RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 TRIM35Q9UPQ4 493 aa28.98■■■□□ 2.23
SNRNP70-209ENST00000601065 TATP17735 454 aaPredicted RBP28.98■■■□□ 2.23
SNRNP70-209ENST00000601065 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.97■■■□□ 2.23
SNRNP70-209ENST00000601065 AMOTQ4VCS5 1084 aa28.97■■■□□ 2.23
SNRNP70-209ENST00000601065 PLEKHO1Q53GL0 409 aaPredicted RBP28.96■■■□□ 2.23
SNRNP70-209ENST00000601065 PARP4Q9UKK3 1724 aaKnown RBP28.96■■■□□ 2.23
SNRNP70-209ENST00000601065 USP21Q9UK80 565 aa28.96■■■□□ 2.23
SNRNP70-209ENST00000601065 SPATA31A1Q5TZJ5 1347 aa28.95■■■□□ 2.22
SNRNP70-209ENST00000601065 OVOS2A0A0G2JMS6 1433 aa28.95■■■□□ 2.22
SNRNP70-209ENST00000601065 IL2RBP14784 551 aa28.94■■■□□ 2.22
SNRNP70-209ENST00000601065 SPATA31A5Q5VU36 1347 aa28.94■■■□□ 2.22
SNRNP70-209ENST00000601065 SPATA31A7Q8IWB4 1347 aa28.94■■■□□ 2.22
SNRNP70-209ENST00000601065 PKD1L3Q7Z443 1732 aa28.93■■■□□ 2.22
SNRNP70-209ENST00000601065 AFF2P51816 1311 aa28.93■■■□□ 2.22
SNRNP70-209ENST00000601065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.93■■■□□ 2.223e-14■□□□□ 10.9
SNRNP70-209ENST00000601065 LMOD3Q0VAK6 560 aa28.92■■■□□ 2.22
SNRNP70-209ENST00000601065 VPS72Q15906 364 aa28.92■■■□□ 2.22
SNRNP70-209ENST00000601065 PDE3BQ13370 1112 aa28.91■■■□□ 2.22
SNRNP70-209ENST00000601065 THRAP3Q9Y2W1 955 aaKnown RBP28.91■■■□□ 2.22
SNRNP70-209ENST00000601065 DISP2A7MBM2 1401 aa28.91■■■□□ 2.22
SNRNP70-209ENST00000601065 WNK3Q9BYP7 1800 aa28.91■■■□□ 2.22
SNRNP70-209ENST00000601065 SPG7Q9UQ90 795 aa28.9■■■□□ 2.22
SNRNP70-209ENST00000601065 CCDC9Q9Y3X0 531 aaKnown RBP28.9■■■□□ 2.22
SNRNP70-209ENST00000601065 GOLGA2Q08379 1002 aa28.89■■■□□ 2.22
SNRNP70-209ENST00000601065 ZNF530Q6P9A1 599 aaPredicted RBP28.89■■■□□ 2.22
SNRNP70-209ENST00000601065 WDR63Q8IWG1 891 aa28.89■■■□□ 2.22
SNRNP70-209ENST00000601065 MAP3K5Q99683 1374 aa28.89■■■□□ 2.21
SNRNP70-209ENST00000601065 GNAT3A8MTJ3 354 aa28.88■■■□□ 2.21
SNRNP70-209ENST00000601065 CDCA7LQ96GN5 454 aa28.88■■■□□ 2.21
SNRNP70-209ENST00000601065 AKAP4Q5JQC9 854 aa28.87■■■□□ 2.21
SNRNP70-209ENST00000601065 HTATSF1O43719 755 aaKnown RBP28.86■■■□□ 2.21
SNRNP70-209ENST00000601065 DCTN1Q14203 1278 aa28.85■■■□□ 2.21
SNRNP70-209ENST00000601065 RTF1Q92541 710 aaKnown RBP28.85■■■□□ 2.21
SNRNP70-209ENST00000601065 C1orf141Q5JVX7 400 aa28.85■■■□□ 2.21
SNRNP70-209ENST00000601065 BARGINQ6ZT62 677 aa28.85■■■□□ 2.21
SNRNP70-209ENST00000601065 ZCRB1Q8TBF4 217 aaKnown RBP28.85■■■□□ 2.21
SNRNP70-209ENST00000601065 THUMPD2Q9BTF0 503 aaKnown RBP28.85■■■□□ 2.21
SNRNP70-209ENST00000601065 MCM10Q7L590 875 aa28.84■■■□□ 2.21
SNRNP70-209ENST00000601065 SPINK5Q9NQ38 1064 aaPredicted RBP28.84■■■□□ 2.21
SNRNP70-209ENST00000601065 SHANK3Q9BYB0 1731 aa28.84■■■□□ 2.21
SNRNP70-209ENST00000601065 CDCA7Q9BWT1 371 aaPredicted RBP28.83■■■□□ 2.21
SNRNP70-209ENST00000601065 ATRNO75882 1429 aa28.83■■■□□ 2.2
SNRNP70-209ENST00000601065 SLFN5Q08AF3 891 aa28.82■■■□□ 2.2
SNRNP70-209ENST00000601065 PCDH11XQ9BZA7 1347 aa28.82■■■□□ 2.2
SNRNP70-209ENST00000601065 PCDH11YQ9BZA8 1340 aa28.82■■■□□ 2.2
SNRNP70-209ENST00000601065 CYP27B1O15528 508 aa28.81■■■□□ 2.2
SNRNP70-209ENST00000601065 PHKG2P15735 406 aa28.81■■■□□ 2.2
SNRNP70-209ENST00000601065 IFNL2Q8IZJ0 200 aa28.81■■■□□ 2.2
SNRNP70-209ENST00000601065 IL16Q14005 1332 aa28.81■■■□□ 2.2
SNRNP70-209ENST00000601065 E9PSI1 815 aa28.8■■■□□ 2.2
SNRNP70-209ENST00000601065 TRPC5Q9UL62 973 aaPredicted RBP28.8■■■□□ 2.2
SNRNP70-209ENST00000601065 CALD1Q05682 793 aaKnown RBP28.8■■■□□ 2.2
SNRNP70-209ENST00000601065 IL17REQ8NFR9 667 aa28.8■■■□□ 2.2
SNRNP70-209ENST00000601065 LRRC37A3O60309 1634 aa28.79■■■□□ 2.2
SNRNP70-209ENST00000601065 GLI3P10071 1580 aa28.78■■■□□ 2.2
SNRNP70-209ENST00000601065 TRMT2AQ8IZ69 625 aaKnown RBP28.78■■■□□ 2.2
SNRNP70-209ENST00000601065 GJD4Q96KN9 370 aaPredicted RBP28.78■■■□□ 2.2
SNRNP70-209ENST00000601065 CEMIPQ8WUJ3 1361 aa28.78■■■□□ 2.2
SNRNP70-209ENST00000601065 VIRMAQ69YN4 1812 aaKnown RBP28.78■■■□□ 2.2
SNRNP70-209ENST00000601065 MPRIPQ6WCQ1 1025 aa28.78■■■□□ 2.2
SNRNP70-209ENST00000601065 ADAMTS7Q9UKP4 1686 aa28.77■■■□□ 2.2
SNRNP70-209ENST00000601065 FAM98CQ17RN3 349 aaKnown RBP28.77■■■□□ 2.2
SNRNP70-209ENST00000601065 DUSP27Q5VZP5 1158 aa28.77■■■□□ 2.2
SNRNP70-209ENST00000601065 TNS2Q63HR2 1409 aa28.77■■■□□ 2.2
SNRNP70-209ENST00000601065 LGR6Q9HBX8 967 aa28.76■■■□□ 2.19
SNRNP70-209ENST00000601065 EXOC5O00471 708 aa28.75■■■□□ 2.19
SNRNP70-209ENST00000601065 QTRT2Q9H974 415 aaKnown RBP28.75■■■□□ 2.19
SNRNP70-209ENST00000601065 RNMTO43148 476 aaKnown RBP28.74■■■□□ 2.19
SNRNP70-209ENST00000601065 DDX54Q8TDD1 881 aaKnown RBP28.74■■■□□ 2.19
SNRNP70-209ENST00000601065 IFT57Q9NWB7 429 aa28.74■■■□□ 2.19
SNRNP70-209ENST00000601065 KDM6AO15550 1401 aaPredicted RBP28.74■■■□□ 2.19
SNRNP70-209ENST00000601065 SCN11AQ9UI33 1791 aa28.73■■■□□ 2.19
SNRNP70-209ENST00000601065 HSP90AB1P08238 724 aaKnown RBP28.73■■■□□ 2.19
SNRNP70-209ENST00000601065 DDB1Q16531 1140 aa28.73■■■□□ 2.19
SNRNP70-209ENST00000601065 MYH16Q9H6N6 1097 aa28.73■■■□□ 2.19
SNRNP70-209ENST00000601065 ZNF853P0CG23 659 aa28.73■■■□□ 2.19
SNRNP70-209ENST00000601065 CFAP44Q96MT7 982 aa28.73■■■□□ 2.19
SNRNP70-209ENST00000601065 GNAI1P63096 354 aa28.72■■■□□ 2.19
SNRNP70-209ENST00000601065 ZNF772Q68DY9 489 aaPredicted RBP28.72■■■□□ 2.19
SNRNP70-209ENST00000601065 DCAF5Q96JK2 942 aa28.72■■■□□ 2.19
SNRNP70-209ENST00000601065 THSD7AQ9UPZ6 1657 aa28.72■■■□□ 2.19
SNRNP70-209ENST00000601065 NKX1-1Q15270 411 aaPredicted RBP28.71■■■□□ 2.19
SNRNP70-209ENST00000601065 LAS1LQ9Y4W2 734 aaKnown RBP28.71■■■□□ 2.19
SNRNP70-209ENST00000601065 FANCIQ9NVI1 1328 aa28.7■■■□□ 2.18
SNRNP70-209ENST00000601065 TSR2Q969E8 191 aaKnown RBP28.7■■■□□ 2.18
SNRNP70-209ENST00000601065 CHL1O00533 1208 aa28.67■■■□□ 2.18
SNRNP70-209ENST00000601065 ONECUT3O60422 494 aaPredicted RBP28.67■■■□□ 2.18
SNRNP70-209ENST00000601065 TEFQ10587 303 aa28.67■■■□□ 2.18
SNRNP70-209ENST00000601065 MBIPQ9NS73 344 aa28.67■■■□□ 2.18
SNRNP70-209ENST00000601065 TAF7Q15545 349 aaPredicted RBP28.66■■■□□ 2.18
SNRNP70-209ENST00000601065 SIPA1L3O60292 1781 aaPredicted RBP28.66■■■□□ 2.18
SNRNP70-209ENST00000601065 MRC1P22897 1456 aa28.65■■■□□ 2.18
SNRNP70-209ENST00000601065 A0A0G2JS52 829 aa28.64■■■□□ 2.18
SNRNP70-209ENST00000601065 MYT1Q01538 1121 aa28.64■■■□□ 2.18
SNRNP70-209ENST00000601065 SLC52A2Q9HAB3 445 aa28.63■■■□□ 2.17
SNRNP70-209ENST00000601065 MIS18AQ9NYP9 233 aa28.63■■■□□ 2.17
SNRNP70-209ENST00000601065 ILDR1Q86SU0 546 aaPredicted RBP28.62■■■□□ 2.17
SNRNP70-209ENST00000601065 BABAM1Q9NWV8 329 aa28.62■■■□□ 2.17
SNRNP70-209ENST00000601065 TSPYL4Q9UJ04 414 aa28.62■■■□□ 2.17
SNRNP70-209ENST00000601065 TOGARAM1Q9Y4F4 1720 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms