RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SIRT1Q96EB6 747 aa7.14□□□□□ -1.27
CKS1BP3-201ENST00000600888 OSBPL3Q9H4L5 887 aa7.14□□□□□ -1.27
CKS1BP3-201ENST00000600888 C1orf115Q9H7X2 142 aa7.14□□□□□ -1.27
CKS1BP3-201ENST00000600888 ADH1AP07327 375 aa7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 BMP1P13497 986 aa7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 NCOA4Q13772 614 aa7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 EML3Q32P44 896 aa7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 PLEKHM2Q8IWE5 1019 aa7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 KDF1Q8NAX2 398 aaPredicted RBP7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 AGBL1Q96MI9 1066 aa7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 TSEN34Q9BSV6 310 aaKnown RBP7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 ATP13A2Q9NQ11 1180 aa7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 MAFBQ9Y5Q3 323 aaPredicted RBP7.13□□□□□ -1.27
CKS1BP3-201ENST00000600888 USP17L3A6NCW0 530 aa7.12□□□□□ -1.27
CKS1BP3-201ENST00000600888 USP17L4A6NCW7 530 aa7.12□□□□□ -1.27
CKS1BP3-201ENST00000600888 UPP2O95045 317 aa7.12□□□□□ -1.27
CKS1BP3-201ENST00000600888 USP17L2Q6R6M4 530 aa7.12□□□□□ -1.27
CKS1BP3-201ENST00000600888 USP17L1Q7RTZ2 530 aa7.12□□□□□ -1.27
CKS1BP3-201ENST00000600888 LINC00528Q8N1L1 170 aa7.12□□□□□ -1.27
CKS1BP3-201ENST00000600888 SERPINA10Q9UK55 444 aa7.12□□□□□ -1.27
CKS1BP3-201ENST00000600888 NOD1Q9Y239 953 aa7.12□□□□□ -1.27
CKS1BP3-201ENST00000600888 ATP5J2-PTCD1G3V325 749 aa7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 LMOD1P29536 600 aaPredicted RBP7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 PTGIRP43119 386 aa7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 RELBQ01201 579 aa7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 SCARF1Q14162 830 aa7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 CFAP70Q5T0N1 1121 aa7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 C6orf118Q5T5N4 469 aa7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 CYP2U1Q7Z449 544 aa7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 CCDC97Q96F63 343 aaPredicted RBP7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 PURBQ96QR8 312 aaKnown RBP7.11□□□□□ -1.27
CKS1BP3-201ENST00000600888 BMP2P12643 396 aa7.1□□□□□ -1.27
CKS1BP3-201ENST00000600888 ZFP42Q96MM3 310 aa7.1□□□□□ -1.27
CKS1BP3-201ENST00000600888 ZNF395Q9H8N7 513 aaPredicted RBP7.1□□□□□ -1.27
CKS1BP3-201ENST00000600888 MKRN1Q9UHC7 482 aaKnown RBP7.1□□□□□ -1.27
CKS1BP3-201ENST00000600888 PCDHGA11Q9Y5H2 935 aa7.1□□□□□ -1.27
CKS1BP3-201ENST00000600888 A0A1W2PRU2 124 aa7.09□□□□□ -1.27
CKS1BP3-201ENST00000600888 SPINT1O43278 529 aa7.09□□□□□ -1.27
CKS1BP3-201ENST00000600888 GNRH1P01148 92 aa7.09□□□□□ -1.27
CKS1BP3-201ENST00000600888 RFX1P22670 979 aa7.09□□□□□ -1.27
CKS1BP3-201ENST00000600888 CCDC82Q8N4S0 544 aa7.09□□□□□ -1.27
CKS1BP3-201ENST00000600888 GMPR2Q9P2T1 348 aaKnown RBP7.09□□□□□ -1.27
CKS1BP3-201ENST00000600888 GTF2IP78347 998 aa7.08□□□□□ -1.28
CKS1BP3-201ENST00000600888 KANK4Q5T7N3 995 aaPredicted RBP7.08□□□□□ -1.28
CKS1BP3-201ENST00000600888 TRIM50Q86XT4 487 aa7.08□□□□□ -1.28
CKS1BP3-201ENST00000600888 SENP2Q9HC62 589 aa7.08□□□□□ -1.28
CKS1BP3-201ENST00000600888 POTECB2RU33 542 aa7.07□□□□□ -1.28
CKS1BP3-201ENST00000600888 ZBTB7BO15156 539 aaPredicted RBP7.07□□□□□ -1.28
CKS1BP3-201ENST00000600888 INSM2Q96T92 566 aaPredicted RBP7.07□□□□□ -1.28
CKS1BP3-201ENST00000600888 VRTNQ9H8Y1 702 aa7.07□□□□□ -1.28
CKS1BP3-201ENST00000600888 ARHGEF10LQ9HCE6 1279 aa7.07□□□□□ -1.28
CKS1BP3-201ENST00000600888 STAU1O95793 577 aaKnown RBP7.06□□□□□ -1.28
CKS1BP3-201ENST00000600888 ATP1A2P50993 1020 aa7.06□□□□□ -1.28
CKS1BP3-201ENST00000600888 CLDN10P78369 228 aa7.06□□□□□ -1.28
CKS1BP3-201ENST00000600888 CLN3Q13286 438 aa7.06□□□□□ -1.28
CKS1BP3-201ENST00000600888 OGFOD1Q8N543 542 aa7.06□□□□□ -1.28
CKS1BP3-201ENST00000600888 KIFC2Q96AC6 838 aa7.06□□□□□ -1.28
CKS1BP3-201ENST00000600888 TRIM47Q96LD4 638 aa7.06□□□□□ -1.28
CKS1BP3-201ENST00000600888 RAB6BQ9NRW1 208 aa7.06□□□□□ -1.28
CKS1BP3-201ENST00000600888 SOS2Q07890 1332 aaPredicted RBP7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 C11orf95C9JLR9 678 aaPredicted RBP7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 MEN1O00255 615 aa7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 CTSOP43234 321 aaPredicted RBP7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 SCNN1DP51172 638 aa7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 SRPK2P78362 688 aaKnown RBP7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 ESCO1Q5FWF5 840 aa7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 XAGE2Q96GT9 111 aa7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 ETNK1Q9HBU6 452 aa7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 DNAAF2Q9NVR5 837 aaKnown RBP7.05□□□□□ -1.28
CKS1BP3-201ENST00000600888 TTLL8A6PVC2 850 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 IL2RAP01589 272 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 SNRPBP14678 240 aaKnown RBP7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 RASA1P20936 1047 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 GDF10P55107 478 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 PSME1Q06323 249 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 CDCA8Q53HL2 280 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 LARGE2Q8N3Y3 721 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 CNKSR1Q969H4 720 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 NLRP3Q96P20 1036 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 ESYT1Q9BSJ8 1104 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 KIAA1024Q9UPX6 916 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 HRH3Q9Y5N1 445 aa7.04□□□□□ -1.28
CKS1BP3-201ENST00000600888 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 FIGNL2A6NMB9 653 aa7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 TMEM229AB2RXF0 380 aa7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 WASLO00401 505 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 INHAP05111 366 aa7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 RNF144AP50876 292 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 CCDC102BQ68D86 513 aa7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 ZNF787Q6DD87 383 aa7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 LARP1Q6PKG0 1096 aaKnown RBP7.03□□□□□ -1.28
CKS1BP3-201ENST00000600888 GPC1P35052 558 aa7.02□□□□□ -1.29
CKS1BP3-201ENST00000600888 CENPCQ03188 943 aa7.02□□□□□ -1.29
CKS1BP3-201ENST00000600888 PTK7Q13308 1070 aa7.02□□□□□ -1.29
CKS1BP3-201ENST00000600888 CRTC2Q53ET0 693 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP3-201ENST00000600888 FOXD4L5Q5VV16 416 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP3-201ENST00000600888 TPCN2Q8NHX9 752 aa7.02□□□□□ -1.29
CKS1BP3-201ENST00000600888 ZNF594Q96JF6 807 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP3-201ENST00000600888 ARID3AQ99856 593 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms