 592 aaKnown RBP5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 RNF144AP50876 292 aaPredicted RBP5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 TSGA10IPQ3SY00 556 aa5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 B4GALNT3Q6L9W6 998 aa5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 CALR3Q96L12 384 aaKnown RBP5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 GDPD2Q9HCC8 539 aa5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 CUEDC1Q9NWM3 386 aaPredicted RBP5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 CEP126Q9P2H0 1117 aa5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 COG6Q9Y2V7 657 aa5.9□□□□□ -1.46
HMGN2P28-201ENST00000606102 MCCD1P59942 119 aaPredicted RBP5.89□□□□□ -1.47
HMGN2P28-201ENST00000606102 VAC14Q08AM6 782 aa5.89□□□□□ -1.47
HMGN2P28-201ENST00000606102 RNFT1Q5M7Z0 435 aa5.89□□□□□ -1.47
HMGN2P28-201ENST00000606102 RNF20Q5VTR2 975 aa5.89□□□□□ -1.47
HMGN2P28-201ENST00000606102 PRICKLE2Q7Z3G6 844 aa5.89□□□□□ -1.47
HMGN2P28-201ENST00000606102 PHTF2Q8N3S3 785 aa5.89□□□□□ -1.47
HMGN2P28-201ENST00000606102 NANOS1Q8WY41 292 aaKnown RBP5.89□□□□□ -1.47
HMGN2P28-201ENST00000606102 PBXIP1Q96AQ6 731 aa5.89□□□□□ -1.47
HMGN2P28-201ENST00000606102 MEN1O00255 615 aa5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 EIF5BO60841 1220 aaKnown RBP5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 LYSMD3Q7Z3D4 306 aa5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 VWA5B2Q8N398 1253 aa5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 POM121Q96HA1 1249 aa5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 CNTNAP3BQ96NU0 1288 aa5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 CNTNAP3Q9BZ76 1288 aa5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 ARHGEF10LQ9HCE6 1279 aa5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 RAB6BQ9NRW1 208 aa5.88□□□□□ -1.47
HMGN2P28-201ENST00000606102 STAU1O95793 577 aaKnown RBP5.87□□□□□ -1.47
HMGN2P28-201ENST00000606102 ABL2P42684 1182 aa5.87□□□□□ -1.47
HMGN2P28-201ENST00000606102 COL25A1Q9BXS0 654 aaPredicted RBP5.87□□□□□ -1.47
HMGN2P28-201ENST00000606102 CDC14CA4D256 554 aa5.86□□□□□ -1.47
HMGN2P28-201ENST00000606102 IL2RAP01589 272 aa5.86□□□□□ -1.47
HMGN2P28-201ENST00000606102 CLN3Q13286 438 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms