RNA–Protein interactions for RNA: ENST00000592783.5

GRN-220, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-220ENST00000592783 PLEKHO1Q53GL0 409 aaPredicted RBP20.37■□□□□ 0.85
GRN-220ENST00000592783 MEGF6O75095 1541 aa20.37■□□□□ 0.85
GRN-220ENST00000592783 OVOS2A0A0G2JMS6 1433 aa20.36■□□□□ 0.85
GRN-220ENST00000592783 NGEFQ8N5V2 710 aa20.36■□□□□ 0.85
GRN-220ENST00000592783 GAS2L2Q8NHY3 880 aa20.36■□□□□ 0.85
GRN-220ENST00000592783 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
GRN-220ENST00000592783 BARGINQ6ZT62 677 aa20.35■□□□□ 0.85
GRN-220ENST00000592783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.35■□□□□ 0.85
GRN-220ENST00000592783 SPG7Q9UQ90 795 aa20.35■□□□□ 0.85
GRN-220ENST00000592783 QTRT2Q9H974 415 aaKnown RBP20.34■□□□□ 0.85
GRN-220ENST00000592783 DISP2A7MBM2 1401 aa20.34■□□□□ 0.85
GRN-220ENST00000592783 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
GRN-220ENST00000592783 GLI3P10071 1580 aa20.34■□□□□ 0.85
GRN-220ENST00000592783 APAF1O14727 1248 aa20.33■□□□□ 0.85
GRN-220ENST00000592783 HNRNPUQ00839 825 aaKnown RBP eCLIP20.33■□□□□ 0.85
GRN-220ENST00000592783 NFE2L2Q16236 605 aa20.33■□□□□ 0.85
GRN-220ENST00000592783 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.85
GRN-220ENST00000592783 PHACTR3Q96KR7 559 aa20.33■□□□□ 0.85
GRN-220ENST00000592783 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
GRN-220ENST00000592783 LMOD3Q0VAK6 560 aa20.31■□□□□ 0.84
GRN-220ENST00000592783 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
GRN-220ENST00000592783 SHANK3Q9BYB0 1731 aa20.3■□□□□ 0.84
GRN-220ENST00000592783 PCDH11XQ9BZA7 1347 aa20.3■□□□□ 0.84
GRN-220ENST00000592783 PCDH11YQ9BZA8 1340 aa20.3■□□□□ 0.84
GRN-220ENST00000592783 THSD7AQ9UPZ6 1657 aa20.3■□□□□ 0.84
GRN-220ENST00000592783 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
GRN-220ENST00000592783 C1orf141Q5JVX7 400 aa20.3■□□□□ 0.84
GRN-220ENST00000592783 ZNF530Q6P9A1 599 aaPredicted RBP20.3■□□□□ 0.84
GRN-220ENST00000592783 ZCRB1Q8TBF4 217 aaKnown RBP20.3■□□□□ 0.84
GRN-220ENST00000592783 TNS2Q63HR2 1409 aa20.29■□□□□ 0.84
GRN-220ENST00000592783 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
GRN-220ENST00000592783 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
GRN-220ENST00000592783 A0A0G2JS52 829 aa20.28■□□□□ 0.84
GRN-220ENST00000592783 RIPK4P57078 832 aa20.28■□□□□ 0.84
GRN-220ENST00000592783 MYT1Q01538 1121 aa20.28■□□□□ 0.84
GRN-220ENST00000592783 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
GRN-220ENST00000592783 FAM98CQ17RN3 349 aaKnown RBP20.28■□□□□ 0.84
GRN-220ENST00000592783 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
GRN-220ENST00000592783 KAT6BQ8WYB5 2073 aa20.27■□□□□ 0.84
GRN-220ENST00000592783 EXOC5O00471 708 aa20.27■□□□□ 0.84
GRN-220ENST00000592783 RBM6P78332 1123 aaKnown RBP20.27■□□□□ 0.84
GRN-220ENST00000592783 DDB1Q16531 1140 aa20.27■□□□□ 0.84
GRN-220ENST00000592783 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.84
GRN-220ENST00000592783 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
GRN-220ENST00000592783 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
GRN-220ENST00000592783 RTF1Q92541 710 aaKnown RBP20.26■□□□□ 0.83
GRN-220ENST00000592783 SCN11AQ9UI33 1791 aa20.26■□□□□ 0.83
GRN-220ENST00000592783 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
GRN-220ENST00000592783 HSP90AB1P08238 724 aaKnown RBP20.25■□□□□ 0.83
GRN-220ENST00000592783 CCDC27Q2M243 656 aa20.25■□□□□ 0.83
GRN-220ENST00000592783 IFNL2Q8IZJ0 200 aa20.25■□□□□ 0.83
GRN-220ENST00000592783 ZBED9Q6R2W3 1325 aa20.24■□□□□ 0.83
GRN-220ENST00000592783 RXRBP28702 533 aa20.23■□□□□ 0.83
GRN-220ENST00000592783 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
GRN-220ENST00000592783 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
GRN-220ENST00000592783 PHKG2P15735 406 aa20.22■□□□□ 0.83
GRN-220ENST00000592783 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
GRN-220ENST00000592783 BRWD3Q6RI45 1802 aa20.21■□□□□ 0.83
GRN-220ENST00000592783 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
GRN-220ENST00000592783 DDX54Q8TDD1 881 aaKnown RBP20.21■□□□□ 0.83
GRN-220ENST00000592783 RGS17Q9UGC6 210 aaPredicted RBP20.21■□□□□ 0.83
GRN-220ENST00000592783 ADAMTS7Q9UKP4 1686 aa20.21■□□□□ 0.83
GRN-220ENST00000592783 CYP27B1O15528 508 aa20.2■□□□□ 0.82
GRN-220ENST00000592783 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
GRN-220ENST00000592783 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
GRN-220ENST00000592783 SEPT12Q8IYM1 358 aa20.19■□□□□ 0.82
GRN-220ENST00000592783 DCAF5Q96JK2 942 aa20.19■□□□□ 0.82
GRN-220ENST00000592783 TRIM35Q9UPQ4 493 aa20.19■□□□□ 0.82
GRN-220ENST00000592783 WDR63Q8IWG1 891 aa20.18■□□□□ 0.82
GRN-220ENST00000592783 ITGB4P16144 1822 aa20.16■□□□□ 0.82
GRN-220ENST00000592783 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
GRN-220ENST00000592783 NKX1-1Q15270 411 aaPredicted RBP20.16■□□□□ 0.82
GRN-220ENST00000592783 POTEAQ6S8J7 498 aa20.16■□□□□ 0.82
GRN-220ENST00000592783 MPRIPQ6WCQ1 1025 aa20.16■□□□□ 0.82
GRN-220ENST00000592783 MCM10Q7L590 875 aa20.16■□□□□ 0.82
GRN-220ENST00000592783 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
GRN-220ENST00000592783 SIPA1L3O60292 1781 aaPredicted RBP20.16■□□□□ 0.82
GRN-220ENST00000592783 GOLGA2Q08379 1002 aa20.15■□□□□ 0.82
GRN-220ENST00000592783 TEFQ10587 303 aa20.15■□□□□ 0.82
GRN-220ENST00000592783 IL16Q14005 1332 aa20.15■□□□□ 0.82
GRN-220ENST00000592783 ZNF521Q96K83 1311 aa20.15■□□□□ 0.82
GRN-220ENST00000592783 CEMIPQ8WUJ3 1361 aa20.15■□□□□ 0.82
GRN-220ENST00000592783 TOGARAM1Q9Y4F4 1720 aa20.14■□□□□ 0.81
GRN-220ENST00000592783 KDM6AO15550 1401 aaPredicted RBP20.14■□□□□ 0.81
GRN-220ENST00000592783 MRC1P22897 1456 aa20.13■□□□□ 0.81
GRN-220ENST00000592783 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
GRN-220ENST00000592783 MARCH10Q8NA82 808 aaPredicted RBP20.13■□□□□ 0.81
GRN-220ENST00000592783 RGS12O14924 1447 aa20.12■□□□□ 0.81
GRN-220ENST00000592783 ERVV-2B6SEH9 535 aa20.12■□□□□ 0.81
GRN-220ENST00000592783 GNAI1P63096 354 aa20.12■□□□□ 0.81
GRN-220ENST00000592783 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
GRN-220ENST00000592783 KRT27Q7Z3Y8 459 aa20.11■□□□□ 0.81
GRN-220ENST00000592783 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
GRN-220ENST00000592783 MYH16Q9H6N6 1097 aa20.11■□□□□ 0.81
GRN-220ENST00000592783 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
GRN-220ENST00000592783 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
GRN-220ENST00000592783 E9PSI1 815 aa20.1■□□□□ 0.81
GRN-220ENST00000592783 CABP4P57796 275 aa20.1■□□□□ 0.81
GRN-220ENST00000592783 SLC52A2Q9HAB3 445 aa20.1■□□□□ 0.81
GRN-220ENST00000592783 IFT57Q9NWB7 429 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms