RNA–Protein interactions for RNA: ENST00000597026.5

COPE-206, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2

Gene COPE, Length 678 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-206ENST00000597026 CGNL1Q0VF96 1302 aa22.36■■□□□ 1.17
COPE-206ENST00000597026 NBPF6Q5VWK0 638 aa22.36■■□□□ 1.17
COPE-206ENST00000597026 PROM2Q8N271 834 aa22.36■■□□□ 1.17
COPE-206ENST00000597026 NBPF4Q96M43 638 aa22.36■■□□□ 1.17
COPE-206ENST00000597026 POLR3GLQ9BT43 218 aa22.36■■□□□ 1.17
COPE-206ENST00000597026 USHBP1Q8N6Y0 703 aa22.35■■□□□ 1.17
COPE-206ENST00000597026 ACSBG1Q96GR2 724 aa22.34■■□□□ 1.17
COPE-206ENST00000597026 NSD2O96028 1365 aa22.33■■□□□ 1.17
COPE-206ENST00000597026 ITGB4P16144 1822 aa22.33■■□□□ 1.16
COPE-206ENST00000597026 QSER1Q2KHR3 1735 aa22.32■■□□□ 1.16
COPE-206ENST00000597026 PANK3Q9H999 370 aa22.3■■□□□ 1.16
COPE-206ENST00000597026 KIF7Q2M1P5 1343 aa22.29■■□□□ 1.16
COPE-206ENST00000597026 TXNRD1Q16881 649 aa22.27■■□□□ 1.16
COPE-206ENST00000597026 DDX54Q8TDD1 881 aaKnown RBP22.27■■□□□ 1.16
COPE-206ENST00000597026 POLKQ9UBT6 870 aa22.27■■□□□ 1.16
COPE-206ENST00000597026 WASHC2AQ641Q2 1341 aa22.26■■□□□ 1.15
COPE-206ENST00000597026 TAF1LQ8IZX4 1826 aa22.25■■□□□ 1.15
COPE-206ENST00000597026 NBPF14Q5TI25 921 aa22.25■■□□□ 1.15
COPE-206ENST00000597026 ZCRB1Q8TBF4 217 aaKnown RBP22.25■■□□□ 1.15
COPE-206ENST00000597026 C5P01031 1676 aa22.23■■□□□ 1.15
COPE-206ENST00000597026 PDGFDQ9GZP0 370 aaPredicted RBP22.23■■□□□ 1.15
COPE-206ENST00000597026 PPM1GO15355 546 aaPredicted RBP22.22■■□□□ 1.15
COPE-206ENST00000597026 COL24A1Q17RW2 1714 aa22.22■■□□□ 1.15
COPE-206ENST00000597026 TNNT2P45379 298 aaPredicted RBP22.21■■□□□ 1.15
COPE-206ENST00000597026 RAPGEF4Q8WZA2 1011 aa22.21■■□□□ 1.15
COPE-206ENST00000597026 LRRC4BQ9NT99 713 aa22.2■■□□□ 1.14
COPE-206ENST00000597026 TATP17735 454 aaPredicted RBP22.19■■□□□ 1.14
COPE-206ENST00000597026 EIF4A2Q14240 407 aaKnown RBP22.19■■□□□ 1.14
COPE-206ENST00000597026 EYA1Q99502 592 aa22.19■■□□□ 1.14
COPE-206ENST00000597026 PCDH11XQ9BZA7 1347 aa22.19■■□□□ 1.14
COPE-206ENST00000597026 PCDH11YQ9BZA8 1340 aa22.19■■□□□ 1.14
COPE-206ENST00000597026 CYP27B1O15528 508 aa22.18■■□□□ 1.14
COPE-206ENST00000597026 PRIM1P49642 420 aaKnown RBP22.18■■□□□ 1.14
COPE-206ENST00000597026 ZNF827Q17R98 1081 aa22.17■■□□□ 1.14
COPE-206ENST00000597026 AMER1Q5JTC6 1135 aaPredicted RBP22.17■■□□□ 1.14
COPE-206ENST00000597026 SLC15A2Q16348 729 aa22.16■■□□□ 1.14
COPE-206ENST00000597026 VIRMAQ69YN4 1812 aaKnown RBP22.15■■□□□ 1.14
COPE-206ENST00000597026 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
COPE-206ENST00000597026 SYTL4Q96C24 671 aaPredicted RBP22.14■■□□□ 1.13
COPE-206ENST00000597026 STK32BQ9NY57 414 aa22.13■■□□□ 1.13
COPE-206ENST00000597026 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
COPE-206ENST00000597026 UTRNP46939 3433 aa22.12■■□□□ 1.13
COPE-206ENST00000597026 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
COPE-206ENST00000597026 KCNQ4P56696 695 aa22.11■■□□□ 1.13
COPE-206ENST00000597026 KNSTRNQ9Y448 316 aa22.11■■□□□ 1.13
COPE-206ENST00000597026 C4BP0C0L5 1744 aa22.1■■□□□ 1.13
COPE-206ENST00000597026 UBR3Q6ZT12 1888 aa22.1■■□□□ 1.13
COPE-206ENST00000597026 MORC1Q86VD1 984 aa22.1■■□□□ 1.13
COPE-206ENST00000597026 AKT1S1Q96B36 256 aa22.1■■□□□ 1.13
COPE-206ENST00000597026 SPON1Q9HCB6 807 aa22.1■■□□□ 1.13
COPE-206ENST00000597026 ZBTB7AO95365 584 aa22.09■■□□□ 1.13
COPE-206ENST00000597026 SLC27A3Q5K4L6 730 aa22.09■■□□□ 1.13
COPE-206ENST00000597026 GOLGB1Q14789 3259 aaKnown RBP22.09■■□□□ 1.13
COPE-206ENST00000597026 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
COPE-206ENST00000597026 SCN11AQ9UI33 1791 aa22.08■■□□□ 1.13
COPE-206ENST00000597026 PTGER2P43116 358 aa22.08■■□□□ 1.13
COPE-206ENST00000597026 NKX1-1Q15270 411 aaPredicted RBP22.07■■□□□ 1.12
COPE-206ENST00000597026 AEBP1Q8IUX7 1158 aa22.06■■□□□ 1.12
COPE-206ENST00000597026 SGIP1Q9BQI5 828 aa22.06■■□□□ 1.12
COPE-206ENST00000597026 KDRP35968 1356 aa22.06■■□□□ 1.12
COPE-206ENST00000597026 PALLDQ8WX93 1383 aa22.06■■□□□ 1.12
COPE-206ENST00000597026 COL5A3P25940 1745 aaPredicted RBP22.06■■□□□ 1.12
COPE-206ENST00000597026 KDM6AO15550 1401 aaPredicted RBP22.06■■□□□ 1.12
COPE-206ENST00000597026 ZNF831Q5JPB2 1677 aa22.05■■□□□ 1.12
COPE-206ENST00000597026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.05■■□□□ 1.12
COPE-206ENST00000597026 PNPLA7Q6ZV29 1317 aa22.05■■□□□ 1.12
COPE-206ENST00000597026 NPC1L1Q9UHC9 1359 aa22.04■■□□□ 1.12
COPE-206ENST00000597026 PHKG2P15735 406 aa22.04■■□□□ 1.12
COPE-206ENST00000597026 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
COPE-206ENST00000597026 CCNL1Q9UK58 526 aaPredicted RBP22.03■■□□□ 1.12
COPE-206ENST00000597026 ADAMTS7Q9UKP4 1686 aa22.03■■□□□ 1.12
COPE-206ENST00000597026 MPRIPQ6WCQ1 1025 aa22.02■■□□□ 1.12
COPE-206ENST00000597026 ATF5Q9Y2D1 282 aaPredicted RBP22.02■■□□□ 1.12
COPE-206ENST00000597026 IL13P35225 146 aa22.01■■□□□ 1.11
COPE-206ENST00000597026 PIGBQ92521 554 aa22.01■■□□□ 1.11
COPE-206ENST00000597026 MTFR1LQ9H019 292 aa22.01■■□□□ 1.11
COPE-206ENST00000597026 CICQ96RK0 1608 aaPredicted RBP22■■□□□ 1.11
COPE-206ENST00000597026 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
COPE-206ENST00000597026 TJP1Q07157 1748 aa21.98■■□□□ 1.11
COPE-206ENST00000597026 IFNL2Q8IZJ0 200 aa21.98■■□□□ 1.11
COPE-206ENST00000597026 PPP1R1BQ9UD71 204 aaPredicted RBP21.98■■□□□ 1.11
COPE-206ENST00000597026 MTHFSP49914 203 aa21.97■■□□□ 1.11
COPE-206ENST00000597026 MRC1P22897 1456 aa21.96■■□□□ 1.11
COPE-206ENST00000597026 AMIGO3Q86WK7 504 aa21.95■■□□□ 1.1
COPE-206ENST00000597026 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
COPE-206ENST00000597026 SULT6B1Q6IMI4 303 aa21.94■■□□□ 1.1
COPE-206ENST00000597026 TFCP2L1Q9NZI6 479 aa21.94■■□□□ 1.1
COPE-206ENST00000597026 ZNF530Q6P9A1 599 aaPredicted RBP21.93■■□□□ 1.1
COPE-206ENST00000597026 MYH14Q7Z406 1995 aaKnown RBP21.93■■□□□ 1.1
COPE-206ENST00000597026 TMOD3Q9NYL9 352 aa21.93■■□□□ 1.1
COPE-206ENST00000597026 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
COPE-206ENST00000597026 SIPA1L3O60292 1781 aaPredicted RBP21.92■■□□□ 1.1
COPE-206ENST00000597026 MAP3K5Q99683 1374 aa21.92■■□□□ 1.1
COPE-206ENST00000597026 UBR2Q8IWV8 1755 aa21.92■■□□□ 1.1
COPE-206ENST00000597026 COL23A1Q86Y22 540 aaPredicted RBP21.91■■□□□ 1.1
COPE-206ENST00000597026 SMARCC1Q92922 1105 aaPredicted RBP21.91■■□□□ 1.1
COPE-206ENST00000597026 FHDC1Q9C0D6 1143 aaPredicted RBP21.91■■□□□ 1.1
COPE-206ENST00000597026 PLEKHO1Q53GL0 409 aaPredicted RBP21.9■■□□□ 1.1
COPE-206ENST00000597026 LINC00116Q8NCU8 138 aa21.9■■□□□ 1.1
COPE-206ENST00000597026 ATG3Q9NT62 314 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms