RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
APOC1-203ENST00000588802 NBPF6Q5VWK0 638 aa13.92□□□□□ -0.18
APOC1-203ENST00000588802 NBPF4Q96M43 638 aa13.92□□□□□ -0.18
APOC1-203ENST00000588802 KCNQ4P56696 695 aa13.91□□□□□ -0.18
APOC1-203ENST00000588802 CCDC184Q52MB2 194 aa13.91□□□□□ -0.18
APOC1-203ENST00000588802 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
APOC1-203ENST00000588802 ZCRB1Q8TBF4 217 aaKnown RBP13.91□□□□□ -0.18
APOC1-203ENST00000588802 CARD14Q9BXL6 1004 aa13.91□□□□□ -0.18
APOC1-203ENST00000588802 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
APOC1-203ENST00000588802 PPM1GO15355 546 aaPredicted RBP13.9□□□□□ -0.18
APOC1-203ENST00000588802 PRIM1P49642 420 aaKnown RBP13.9□□□□□ -0.18
APOC1-203ENST00000588802 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
APOC1-203ENST00000588802 RTL1A6NKG5 1358 aa13.89□□□□□ -0.19
APOC1-203ENST00000588802 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
APOC1-203ENST00000588802 ZNF827Q17R98 1081 aa13.89□□□□□ -0.19
APOC1-203ENST00000588802 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
APOC1-203ENST00000588802 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
APOC1-203ENST00000588802 RAPGEF4Q8WZA2 1011 aa13.88□□□□□ -0.19
APOC1-203ENST00000588802 EMILIN1Q9Y6C2 1016 aa13.88□□□□□ -0.19
APOC1-203ENST00000588802 MEGF6O75095 1541 aa13.88□□□□□ -0.19
APOC1-203ENST00000588802 NSD3Q9BZ95 1437 aa13.88□□□□□ -0.19
APOC1-203ENST00000588802 CGNL1Q0VF96 1302 aa13.88□□□□□ -0.19
APOC1-203ENST00000588802 KIF24Q5T7B8 1368 aa13.87□□□□□ -0.19
APOC1-203ENST00000588802 RGPD2P0DJD1 1756 aa13.87□□□□□ -0.19
APOC1-203ENST00000588802 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
APOC1-203ENST00000588802 TATP17735 454 aaPredicted RBP13.87□□□□□ -0.19
APOC1-203ENST00000588802 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
APOC1-203ENST00000588802 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
APOC1-203ENST00000588802 PTGER2P43116 358 aa13.86□□□□□ -0.19
APOC1-203ENST00000588802 TNNT2P45379 298 aaPredicted RBP13.86□□□□□ -0.19
APOC1-203ENST00000588802 CC2D1BQ5T0F9 858 aaKnown RBP13.86□□□□□ -0.19
APOC1-203ENST00000588802 SMG6Q86US8 1419 aaKnown RBP13.86□□□□□ -0.19
APOC1-203ENST00000588802 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
APOC1-203ENST00000588802 CASZ1Q86V15 1759 aa13.86□□□□□ -0.19
APOC1-203ENST00000588802 BTAF1O14981 1849 aa13.85□□□□□ -0.19
APOC1-203ENST00000588802 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
APOC1-203ENST00000588802 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
APOC1-203ENST00000588802 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
APOC1-203ENST00000588802 YY1P25490 414 aa13.84□□□□□ -0.19
APOC1-203ENST00000588802 RALBP1Q15311 655 aa13.84□□□□□ -0.19
APOC1-203ENST00000588802 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
APOC1-203ENST00000588802 MTFR1LQ9H019 292 aa13.84□□□□□ -0.19
APOC1-203ENST00000588802 KNSTRNQ9Y448 316 aa13.84□□□□□ -0.19
APOC1-203ENST00000588802 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
APOC1-203ENST00000588802 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
APOC1-203ENST00000588802 INSRP06213 1382 aa13.83□□□□□ -0.19
APOC1-203ENST00000588802 FLT4P35916 1363 aa13.83□□□□□ -0.19
APOC1-203ENST00000588802 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
APOC1-203ENST00000588802 TFCP2L1Q9NZI6 479 aa13.83□□□□□ -0.2
APOC1-203ENST00000588802 MSH5O43196 834 aa13.82□□□□□ -0.2
APOC1-203ENST00000588802 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
APOC1-203ENST00000588802 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
APOC1-203ENST00000588802 NSD2O96028 1365 aa13.82□□□□□ -0.2
APOC1-203ENST00000588802 NPC1L1Q9UHC9 1359 aa13.82□□□□□ -0.2
APOC1-203ENST00000588802 MPRIPQ6WCQ1 1025 aa13.81□□□□□ -0.2
APOC1-203ENST00000588802 SLC16A10Q8TF71 515 aa13.81□□□□□ -0.2
APOC1-203ENST00000588802 ARXQ96QS3 562 aa13.81□□□□□ -0.2
APOC1-203ENST00000588802 SYT17Q9BSW7 474 aa13.81□□□□□ -0.2
APOC1-203ENST00000588802 DOT1LQ8TEK3 1739 aa13.81□□□□□ -0.2
APOC1-203ENST00000588802 SGIP1Q9BQI5 828 aa13.8□□□□□ -0.2
APOC1-203ENST00000588802 CYP27B1O15528 508 aa13.79□□□□□ -0.2
APOC1-203ENST00000588802 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
APOC1-203ENST00000588802 PNPLA7Q6ZV29 1317 aa13.79□□□□□ -0.2
APOC1-203ENST00000588802 PCDH11XQ9BZA7 1347 aa13.79□□□□□ -0.2
APOC1-203ENST00000588802 PCDH11YQ9BZA8 1340 aa13.79□□□□□ -0.2
APOC1-203ENST00000588802 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
APOC1-203ENST00000588802 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
APOC1-203ENST00000588802 EYA1Q99502 592 aa13.78□□□□□ -0.2
APOC1-203ENST00000588802 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
APOC1-203ENST00000588802 MAP3K5Q99683 1374 aa13.77□□□□□ -0.21
APOC1-203ENST00000588802 POLD1P28340 1107 aa13.76□□□□□ -0.21
APOC1-203ENST00000588802 MSL1Q68DK7 614 aa13.76□□□□□ -0.21
APOC1-203ENST00000588802 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
APOC1-203ENST00000588802 EIF4A2Q14240 407 aaKnown RBP13.75□□□□□ -0.21
APOC1-203ENST00000588802 SMIM5Q71RC9 77 aa13.75□□□□□ -0.21
APOC1-203ENST00000588802 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
APOC1-203ENST00000588802 SPG7Q9UQ90 795 aa13.75□□□□□ -0.21
APOC1-203ENST00000588802 PALLDQ8WX93 1383 aa13.74□□□□□ -0.21
APOC1-203ENST00000588802 PLEKHG2Q9H7P9 1386 aa13.74□□□□□ -0.21
APOC1-203ENST00000588802 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
APOC1-203ENST00000588802 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
APOC1-203ENST00000588802 GPR162Q16538 588 aa13.73□□□□□ -0.21
APOC1-203ENST00000588802 PIGBQ92521 554 aa13.73□□□□□ -0.21
APOC1-203ENST00000588802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.21
APOC1-203ENST00000588802 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
APOC1-203ENST00000588802 NCAPD2Q15021 1401 aa13.72□□□□□ -0.21
APOC1-203ENST00000588802 MAP2P11137 1827 aaKnown RBP13.71□□□□□ -0.21
APOC1-203ENST00000588802 LY75O60449 1722 aa13.71□□□□□ -0.21
APOC1-203ENST00000588802 PHF14O94880 888 aa13.71□□□□□ -0.21
APOC1-203ENST00000588802 NLGN2Q8NFZ4 835 aa13.71□□□□□ -0.21
APOC1-203ENST00000588802 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.21
APOC1-203ENST00000588802 SMARCC1Q92922 1105 aaPredicted RBP13.71□□□□□ -0.21
APOC1-203ENST00000588802 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
APOC1-203ENST00000588802 PHKG2P15735 406 aa13.7□□□□□ -0.22
APOC1-203ENST00000588802 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
APOC1-203ENST00000588802 IFNL2Q8IZJ0 200 aa13.7□□□□□ -0.22
APOC1-203ENST00000588802 FLAD1Q8NFF5 587 aa13.7□□□□□ -0.22
APOC1-203ENST00000588802 AK7Q96M32 723 aa13.7□□□□□ -0.22
APOC1-203ENST00000588802 ASAP1Q9ULH1 1129 aa13.7□□□□□ -0.22
APOC1-203ENST00000588802 AMIGO3Q86WK7 504 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms