RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PTGER2P43116 358 aa25.49■■□□□ 1.67
CCDC9-205ENST00000600117 PPM1GO15355 546 aaPredicted RBP25.48■■□□□ 1.67
CCDC9-205ENST00000600117 MTHFSP49914 203 aa25.48■■□□□ 1.67
CCDC9-205ENST00000600117 HSP90AB2PQ58FF8 381 aa25.48■■□□□ 1.67
CCDC9-205ENST00000600117 PROM2Q8N271 834 aa25.48■■□□□ 1.67
CCDC9-205ENST00000600117 BCL9O00512 1426 aa25.47■■□□□ 1.67
CCDC9-205ENST00000600117 WNK3Q9BYP7 1800 aa25.47■■□□□ 1.67
CCDC9-205ENST00000600117 PTF1AQ7RTS3 328 aa25.47■■□□□ 1.67
CCDC9-205ENST00000600117 ERBB3P21860 1342 aa25.46■■□□□ 1.67
CCDC9-205ENST00000600117 TOM1L2Q6ZVM7 507 aa25.44■■□□□ 1.66
CCDC9-205ENST00000600117 ANKRD24Q8TF21 1146 aa25.44■■□□□ 1.66
CCDC9-205ENST00000600117 MYBBP1AQ9BQG0 1328 aaKnown RBP25.43■■□□□ 1.66
CCDC9-205ENST00000600117 COL3A1P02461 1466 aaPredicted RBP25.43■■□□□ 1.66
CCDC9-205ENST00000600117 MARCH10Q8NA82 808 aaPredicted RBP25.43■■□□□ 1.66
CCDC9-205ENST00000600117 CDCA7Q9BWT1 371 aaPredicted RBP25.43■■□□□ 1.66
CCDC9-205ENST00000600117 ATF5Q9Y2D1 282 aaPredicted RBP25.43■■□□□ 1.66
CCDC9-205ENST00000600117 WDR17Q8IZU2 1322 aa25.42■■□□□ 1.66
CCDC9-205ENST00000600117 SYT17Q9BSW7 474 aa25.42■■□□□ 1.66
CCDC9-205ENST00000600117 STK32BQ9NY57 414 aa25.42■■□□□ 1.66
CCDC9-205ENST00000600117 ANP32CO43423 234 aa25.41■■□□□ 1.66
CCDC9-205ENST00000600117 LTV1Q96GA3 475 aaPredicted RBP25.41■■□□□ 1.66
CCDC9-205ENST00000600117 FHDC1Q9C0D6 1143 aaPredicted RBP25.41■■□□□ 1.66
CCDC9-205ENST00000600117 FAM208AQ9UK61 1670 aaKnown RBP25.4■■□□□ 1.66
CCDC9-205ENST00000600117 SLC15A2Q16348 729 aa25.4■■□□□ 1.66
CCDC9-205ENST00000600117 TXNRD1Q16881 649 aa25.4■■□□□ 1.66
CCDC9-205ENST00000600117 CEP350Q5VT06 3117 aa25.4■■□□□ 1.66
CCDC9-205ENST00000600117 SENP3-EIF4A1A0A087X0R7 540 aa25.39■■□□□ 1.66
CCDC9-205ENST00000600117 EIF4A2Q14240 407 aaKnown RBP25.39■■□□□ 1.66
CCDC9-205ENST00000600117 RGPD2P0DJD1 1756 aa25.39■■□□□ 1.65
CCDC9-205ENST00000600117 DIEXFQ68CQ4 756 aaKnown RBP25.38■■□□□ 1.65
CCDC9-205ENST00000600117 MTFR1LQ9H019 292 aa25.38■■□□□ 1.65
CCDC9-205ENST00000600117 GOLGB1Q14789 3259 aaKnown RBP25.38■■□□□ 1.65
CCDC9-205ENST00000600117 CSB-PGBD3P0DP91 1061 aa25.37■■□□□ 1.65
CCDC9-205ENST00000600117 C1QTNF8P60827 252 aa25.36■■□□□ 1.65
CCDC9-205ENST00000600117 SGIP1Q9BQI5 828 aa25.36■■□□□ 1.65
CCDC9-205ENST00000600117 IL13P35225 146 aa25.35■■□□□ 1.65
CCDC9-205ENST00000600117 CARD10Q9BWT7 1032 aa25.35■■□□□ 1.65
CCDC9-205ENST00000600117 NCAPD2Q15021 1401 aa25.33■■□□□ 1.65
CCDC9-205ENST00000600117 NBPF6Q5VWK0 638 aa25.33■■□□□ 1.65
CCDC9-205ENST00000600117 NBPF4Q96M43 638 aa25.33■■□□□ 1.65
CCDC9-205ENST00000600117 CFAP53Q96M91 514 aa25.33■■□□□ 1.65
CCDC9-205ENST00000600117 NLRP2Q9NX02 1062 aa25.33■■□□□ 1.65
CCDC9-205ENST00000600117 DIAPH1O60610 1272 aaKnown RBP25.31■■□□□ 1.64
CCDC9-205ENST00000600117 EYA1Q99502 592 aa25.31■■□□□ 1.64
CCDC9-205ENST00000600117 MAP3K5Q99683 1374 aa25.31■■□□□ 1.64
CCDC9-205ENST00000600117 EXOC5O00471 708 aa25.3■■□□□ 1.64
CCDC9-205ENST00000600117 IGSF1Q8N6C5 1336 aa25.3■■□□□ 1.64
CCDC9-205ENST00000600117 ARXQ96QS3 562 aa25.29■■□□□ 1.64
CCDC9-205ENST00000600117 USHBP1Q8N6Y0 703 aa25.28■■□□□ 1.64
CCDC9-205ENST00000600117 NHSQ6T4R5 1651 aa25.28■■□□□ 1.64
CCDC9-205ENST00000600117 TNS2Q63HR2 1409 aa25.27■■□□□ 1.64
CCDC9-205ENST00000600117 CCDC184Q52MB2 194 aa25.26■■□□□ 1.63
CCDC9-205ENST00000600117 PAPPAQ13219 1627 aa25.26■■□□□ 1.63
CCDC9-205ENST00000600117 KAT6BQ8WYB5 2073 aa25.22■■□□□ 1.63
CCDC9-205ENST00000600117 KDRP35968 1356 aa25.22■■□□□ 1.63
CCDC9-205ENST00000600117 MEGF6O75095 1541 aa25.22■■□□□ 1.63
CCDC9-205ENST00000600117 IFFO2Q5TF58 517 aa25.21■■□□□ 1.63
CCDC9-205ENST00000600117 AEBP1Q8IUX7 1158 aa25.21■■□□□ 1.63
CCDC9-205ENST00000600117 NUDCQ9Y266 331 aa25.21■■□□□ 1.63
CCDC9-205ENST00000600117 U2SURPO15042 1029 aaKnown RBP25.2■■□□□ 1.62
CCDC9-205ENST00000600117 GPR162Q16538 588 aa25.2■■□□□ 1.62
CCDC9-205ENST00000600117 BTAF1O14981 1849 aa25.2■■□□□ 1.62
CCDC9-205ENST00000600117 IL2RBP14784 551 aa25.19■■□□□ 1.62
CCDC9-205ENST00000600117 SULT6B1Q6IMI4 303 aa25.19■■□□□ 1.62
CCDC9-205ENST00000600117 GIGYF1O75420 1035 aaPredicted RBP25.18■■□□□ 1.62
CCDC9-205ENST00000600117 MIER1Q8N108 512 aa25.18■■□□□ 1.62
CCDC9-205ENST00000600117 ACSBG1Q96GR2 724 aa25.18■■□□□ 1.62
CCDC9-205ENST00000600117 HMOX1P09601 288 aa25.17■■□□□ 1.62
CCDC9-205ENST00000600117 MRS2Q9HD23 443 aa25.16■■□□□ 1.62
CCDC9-205ENST00000600117 QSER1Q2KHR3 1735 aa25.15■■□□□ 1.62
CCDC9-205ENST00000600117 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
CCDC9-205ENST00000600117 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.62
CCDC9-205ENST00000600117 ZNF827Q17R98 1081 aa25.15■■□□□ 1.62
CCDC9-205ENST00000600117 RAPGEF4Q8WZA2 1011 aa25.15■■□□□ 1.62
CCDC9-205ENST00000600117 COL24A1Q17RW2 1714 aa25.15■■□□□ 1.62
CCDC9-205ENST00000600117 TATP17735 454 aaPredicted RBP25.14■■□□□ 1.62
CCDC9-205ENST00000600117 SLC16A10Q8TF71 515 aa25.14■■□□□ 1.62
CCDC9-205ENST00000600117 PKD1L3Q7Z443 1732 aa25.13■■□□□ 1.61
CCDC9-205ENST00000600117 CCER2I3L3R5 266 aa25.13■■□□□ 1.61
CCDC9-205ENST00000600117 RSPH6AQ9H0K4 717 aa25.13■■□□□ 1.61
CCDC9-205ENST00000600117 PLEKHG2Q9H7P9 1386 aa25.13■■□□□ 1.61
CCDC9-205ENST00000600117 LRRC4BQ9NT99 713 aa25.12■■□□□ 1.61
CCDC9-205ENST00000600117 SHANK3Q9BYB0 1731 aa25.12■■□□□ 1.61
CCDC9-205ENST00000600117 PNISRQ8TF01 805 aaKnown RBP25.11■■□□□ 1.61
CCDC9-205ENST00000600117 FCHSD2O94868 740 aa25.1■■□□□ 1.61
CCDC9-205ENST00000600117 POLD1P28340 1107 aa25.1■■□□□ 1.61
CCDC9-205ENST00000600117 WDR43Q15061 677 aaKnown RBP eCLIP25.09■■□□□ 1.61
CCDC9-205ENST00000600117 AKT1S1Q96B36 256 aa25.09■■□□□ 1.61
CCDC9-205ENST00000600117 PRKAR2BP31323 418 aa25.08■■□□□ 1.61
CCDC9-205ENST00000600117 KLHL34Q8N239 644 aa25.08■■□□□ 1.61
CCDC9-205ENST00000600117 ZCRB1Q8TBF4 217 aaKnown RBP25.07■■□□□ 1.6
CCDC9-205ENST00000600117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.07■■□□□ 1.6
CCDC9-205ENST00000600117 ADAMTS8Q9UP79 889 aa25.07■■□□□ 1.6
CCDC9-205ENST00000600117 SLC27A3Q5K4L6 730 aa25.06■■□□□ 1.6
CCDC9-205ENST00000600117 PELP1Q8IZL8 1130 aaKnown RBP25.06■■□□□ 1.6
CCDC9-205ENST00000600117 PLEKHF1Q96S99 279 aa25.05■■□□□ 1.6
CCDC9-205ENST00000600117 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
CCDC9-205ENST00000600117 PLEKHO1Q53GL0 409 aaPredicted RBP25.04■■□□□ 1.6
CCDC9-205ENST00000600117 PHACTR3Q96KR7 559 aa25.04■■□□□ 1.6
CCDC9-205ENST00000600117 PNPLA7Q6ZV29 1317 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms