RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
SCAMP4-212ENST00000590266 RGPD2P0DJD1 1756 aa19.03■□□□□ 0.64
SCAMP4-212ENST00000590266 SYTL4Q96C24 671 aaPredicted RBP19.02■□□□□ 0.64
SCAMP4-212ENST00000590266 TNS1Q9HBL0 1735 aaKnown RBP19.02■□□□□ 0.63
SCAMP4-212ENST00000590266 CAMKK2Q96RR4 588 aa19.01■□□□□ 0.63
SCAMP4-212ENST00000590266 NPC1L1Q9UHC9 1359 aa19.01■□□□□ 0.63
SCAMP4-212ENST00000590266 BCL9O00512 1426 aa19■□□□□ 0.63
SCAMP4-212ENST00000590266 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
SCAMP4-212ENST00000590266 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
SCAMP4-212ENST00000590266 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
SCAMP4-212ENST00000590266 MAP2P11137 1827 aaKnown RBP18.99■□□□□ 0.63
SCAMP4-212ENST00000590266 IGSF1Q8N6C5 1336 aa18.99■□□□□ 0.63
SCAMP4-212ENST00000590266 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
SCAMP4-212ENST00000590266 SPG7Q9UQ90 795 aa18.98■□□□□ 0.63
SCAMP4-212ENST00000590266 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-212ENST00000590266 NCAPD2Q15021 1401 aa18.97■□□□□ 0.63
SCAMP4-212ENST00000590266 IL13P35225 146 aa18.96■□□□□ 0.63
SCAMP4-212ENST00000590266 PRIM1P49642 420 aaKnown RBP18.96■□□□□ 0.63
SCAMP4-212ENST00000590266 AEBP1Q8IUX7 1158 aa18.96■□□□□ 0.63
SCAMP4-212ENST00000590266 CYP27B1O15528 508 aa18.95■□□□□ 0.62
SCAMP4-212ENST00000590266 SULT6B1Q6IMI4 303 aa18.95■□□□□ 0.62
SCAMP4-212ENST00000590266 PLSCR1O15162 318 aa18.94■□□□□ 0.62
SCAMP4-212ENST00000590266 DIAPH1O60610 1272 aaKnown RBP18.94■□□□□ 0.62
SCAMP4-212ENST00000590266 HMOX1P09601 288 aa18.93■□□□□ 0.62
SCAMP4-212ENST00000590266 U2SURPO15042 1029 aaKnown RBP18.92■□□□□ 0.62
SCAMP4-212ENST00000590266 PPP2R1AP30153 589 aa18.91■□□□□ 0.62
SCAMP4-212ENST00000590266 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
SCAMP4-212ENST00000590266 NHSQ6T4R5 1651 aa18.91■□□□□ 0.62
SCAMP4-212ENST00000590266 TXNRD1Q16881 649 aa18.9■□□□□ 0.62
SCAMP4-212ENST00000590266 PLEKHO1Q53GL0 409 aaPredicted RBP18.9■□□□□ 0.62
SCAMP4-212ENST00000590266 SHANK3Q9BYB0 1731 aa18.89■□□□□ 0.61
SCAMP4-212ENST00000590266 PHKG2P15735 406 aa18.89■□□□□ 0.61
SCAMP4-212ENST00000590266 ZNF530Q6P9A1 599 aaPredicted RBP18.89■□□□□ 0.61
SCAMP4-212ENST00000590266 MPRIPQ6WCQ1 1025 aa18.89■□□□□ 0.61
SCAMP4-212ENST00000590266 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
SCAMP4-212ENST00000590266 PROM2Q8N271 834 aa18.89■□□□□ 0.61
SCAMP4-212ENST00000590266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.89■□□□□ 0.61
SCAMP4-212ENST00000590266 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
SCAMP4-212ENST00000590266 LRP5O75197 1615 aa18.87■□□□□ 0.61
SCAMP4-212ENST00000590266 DOT1LQ8TEK3 1739 aa18.87■□□□□ 0.61
SCAMP4-212ENST00000590266 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
SCAMP4-212ENST00000590266 C1orf141Q5JVX7 400 aa18.86■□□□□ 0.61
SCAMP4-212ENST00000590266 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
SCAMP4-212ENST00000590266 COL3A1P02461 1466 aaPredicted RBP18.85■□□□□ 0.61
SCAMP4-212ENST00000590266 KDRP35968 1356 aa18.85■□□□□ 0.61
SCAMP4-212ENST00000590266 KCNQ4P56696 695 aa18.85■□□□□ 0.61
SCAMP4-212ENST00000590266 ANO8Q9HCE9 1232 aaPredicted RBP18.85■□□□□ 0.61
SCAMP4-212ENST00000590266 NKX1-1Q15270 411 aaPredicted RBP18.84■□□□□ 0.61
SCAMP4-212ENST00000590266 RREB1Q92766 1687 aa18.84■□□□□ 0.61
SCAMP4-212ENST00000590266 NUP188Q5SRE5 1749 aa18.83■□□□□ 0.61
SCAMP4-212ENST00000590266 STK32BQ9NY57 414 aa18.83■□□□□ 0.6
SCAMP4-212ENST00000590266 TMOD3Q9NYL9 352 aa18.83■□□□□ 0.6
SCAMP4-212ENST00000590266 PPP1R1BQ9UD71 204 aaPredicted RBP18.83■□□□□ 0.6
SCAMP4-212ENST00000590266 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
SCAMP4-212ENST00000590266 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
SCAMP4-212ENST00000590266 BTAF1O14981 1849 aa18.81■□□□□ 0.6
SCAMP4-212ENST00000590266 HSP90AB1P08238 724 aaKnown RBP18.81■□□□□ 0.6
SCAMP4-212ENST00000590266 U2AF1L5P0DN76 240 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-212ENST00000590266 U2AF1Q01081 240 aaKnown RBP eCLIP18.81■□□□□ 0.6
SCAMP4-212ENST00000590266 PIGBQ92521 554 aa18.81■□□□□ 0.6
SCAMP4-212ENST00000590266 DCAF5Q96JK2 942 aa18.81■□□□□ 0.6
SCAMP4-212ENST00000590266 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
SCAMP4-212ENST00000590266 SPON1Q9HCB6 807 aa18.8■□□□□ 0.6
SCAMP4-212ENST00000590266 CCNL1Q9UK58 526 aaPredicted RBP18.8■□□□□ 0.6
SCAMP4-212ENST00000590266 RGPD3A6NKT7 1758 aaPredicted RBP18.8■□□□□ 0.6
SCAMP4-212ENST00000590266 RGPD4Q7Z3J3 1758 aa18.8■□□□□ 0.6
SCAMP4-212ENST00000590266 PALLDQ8WX93 1383 aa18.8■□□□□ 0.6
SCAMP4-212ENST00000590266 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
SCAMP4-212ENST00000590266 CABP4P57796 275 aa18.78■□□□□ 0.6
SCAMP4-212ENST00000590266 RALBP1Q15311 655 aa18.78■□□□□ 0.6
SCAMP4-212ENST00000590266 SLC15A2Q16348 729 aa18.78■□□□□ 0.6
SCAMP4-212ENST00000590266 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
SCAMP4-212ENST00000590266 SLC27A3Q5K4L6 730 aa18.78■□□□□ 0.6
SCAMP4-212ENST00000590266 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
SCAMP4-212ENST00000590266 KDM6AO15550 1401 aaPredicted RBP18.77■□□□□ 0.6
SCAMP4-212ENST00000590266 PRKAR2BP31323 418 aa18.77■□□□□ 0.6
SCAMP4-212ENST00000590266 AKAP4Q5JQC9 854 aa18.77■□□□□ 0.6
SCAMP4-212ENST00000590266 ZNF827Q17R98 1081 aa18.76■□□□□ 0.59
SCAMP4-212ENST00000590266 SMARCC1Q92922 1105 aaPredicted RBP18.76■□□□□ 0.59
SCAMP4-212ENST00000590266 ASAP1Q9ULH1 1129 aa18.76■□□□□ 0.59
SCAMP4-212ENST00000590266 ERVV-2B6SEH9 535 aa18.75■□□□□ 0.59
SCAMP4-212ENST00000590266 RSPH6AQ9H0K4 717 aa18.75■□□□□ 0.59
SCAMP4-212ENST00000590266 DCAF8L1A6NGE4 600 aa18.74■□□□□ 0.59
SCAMP4-212ENST00000590266 PDGFDQ9GZP0 370 aaPredicted RBP18.74■□□□□ 0.59
SCAMP4-212ENST00000590266 NFATC2IPQ8NCF5 419 aa18.73■□□□□ 0.59
SCAMP4-212ENST00000590266 LGR6Q9HBX8 967 aa18.73■□□□□ 0.59
SCAMP4-212ENST00000590266 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
SCAMP4-212ENST00000590266 MYBBP1AQ9BQG0 1328 aaKnown RBP18.73■□□□□ 0.59
SCAMP4-212ENST00000590266 GAS2L2Q8NHY3 880 aa18.72■□□□□ 0.59
SCAMP4-212ENST00000590266 PHACTR3Q96KR7 559 aa18.72■□□□□ 0.59
SCAMP4-212ENST00000590266 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
SCAMP4-212ENST00000590266 ATG3Q9NT62 314 aa18.72■□□□□ 0.59
SCAMP4-212ENST00000590266 KAT6BQ8WYB5 2073 aa18.71■□□□□ 0.59
SCAMP4-212ENST00000590266 RNMTO43148 476 aaKnown RBP18.71■□□□□ 0.59
SCAMP4-212ENST00000590266 ZBTB7AO95365 584 aa18.71■□□□□ 0.59
SCAMP4-212ENST00000590266 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
SCAMP4-212ENST00000590266 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
SCAMP4-212ENST00000590266 FCHSD2O94868 740 aa18.7■□□□□ 0.58
SCAMP4-212ENST00000590266 SIK1P57059 783 aa18.7■□□□□ 0.58
SCAMP4-212ENST00000590266 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms