RNA–Protein interactions for RNA: ENST00000600358.7

STRN4-218, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 1,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-218ENST00000600358 TCP11L2Q8N4U5 519 aa21.55■■□□□ 1.04
STRN4-218ENST00000600358 RAPGEF4Q8WZA2 1011 aa21.55■■□□□ 1.04
STRN4-218ENST00000600358 ZBED9Q6R2W3 1325 aa21.55■■□□□ 1.04
STRN4-218ENST00000600358 HNRNPUQ00839 825 aaKnown RBP eCLIP21.54■■□□□ 1.04
STRN4-218ENST00000600358 NFE2L2Q16236 605 aa21.54■■□□□ 1.04
STRN4-218ENST00000600358 CCDC27Q2M243 656 aa21.54■■□□□ 1.04
STRN4-218ENST00000600358 AMOTQ4VCS5 1084 aa21.54■■□□□ 1.04
STRN4-218ENST00000600358 GAS2L2Q8NHY3 880 aa21.54■■□□□ 1.04
STRN4-218ENST00000600358 PHACTR3Q96KR7 559 aa21.54■■□□□ 1.04
STRN4-218ENST00000600358 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
STRN4-218ENST00000600358 APAF1O14727 1248 aa21.53■■□□□ 1.04
STRN4-218ENST00000600358 TATP17735 454 aaPredicted RBP21.53■■□□□ 1.04
STRN4-218ENST00000600358 TMPOP42166 694 aaKnown RBP21.53■■□□□ 1.04
STRN4-218ENST00000600358 BARGINQ6ZT62 677 aa21.53■■□□□ 1.04
STRN4-218ENST00000600358 CDCA7Q9BWT1 371 aaPredicted RBP21.53■■□□□ 1.04
STRN4-218ENST00000600358 SCN11AQ9UI33 1791 aa21.53■■□□□ 1.04
STRN4-218ENST00000600358 TNS2Q63HR2 1409 aa21.53■■□□□ 1.04
STRN4-218ENST00000600358 IL2RBP14784 551 aa21.52■■□□□ 1.04
STRN4-218ENST00000600358 PLEKHO1Q53GL0 409 aaPredicted RBP21.5■■□□□ 1.03
STRN4-218ENST00000600358 TRPC5Q9UL62 973 aaPredicted RBP21.5■■□□□ 1.03
STRN4-218ENST00000600358 ZNF521Q96K83 1311 aa21.5■■□□□ 1.03
STRN4-218ENST00000600358 SIPA1L3O60292 1781 aaPredicted RBP21.49■■□□□ 1.03
STRN4-218ENST00000600358 LMOD3Q0VAK6 560 aa21.49■■□□□ 1.03
STRN4-218ENST00000600358 MTHFSDQ2M296 383 aaKnown RBP21.49■■□□□ 1.03
STRN4-218ENST00000600358 MAP3K5Q99683 1374 aa21.48■■□□□ 1.03
STRN4-218ENST00000600358 HTATSF1O43719 755 aaKnown RBP21.47■■□□□ 1.03
STRN4-218ENST00000600358 ZNF772Q68DY9 489 aaPredicted RBP21.47■■□□□ 1.03
STRN4-218ENST00000600358 SPG7Q9UQ90 795 aa21.47■■□□□ 1.03
STRN4-218ENST00000600358 PCDH11XQ9BZA7 1347 aa21.46■■□□□ 1.03
STRN4-218ENST00000600358 PCDH11YQ9BZA8 1340 aa21.46■■□□□ 1.03
STRN4-218ENST00000600358 MRC1P22897 1456 aa21.45■■□□□ 1.03
STRN4-218ENST00000600358 RIPK4P57078 832 aa21.45■■□□□ 1.02
STRN4-218ENST00000600358 AKAP4Q5JQC9 854 aa21.45■■□□□ 1.02
STRN4-218ENST00000600358 GJD4Q96KN9 370 aaPredicted RBP21.45■■□□□ 1.02
STRN4-218ENST00000600358 TRIM35Q9UPQ4 493 aa21.45■■□□□ 1.02
STRN4-218ENST00000600358 TOGARAM1Q9Y4F4 1720 aa21.44■■□□□ 1.02
STRN4-218ENST00000600358 ZNF530Q6P9A1 599 aaPredicted RBP21.43■■□□□ 1.02
STRN4-218ENST00000600358 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
STRN4-218ENST00000600358 ZCRB1Q8TBF4 217 aaKnown RBP21.43■■□□□ 1.02
STRN4-218ENST00000600358 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
STRN4-218ENST00000600358 USP35Q9P2H5 1018 aa21.43■■□□□ 1.02
STRN4-218ENST00000600358 CCDC9Q9Y3X0 531 aaKnown RBP21.43■■□□□ 1.02
STRN4-218ENST00000600358 CEMIPQ8WUJ3 1361 aa21.43■■□□□ 1.02
STRN4-218ENST00000600358 GNAT3A8MTJ3 354 aa21.42■■□□□ 1.02
STRN4-218ENST00000600358 RRP7AQ9Y3A4 280 aaKnown RBP21.42■■□□□ 1.02
STRN4-218ENST00000600358 IL16Q14005 1332 aa21.41■■□□□ 1.02
STRN4-218ENST00000600358 ONECUT3O60422 494 aaPredicted RBP21.41■■□□□ 1.02
STRN4-218ENST00000600358 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
STRN4-218ENST00000600358 WDR63Q8IWG1 891 aa21.41■■□□□ 1.02
STRN4-218ENST00000600358 IFNL2Q8IZJ0 200 aa21.41■■□□□ 1.02
STRN4-218ENST00000600358 KDM3BQ7LBC6 1761 aa21.41■■□□□ 1.02
STRN4-218ENST00000600358 KDM6AO15550 1401 aaPredicted RBP21.4■■□□□ 1.02
STRN4-218ENST00000600358 HSP90AB1P08238 724 aaKnown RBP21.4■■□□□ 1.02
STRN4-218ENST00000600358 PHKG2P15735 406 aa21.4■■□□□ 1.02
STRN4-218ENST00000600358 C1orf141Q5JVX7 400 aa21.4■■□□□ 1.02
STRN4-218ENST00000600358 DOT1LQ8TEK3 1739 aa21.4■■□□□ 1.02
STRN4-218ENST00000600358 BRWD3Q6RI45 1802 aa21.39■■□□□ 1.02
STRN4-218ENST00000600358 CYP27B1O15528 508 aa21.39■■□□□ 1.01
STRN4-218ENST00000600358 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
STRN4-218ENST00000600358 NKX1-1Q15270 411 aaPredicted RBP21.39■■□□□ 1.01
STRN4-218ENST00000600358 QTRT2Q9H974 415 aaKnown RBP21.39■■□□□ 1.01
STRN4-218ENST00000600358 ITGB4P16144 1822 aa21.39■■□□□ 1.01
STRN4-218ENST00000600358 PAPPAQ13219 1627 aa21.38■■□□□ 1.01
STRN4-218ENST00000600358 NEUROD2Q15784 382 aa21.38■■□□□ 1.01
STRN4-218ENST00000600358 FAM98CQ17RN3 349 aaKnown RBP21.37■■□□□ 1.01
STRN4-218ENST00000600358 RTF1Q92541 710 aaKnown RBP21.37■■□□□ 1.01
STRN4-218ENST00000600358 EXOC5O00471 708 aa21.36■■□□□ 1.01
STRN4-218ENST00000600358 DDB1Q16531 1140 aa21.36■■□□□ 1.01
STRN4-218ENST00000600358 BCL9O00512 1426 aa21.36■■□□□ 1.01
STRN4-218ENST00000600358 RBM6P78332 1123 aaKnown RBP21.35■■□□□ 1.01
STRN4-218ENST00000600358 GOLGA2Q08379 1002 aa21.35■■□□□ 1.01
STRN4-218ENST00000600358 DCAF5Q96JK2 942 aa21.35■■□□□ 1.01
STRN4-218ENST00000600358 SALL2Q9Y467 1007 aaPredicted RBP21.34■■□□□ 1.01
STRN4-218ENST00000600358 RNMTO43148 476 aaKnown RBP21.33■■□□□ 1.01
STRN4-218ENST00000600358 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
STRN4-218ENST00000600358 RGS17Q9UGC6 210 aaPredicted RBP21.33■■□□□ 1.01
STRN4-218ENST00000600358 SBF2Q86WG5 1849 aa21.33■■□□□ 1.01
STRN4-218ENST00000600358 NHSQ6T4R5 1651 aa21.33■■□□□ 1
STRN4-218ENST00000600358 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
STRN4-218ENST00000600358 E9PSI1 815 aa21.32■■□□□ 1
STRN4-218ENST00000600358 IFT57Q9NWB7 429 aa21.32■■□□□ 1
STRN4-218ENST00000600358 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
STRN4-218ENST00000600358 UBR2Q8IWV8 1755 aa21.32■■□□□ 1
STRN4-218ENST00000600358 ZNF853P0CG23 659 aa21.31■■□□□ 1
STRN4-218ENST00000600358 MCM10Q7L590 875 aa21.31■■□□□ 1
STRN4-218ENST00000600358 TRMT2AQ8IZ69 625 aaKnown RBP21.31■■□□□ 1
STRN4-218ENST00000600358 SLFN5Q08AF3 891 aa21.3■■□□□ 1
STRN4-218ENST00000600358 GNAI1P63096 354 aa21.29■■□□□ 1
STRN4-218ENST00000600358 DCTN1Q14203 1278 aa21.29■■□□□ 1
STRN4-218ENST00000600358 CFAP44Q96MT7 982 aa21.29■■□□□ 1
STRN4-218ENST00000600358 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
STRN4-218ENST00000600358 MPRIPQ6WCQ1 1025 aa21.28■■□□□ 1
STRN4-218ENST00000600358 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
STRN4-218ENST00000600358 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
STRN4-218ENST00000600358 RGS12O14924 1447 aa21.28■■□□□ 1
STRN4-218ENST00000600358 SEPT12Q8IYM1 358 aa21.27■■□□□ 1
STRN4-218ENST00000600358 MARCH10Q8NA82 808 aaPredicted RBP21.27■■□□□ 1
STRN4-218ENST00000600358 DDX54Q8TDD1 881 aaKnown RBP21.27■■□□□ 1
STRN4-218ENST00000600358 LGR6Q9HBX8 967 aa21.27■■□□□ 1
STRN4-218ENST00000600358 CICQ96RK0 1608 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms