RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 NFXL1Q6ZNB6 911 aa15.16■□□□□ 0.02
DNMT1-228ENST00000592705 SSH1Q8WYL5 1049 aa15.16■□□□□ 0.02
DNMT1-228ENST00000592705 UHRF1BP1LA0JNW5 1464 aa15.16■□□□□ 0.02
DNMT1-228ENST00000592705 TTLL12Q14166 644 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-228ENST00000592705 AMOTQ4VCS5 1084 aa15.15■□□□□ 0.02
DNMT1-228ENST00000592705 CYP46A1Q9Y6A2 500 aa15.15■□□□□ 0.02
DNMT1-228ENST00000592705 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
DNMT1-228ENST00000592705 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
DNMT1-228ENST00000592705 CCDC70Q6NSX1 233 aa15.15■□□□□ 0.02
DNMT1-228ENST00000592705 ZSCAN29Q8IWY8 852 aaPredicted RBP15.15■□□□□ 0.02
DNMT1-228ENST00000592705 GPATCH8Q9UKJ3 1502 aaKnown RBP15.15■□□□□ 0.02
DNMT1-228ENST00000592705 CFAP43Q8NDM7 1665 aa15.15■□□□□ 0.02
DNMT1-228ENST00000592705 FIBPO43427 364 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 TRIM5Q9C035 493 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 ESPNB1AK53 854 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 IGHMBP2P38935 993 aaKnown RBP15.14■□□□□ 0.01
DNMT1-228ENST00000592705 FOSBP53539 338 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 ANKRD1Q15327 319 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 TEX35Q5T0J7 233 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 NSD2O96028 1365 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 BTBD11A6QL63 1104 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 SDF4Q9BRK5 362 aa15.14■□□□□ 0.01
DNMT1-228ENST00000592705 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
DNMT1-228ENST00000592705 WASLO00401 505 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-228ENST00000592705 MYL6BP14649 208 aa15.13■□□□□ 0.01
DNMT1-228ENST00000592705 ARGLU1Q9NWB6 273 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-228ENST00000592705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-228ENST00000592705 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
DNMT1-228ENST00000592705 CCDC57Q2TAC2 916 aa15.13■□□□□ 0.01
DNMT1-228ENST00000592705 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
DNMT1-228ENST00000592705 CCDC47Q96A33 483 aaKnown RBP15.13■□□□□ 0.01
DNMT1-228ENST00000592705 IPO7O95373 1038 aaKnown RBP15.12■□□□□ 0.01
DNMT1-228ENST00000592705 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
DNMT1-228ENST00000592705 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
DNMT1-228ENST00000592705 KINO60870 393 aaKnown RBP15.12■□□□□ 0.01
DNMT1-228ENST00000592705 CCDC192P0DO97 292 aa15.12■□□□□ 0.01
DNMT1-228ENST00000592705 RFC4P35249 363 aa15.12■□□□□ 0.01
DNMT1-228ENST00000592705 CEP89Q96ST8 783 aa15.12■□□□□ 0.01
DNMT1-228ENST00000592705 WDR7Q9Y4E6 1490 aa15.12■□□□□ 0.01
DNMT1-228ENST00000592705 DDB1Q16531 1140 aa15.11■□□□□ 0.01
DNMT1-228ENST00000592705 OLFM4Q6UX06 510 aa15.11■□□□□ 0.01
DNMT1-228ENST00000592705 MNS1Q8NEH6 495 aa15.11■□□□□ 0.01
DNMT1-228ENST00000592705 ZNF396Q96N95 335 aaPredicted RBP15.11■□□□□ 0.01
DNMT1-228ENST00000592705 ADGRF5Q8IZF2 1346 aa15.11■□□□□ 0.01
DNMT1-228ENST00000592705 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
DNMT1-228ENST00000592705 CCDC158Q5M9N0 1113 aa15.11■□□□□ 0.01
DNMT1-228ENST00000592705 CHRNA2Q15822 529 aa15.1■□□□□ 0.01
DNMT1-228ENST00000592705 ZSCAN31Q96LW9 406 aaPredicted RBP15.1■□□□□ 0.01
DNMT1-228ENST00000592705 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
DNMT1-228ENST00000592705 NUP160Q12769 1436 aa15.1■□□□□ 0.01
DNMT1-228ENST00000592705 PDIA4P13667 645 aaKnown RBP15.1■□□□□ 0.01
DNMT1-228ENST00000592705 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
DNMT1-228ENST00000592705 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
DNMT1-228ENST00000592705 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
DNMT1-228ENST00000592705 KRT85P78386 507 aa15.09■□□□□ 0.01
DNMT1-228ENST00000592705 ATP2B2Q01814 1243 aa15.09■□□□□ 0.01
DNMT1-228ENST00000592705 TEX13AQ9BXU3 409 aaPredicted RBP15.09■□□□□ 0.01
DNMT1-228ENST00000592705 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
DNMT1-228ENST00000592705 RAPGEF6Q8TEU7 1601 aa15.09■□□□□ 0.01
DNMT1-228ENST00000592705 TRIM27P14373 513 aa15.09■□□□□ 0.01
DNMT1-228ENST00000592705 HSP90AB3PQ58FF7 597 aa15.09■□□□□ 0.01
DNMT1-228ENST00000592705 IGHDP01880 384 aa15.08■□□□□ 0.01
DNMT1-228ENST00000592705 A0A087WZG4 1122 aa15.08■□□□□ 0
DNMT1-228ENST00000592705 WWC2Q6AWC2 1192 aa15.08■□□□□ 0
DNMT1-228ENST00000592705 MTMR7Q9Y216 660 aa15.08■□□□□ 0
DNMT1-228ENST00000592705 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 03e-7■■□□□ 13.7
DNMT1-228ENST00000592705 STK32BQ9NY57 414 aa15.08■□□□□ 0
DNMT1-228ENST00000592705 BAG6P46379 1132 aa15.08■□□□□ 0
DNMT1-228ENST00000592705 SART3Q15020 963 aaKnown RBP15.08■□□□□ 0
DNMT1-228ENST00000592705 ZNF518AQ6AHZ1 1483 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 TBC1D32Q96NH3 1257 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 ZSCAN30Q86W11 494 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 PCMTD1Q96MG8 357 aaPredicted RBP15.07■□□□□ 0
DNMT1-228ENST00000592705 IL16Q14005 1332 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 ASXL1Q8IXJ9 1541 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 SRGAP3O43295 1099 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 DHX8Q14562 1220 aaKnown RBP15.07■□□□□ 0
DNMT1-228ENST00000592705 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 CCP110O43303 1012 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 PDRG1Q9NUG6 133 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 PRAG1Q86YV5 1406 aa15.07■□□□□ 0
DNMT1-228ENST00000592705 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
DNMT1-228ENST00000592705 TNMDQ9H2S6 317 aa15.06■□□□□ 0
DNMT1-228ENST00000592705 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
DNMT1-228ENST00000592705 TTC39AQ5SRH9 613 aa15.06■□□□□ 0
DNMT1-228ENST00000592705 THUMPD2Q9BTF0 503 aaKnown RBP15.06■□□□□ 0
DNMT1-228ENST00000592705 TFCP2L1Q9NZI6 479 aa15.06■□□□□ 0
DNMT1-228ENST00000592705 PLCH2O75038 1416 aa15.06■□□□□ 0
DNMT1-228ENST00000592705 MAP4K4O95819 1239 aaPredicted RBP15.06■□□□□ 0
DNMT1-228ENST00000592705 IFNL2Q8IZJ0 200 aa15.06■□□□□ 0
DNMT1-228ENST00000592705 BMP2KLQ5H9B9 411 aa15.05■□□□□ 0
DNMT1-228ENST00000592705 XBP1P17861 261 aa15.05■□□□□ -0
DNMT1-228ENST00000592705 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.05■□□□□ -06e-7■■■□□ 15.2
DNMT1-228ENST00000592705 ANKIB1Q9P2G1 1089 aa15.05■□□□□ -0
DNMT1-228ENST00000592705 MX1P20591 662 aa15.05■□□□□ -0
DNMT1-228ENST00000592705 C14orf93Q9H972 538 aaKnown RBP15.05■□□□□ -0
DNMT1-228ENST00000592705 BRMS1Q9HCU9 246 aa15.05■□□□□ -0
DNMT1-228ENST00000592705 TNPO1Q92973 898 aaKnown RBP15.04■□□□□ -0
DNMT1-228ENST00000592705 RAB11FIP3O75154 756 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 STK38Q15208 465 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms