RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 BAG6P46379 1132 aa16.27■□□□□ 0.2
ARHGEF1-216ENST00000598587 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
ARHGEF1-216ENST00000598587 PCDH11XQ9BZA7 1347 aa16.26■□□□□ 0.19
ARHGEF1-216ENST00000598587 PCDH11YQ9BZA8 1340 aa16.26■□□□□ 0.19
ARHGEF1-216ENST00000598587 MARCH10Q8NA82 808 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF1-216ENST00000598587 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
ARHGEF1-216ENST00000598587 CFAP53Q96M91 514 aa16.26■□□□□ 0.19
ARHGEF1-216ENST00000598587 EYA1Q99502 592 aa16.26■□□□□ 0.19
ARHGEF1-216ENST00000598587 BTAF1O14981 1849 aa16.25■□□□□ 0.19
ARHGEF1-216ENST00000598587 PARD3Q8TEW0 1356 aa16.25■□□□□ 0.19
ARHGEF1-216ENST00000598587 RREB1Q92766 1687 aa16.24■□□□□ 0.19
ARHGEF1-216ENST00000598587 TRIM37O94972 964 aa16.24■□□□□ 0.19
ARHGEF1-216ENST00000598587 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF1-216ENST00000598587 ZNF316A6NFI3 1004 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF1-216ENST00000598587 DIAPH1O60610 1272 aaKnown RBP16.23■□□□□ 0.19
ARHGEF1-216ENST00000598587 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
ARHGEF1-216ENST00000598587 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
ARHGEF1-216ENST00000598587 VIRMAQ69YN4 1812 aaKnown RBP16.23■□□□□ 0.19
ARHGEF1-216ENST00000598587 ITGB4P16144 1822 aa16.22■□□□□ 0.19
ARHGEF1-216ENST00000598587 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
ARHGEF1-216ENST00000598587 IL13P35225 146 aa16.21■□□□□ 0.19
ARHGEF1-216ENST00000598587 RALBP1Q15311 655 aa16.21■□□□□ 0.19
ARHGEF1-216ENST00000598587 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF1-216ENST00000598587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.21■□□□□ 0.19
ARHGEF1-216ENST00000598587 KDRP35968 1356 aa16.21■□□□□ 0.19
ARHGEF1-216ENST00000598587 NUP188Q5SRE5 1749 aa16.2■□□□□ 0.18
ARHGEF1-216ENST00000598587 APBA3O96018 575 aa16.2■□□□□ 0.18
ARHGEF1-216ENST00000598587 TOGARAM1Q9Y4F4 1720 aa16.19■□□□□ 0.18
ARHGEF1-216ENST00000598587 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
ARHGEF1-216ENST00000598587 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
ARHGEF1-216ENST00000598587 SULT6B1Q6IMI4 303 aa16.18■□□□□ 0.18
ARHGEF1-216ENST00000598587 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF1-216ENST00000598587 DEFB132Q7Z7B7 95 aa16.17■□□□□ 0.18
ARHGEF1-216ENST00000598587 SCN11AQ9UI33 1791 aa16.16■□□□□ 0.18
ARHGEF1-216ENST00000598587 U2SURPO15042 1029 aaKnown RBP16.16■□□□□ 0.18
ARHGEF1-216ENST00000598587 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
ARHGEF1-216ENST00000598587 LY75O60449 1722 aa16.15■□□□□ 0.18
ARHGEF1-216ENST00000598587 EN1Q05925 392 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF1-216ENST00000598587 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
ARHGEF1-216ENST00000598587 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
ARHGEF1-216ENST00000598587 PLSCR1O15162 318 aa16.14■□□□□ 0.17
ARHGEF1-216ENST00000598587 HSP90AB1P08238 724 aaKnown RBP16.14■□□□□ 0.17
ARHGEF1-216ENST00000598587 C1orf141Q5JVX7 400 aa16.14■□□□□ 0.17
ARHGEF1-216ENST00000598587 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
ARHGEF1-216ENST00000598587 SYTL4Q96C24 671 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF1-216ENST00000598587 CYP27B1O15528 508 aa16.13■□□□□ 0.17
ARHGEF1-216ENST00000598587 HMOX1P09601 288 aa16.13■□□□□ 0.17
ARHGEF1-216ENST00000598587 KCNQ2O43526 872 aa16.12■□□□□ 0.17
ARHGEF1-216ENST00000598587 PHKG2P15735 406 aa16.12■□□□□ 0.17
ARHGEF1-216ENST00000598587 EZH2Q15910 746 aaKnown RBP16.12■□□□□ 0.17
ARHGEF1-216ENST00000598587 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF1-216ENST00000598587 CAMKK2Q96RR4 588 aa16.12■□□□□ 0.17
ARHGEF1-216ENST00000598587 NKX1-1Q15270 411 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF1-216ENST00000598587 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
ARHGEF1-216ENST00000598587 NEFMP07197 916 aa16.09■□□□□ 0.17
ARHGEF1-216ENST00000598587 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-216ENST00000598587 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
ARHGEF1-216ENST00000598587 DCAF5Q96JK2 942 aa16.09■□□□□ 0.17
ARHGEF1-216ENST00000598587 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-216ENST00000598587 C5P01031 1676 aa16.08■□□□□ 0.17
ARHGEF1-216ENST00000598587 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.17
ARHGEF1-216ENST00000598587 PTF1AQ7RTS3 328 aa16.08■□□□□ 0.16
ARHGEF1-216ENST00000598587 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.16
ARHGEF1-216ENST00000598587 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
ARHGEF1-216ENST00000598587 HMGB2P26583 209 aaKnown RBP16.07■□□□□ 0.16
ARHGEF1-216ENST00000598587 AKAP4Q5JQC9 854 aa16.07■□□□□ 0.16
ARHGEF1-216ENST00000598587 NBPF14Q5TI25 921 aa16.07■□□□□ 0.16
ARHGEF1-216ENST00000598587 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
ARHGEF1-216ENST00000598587 PNNQ9H307 717 aaKnown RBP16.07■□□□□ 0.16
ARHGEF1-216ENST00000598587 TMOD3Q9NYL9 352 aa16.07■□□□□ 0.16
ARHGEF1-216ENST00000598587 QSER1Q2KHR3 1735 aa16.06■□□□□ 0.16
ARHGEF1-216ENST00000598587 PAPPAQ13219 1627 aa16.06■□□□□ 0.16
ARHGEF1-216ENST00000598587 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
ARHGEF1-216ENST00000598587 FCHSD2O94868 740 aa16.06■□□□□ 0.16
ARHGEF1-216ENST00000598587 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
ARHGEF1-216ENST00000598587 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
ARHGEF1-216ENST00000598587 KDM6AO15550 1401 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF1-216ENST00000598587 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
ARHGEF1-216ENST00000598587 TXNRD1Q16881 649 aa16.05■□□□□ 0.16
ARHGEF1-216ENST00000598587 SLC27A3Q5K4L6 730 aa16.05■□□□□ 0.16
ARHGEF1-216ENST00000598587 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF1-216ENST00000598587 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
ARHGEF1-216ENST00000598587 MRC1P22897 1456 aa16.04■□□□□ 0.16
ARHGEF1-216ENST00000598587 ANP32CO43423 234 aa16.04■□□□□ 0.16
ARHGEF1-216ENST00000598587 SIPA1L3O60292 1781 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF1-216ENST00000598587 MAP3K5Q99683 1374 aa16.03■□□□□ 0.16
ARHGEF1-216ENST00000598587 MTHFSDQ2M296 383 aaKnown RBP16.03■□□□□ 0.16
ARHGEF1-216ENST00000598587 PALLDQ8WX93 1383 aa16.02■□□□□ 0.16
ARHGEF1-216ENST00000598587 CABP4P57796 275 aa16.02■□□□□ 0.16
ARHGEF1-216ENST00000598587 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.16
ARHGEF1-216ENST00000598587 TUBGCP6Q96RT7 1819 aa16.01■□□□□ 0.15
ARHGEF1-216ENST00000598587 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
ARHGEF1-216ENST00000598587 GNAT3A8MTJ3 354 aa16.01■□□□□ 0.15
ARHGEF1-216ENST00000598587 PIGBQ92521 554 aa16.01■□□□□ 0.15
ARHGEF1-216ENST00000598587 CICQ96RK0 1608 aaPredicted RBP16■□□□□ 0.15
ARHGEF1-216ENST00000598587 PROM2Q8N271 834 aa15.99■□□□□ 0.15
ARHGEF1-216ENST00000598587 STK32BQ9NY57 414 aa15.99■□□□□ 0.15
ARHGEF1-216ENST00000598587 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF1-216ENST00000598587 CASZ1Q86V15 1759 aa15.99■□□□□ 0.15
ARHGEF1-216ENST00000598587 UBR2Q8IWV8 1755 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms