RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 FAM208AQ9UK61 1670 aaKnown RBP26.66■■□□□ 1.86
ATG4D-204ENST00000586417 NWD2Q9ULI1 1742 aa26.66■■□□□ 1.86
ATG4D-204ENST00000586417 KDRP35968 1356 aa26.64■■□□□ 1.86
ATG4D-204ENST00000586417 TOM1L2Q6ZVM7 507 aa26.64■■□□□ 1.86
ATG4D-204ENST00000586417 NEFMP07197 916 aa26.63■■□□□ 1.85
ATG4D-204ENST00000586417 NFE2L2Q16236 605 aa26.63■■□□□ 1.85
ATG4D-204ENST00000586417 BCL9LQ86UU0 1499 aa26.63■■□□□ 1.85
ATG4D-204ENST00000586417 FNBP4Q8N3X1 1017 aaPredicted RBP26.63■■□□□ 1.85
ATG4D-204ENST00000586417 NCAPD2Q15021 1401 aa26.62■■□□□ 1.85
ATG4D-204ENST00000586417 IL16Q14005 1332 aa26.61■■□□□ 1.85
ATG4D-204ENST00000586417 PPP4R2Q9NY27 417 aa26.61■■□□□ 1.85
ATG4D-204ENST00000586417 CRB1P82279 1406 aa26.6■■□□□ 1.85
ATG4D-204ENST00000586417 USP35Q9P2H5 1018 aa26.6■■□□□ 1.85
ATG4D-204ENST00000586417 UNC5CLQ8IV45 518 aa26.59■■□□□ 1.85
ATG4D-204ENST00000586417 CARD10Q9BWT7 1032 aa26.58■■□□□ 1.85
ATG4D-204ENST00000586417 MYH16Q9H6N6 1097 aa26.58■■□□□ 1.85
ATG4D-204ENST00000586417 DLG5Q8TDM6 1919 aa26.58■■□□□ 1.85
ATG4D-204ENST00000586417 USP21Q9UK80 565 aa26.58■■□□□ 1.85
ATG4D-204ENST00000586417 AFF2P51816 1311 aa26.58■■□□□ 1.85
ATG4D-204ENST00000586417 PLIN1O60240 522 aa26.56■■□□□ 1.84
ATG4D-204ENST00000586417 ILDR1Q86SU0 546 aaPredicted RBP26.56■■□□□ 1.84
ATG4D-204ENST00000586417 FANCIQ9NVI1 1328 aa26.54■■□□□ 1.84
ATG4D-204ENST00000586417 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.54■■□□□ 1.84
ATG4D-204ENST00000586417 MEGF6O75095 1541 aa26.53■■□□□ 1.84
ATG4D-204ENST00000586417 CCDC9Q9Y3X0 531 aaKnown RBP26.52■■□□□ 1.84
ATG4D-204ENST00000586417 SPATA31A1Q5TZJ5 1347 aa26.51■■□□□ 1.84
ATG4D-204ENST00000586417 SPATA31A5Q5VU36 1347 aa26.51■■□□□ 1.84
ATG4D-204ENST00000586417 SPATA31A7Q8IWB4 1347 aa26.51■■□□□ 1.84
ATG4D-204ENST00000586417 TSR2Q969E8 191 aaKnown RBP26.51■■□□□ 1.83
ATG4D-204ENST00000586417 VPS72Q15906 364 aa26.5■■□□□ 1.83
ATG4D-204ENST00000586417 RAPGEF4Q8WZA2 1011 aa26.5■■□□□ 1.83
ATG4D-204ENST00000586417 LMOD3Q0VAK6 560 aa26.49■■□□□ 1.83
ATG4D-204ENST00000586417 BCAR3O75815 825 aa26.48■■□□□ 1.83
ATG4D-204ENST00000586417 MTHFSDQ2M296 383 aaKnown RBP26.48■■□□□ 1.83
ATG4D-204ENST00000586417 THUMPD2Q9BTF0 503 aaKnown RBP26.48■■□□□ 1.83
ATG4D-204ENST00000586417 EXOC6Q8TAG9 804 aa26.47■■□□□ 1.83
ATG4D-204ENST00000586417 IL2RBP14784 551 aa26.46■■□□□ 1.83
ATG4D-204ENST00000586417 TATP17735 454 aaPredicted RBP26.46■■□□□ 1.83
ATG4D-204ENST00000586417 RARSP54136 660 aaKnown RBP26.46■■□□□ 1.83
ATG4D-204ENST00000586417 CALD1Q05682 793 aaKnown RBP26.46■■□□□ 1.83
ATG4D-204ENST00000586417 C20orf194Q5TEA3 1177 aa26.46■■□□□ 1.83
ATG4D-204ENST00000586417 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
ATG4D-204ENST00000586417 WNK3Q9BYP7 1800 aa26.45■■□□□ 1.83
ATG4D-204ENST00000586417 PARP4Q9UKK3 1724 aaKnown RBP26.45■■□□□ 1.82
ATG4D-204ENST00000586417 CT47B1P0C2W7 299 aaPredicted RBP26.44■■□□□ 1.82
ATG4D-204ENST00000586417 EXOSC9Q06265 439 aaKnown RBP26.44■■□□□ 1.82
ATG4D-204ENST00000586417 B4GALNT3Q6L9W6 998 aa26.44■■□□□ 1.82
ATG4D-204ENST00000586417 OVOS2A0A0G2JMS6 1433 aa26.44■■□□□ 1.82
ATG4D-204ENST00000586417 DISP2A7MBM2 1401 aa26.44■■□□□ 1.82
ATG4D-204ENST00000586417 ATRNO75882 1429 aa26.44■■□□□ 1.82
ATG4D-204ENST00000586417 ZNF853P0CG23 659 aa26.43■■□□□ 1.82
ATG4D-204ENST00000586417 QTRT2Q9H974 415 aaKnown RBP26.43■■□□□ 1.82
ATG4D-204ENST00000586417 IFT57Q9NWB7 429 aa26.43■■□□□ 1.82
ATG4D-204ENST00000586417 PLEKHO1Q53GL0 409 aaPredicted RBP26.42■■□□□ 1.82
ATG4D-204ENST00000586417 TRPC5Q9UL62 973 aaPredicted RBP26.42■■□□□ 1.82
ATG4D-204ENST00000586417 THRAP3Q9Y2W1 955 aaKnown RBP26.42■■□□□ 1.82
ATG4D-204ENST00000586417 GLI3P10071 1580 aa26.42■■□□□ 1.82
ATG4D-204ENST00000586417 PKD1L3Q7Z443 1732 aa26.41■■□□□ 1.82
ATG4D-204ENST00000586417 GJD4Q96KN9 370 aaPredicted RBP26.41■■□□□ 1.82
ATG4D-204ENST00000586417 CRBNQ96SW2 442 aa26.41■■□□□ 1.82
ATG4D-204ENST00000586417 FAM98CQ17RN3 349 aaKnown RBP26.41■■□□□ 1.82
ATG4D-204ENST00000586417 DCTN1Q14203 1278 aa26.4■■□□□ 1.82
ATG4D-204ENST00000586417 AMOTQ4VCS5 1084 aa26.4■■□□□ 1.82
ATG4D-204ENST00000586417 GNAI1P63096 354 aa26.39■■□□□ 1.82
ATG4D-204ENST00000586417 ZNF530Q6P9A1 599 aaPredicted RBP26.39■■□□□ 1.82
ATG4D-204ENST00000586417 BARGINQ6ZT62 677 aa26.39■■□□□ 1.82
ATG4D-204ENST00000586417 GAS2L2Q8NHY3 880 aa26.39■■□□□ 1.82
ATG4D-204ENST00000586417 SHANK3Q9BYB0 1731 aa26.39■■□□□ 1.81
ATG4D-204ENST00000586417 RGS17Q9UGC6 210 aaPredicted RBP26.38■■□□□ 1.81
ATG4D-204ENST00000586417 ZCRB1Q8TBF4 217 aaKnown RBP26.38■■□□□ 1.81
ATG4D-204ENST00000586417 CFAP44Q96MT7 982 aa26.38■■□□□ 1.81
ATG4D-204ENST00000586417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.38■■□□□ 1.81
ATG4D-204ENST00000586417 SPG7Q9UQ90 795 aa26.37■■□□□ 1.81
ATG4D-204ENST00000586417 LAS1LQ9Y4W2 734 aaKnown RBP26.36■■□□□ 1.81
ATG4D-204ENST00000586417 CYP27B1O15528 508 aa26.35■■□□□ 1.81
ATG4D-204ENST00000586417 ZNF772Q68DY9 489 aaPredicted RBP26.35■■□□□ 1.81
ATG4D-204ENST00000586417 MBIPQ9NS73 344 aa26.35■■□□□ 1.81
ATG4D-204ENST00000586417 MCM10Q7L590 875 aa26.35■■□□□ 1.81
ATG4D-204ENST00000586417 PELP1Q8IZL8 1130 aaKnown RBP26.35■■□□□ 1.81
ATG4D-204ENST00000586417 PLEKHG2Q9H7P9 1386 aa26.34■■□□□ 1.81
ATG4D-204ENST00000586417 CCDC136Q96JN2 1154 aa26.34■■□□□ 1.81
ATG4D-204ENST00000586417 LRRC37A3O60309 1634 aa26.33■■□□□ 1.81
ATG4D-204ENST00000586417 MAP3K5Q99683 1374 aa26.33■■□□□ 1.81
ATG4D-204ENST00000586417 GNAT3A8MTJ3 354 aa26.33■■□□□ 1.8
ATG4D-204ENST00000586417 DDX54Q8TDD1 881 aaKnown RBP26.33■■□□□ 1.8
ATG4D-204ENST00000586417 CDCA7Q9BWT1 371 aaPredicted RBP26.33■■□□□ 1.8
ATG4D-204ENST00000586417 BCL2L13Q9BXK5 485 aa26.33■■□□□ 1.8
ATG4D-204ENST00000586417 PHKG2P15735 406 aa26.32■■□□□ 1.8
ATG4D-204ENST00000586417 AKAP4Q5JQC9 854 aa26.32■■□□□ 1.8
ATG4D-204ENST00000586417 EXOC5O00471 708 aa26.31■■□□□ 1.8
ATG4D-204ENST00000586417 PDE3AQ14432 1141 aa26.31■■□□□ 1.8
ATG4D-204ENST00000586417 C1orf141Q5JVX7 400 aa26.31■■□□□ 1.8
ATG4D-204ENST00000586417 VIRMAQ69YN4 1812 aaKnown RBP26.31■■□□□ 1.8
ATG4D-204ENST00000586417 THSD7AQ9UPZ6 1657 aa26.31■■□□□ 1.8
ATG4D-204ENST00000586417 MPRIPQ6WCQ1 1025 aa26.3■■□□□ 1.8
ATG4D-204ENST00000586417 PCDH11XQ9BZA7 1347 aa26.3■■□□□ 1.8
ATG4D-204ENST00000586417 PCDH11YQ9BZA8 1340 aa26.3■■□□□ 1.8
ATG4D-204ENST00000586417 HTATSF1O43719 755 aaKnown RBP26.3■■□□□ 1.8
ATG4D-204ENST00000586417 DDB1Q16531 1140 aa26.3■■□□□ 1.8
ATG4D-204ENST00000586417 IFNL2Q8IZJ0 200 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms