RNA–Protein interactions for RNA: ENST00000586248.5

LINC00662-202, long intergenic non-protein coding RNA 662, humanhuman

TSL 3

Gene LINC00662, Length 669 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-202ENST00000586248 IP6K1Q92551 441 aa16.94■□□□□ 0.3
LINC00662-202ENST00000586248 SMG6Q86US8 1419 aaKnown RBP16.93■□□□□ 0.3
LINC00662-202ENST00000586248 AMPHP49418 695 aa16.92■□□□□ 0.3
LINC00662-202ENST00000586248 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
LINC00662-202ENST00000586248 SPON1Q9HCB6 807 aa16.91■□□□□ 0.3
LINC00662-202ENST00000586248 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
LINC00662-202ENST00000586248 HOXC9P31274 260 aa16.89■□□□□ 0.29
LINC00662-202ENST00000586248 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
LINC00662-202ENST00000586248 LTV1Q96GA3 475 aaPredicted RBP16.89■□□□□ 0.29
LINC00662-202ENST00000586248 ANO8Q9HCE9 1232 aaPredicted RBP16.89■□□□□ 0.29
LINC00662-202ENST00000586248 STK32BQ9NY57 414 aa16.89■□□□□ 0.29
LINC00662-202ENST00000586248 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
LINC00662-202ENST00000586248 KCNQ2O43526 872 aa16.88■□□□□ 0.29
LINC00662-202ENST00000586248 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
LINC00662-202ENST00000586248 CASZ1Q86V15 1759 aa16.87■□□□□ 0.29
LINC00662-202ENST00000586248 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
LINC00662-202ENST00000586248 MYOM1P52179 1685 aa16.87■□□□□ 0.29
LINC00662-202ENST00000586248 GGNBP2Q9H3C7 697 aa16.86■□□□□ 0.29
LINC00662-202ENST00000586248 KIF24Q5T7B8 1368 aa16.86■□□□□ 0.29
LINC00662-202ENST00000586248 BTAF1O14981 1849 aa16.85■□□□□ 0.29
LINC00662-202ENST00000586248 PITPNM1O00562 1244 aa16.85■□□□□ 0.29
LINC00662-202ENST00000586248 FYB1O15117 783 aa16.85■□□□□ 0.29
LINC00662-202ENST00000586248 CHRDL2Q6WN34 429 aa16.85■□□□□ 0.29
LINC00662-202ENST00000586248 FLT4P35916 1363 aa16.85■□□□□ 0.29
LINC00662-202ENST00000586248 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
LINC00662-202ENST00000586248 SPDYE1Q8NFV5 336 aaPredicted RBP16.84■□□□□ 0.29
LINC00662-202ENST00000586248 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
LINC00662-202ENST00000586248 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
LINC00662-202ENST00000586248 MEGF6O75095 1541 aa16.83■□□□□ 0.28
LINC00662-202ENST00000586248 PAPPAQ13219 1627 aa16.83■□□□□ 0.28
LINC00662-202ENST00000586248 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.28
LINC00662-202ENST00000586248 SLC15A2Q16348 729 aa16.83■□□□□ 0.28
LINC00662-202ENST00000586248 PROM2Q8N271 834 aa16.83■□□□□ 0.28
LINC00662-202ENST00000586248 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.28
LINC00662-202ENST00000586248 INSRP06213 1382 aa16.82■□□□□ 0.28
LINC00662-202ENST00000586248 RAPGEF4Q8WZA2 1011 aa16.81■□□□□ 0.28
LINC00662-202ENST00000586248 DOT1LQ8TEK3 1739 aa16.81■□□□□ 0.28
LINC00662-202ENST00000586248 FBLN1P23142 703 aa16.8■□□□□ 0.28
LINC00662-202ENST00000586248 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
LINC00662-202ENST00000586248 SLC27A3Q5K4L6 730 aa16.79■□□□□ 0.28
LINC00662-202ENST00000586248 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
LINC00662-202ENST00000586248 SHANK3Q9BYB0 1731 aa16.79■□□□□ 0.28
LINC00662-202ENST00000586248 ZBTB7AO95365 584 aa16.78■□□□□ 0.28
LINC00662-202ENST00000586248 TATP17735 454 aaPredicted RBP16.78■□□□□ 0.28
LINC00662-202ENST00000586248 SYTL4Q96C24 671 aaPredicted RBP16.78■□□□□ 0.28
LINC00662-202ENST00000586248 MTFR1LQ9H019 292 aa16.78■□□□□ 0.28
LINC00662-202ENST00000586248 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.28
LINC00662-202ENST00000586248 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
LINC00662-202ENST00000586248 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
LINC00662-202ENST00000586248 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
LINC00662-202ENST00000586248 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
LINC00662-202ENST00000586248 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
LINC00662-202ENST00000586248 FKBP8Q14318 412 aa16.76■□□□□ 0.27
LINC00662-202ENST00000586248 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00662-202ENST00000586248 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
LINC00662-202ENST00000586248 USHBP1Q8N6Y0 703 aa16.75■□□□□ 0.27
LINC00662-202ENST00000586248 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
LINC00662-202ENST00000586248 CCER1Q8TC90 406 aaPredicted RBP16.74■□□□□ 0.27
LINC00662-202ENST00000586248 POLR3GLQ9BT43 218 aa16.74■□□□□ 0.27
LINC00662-202ENST00000586248 PDGFDQ9GZP0 370 aaPredicted RBP16.74■□□□□ 0.27
LINC00662-202ENST00000586248 NSD2O96028 1365 aa16.74■□□□□ 0.27
LINC00662-202ENST00000586248 QSER1Q2KHR3 1735 aa16.73■□□□□ 0.27
LINC00662-202ENST00000586248 PTGER2P43116 358 aa16.73■□□□□ 0.27
LINC00662-202ENST00000586248 PRIM1P49642 420 aaKnown RBP16.73■□□□□ 0.27
LINC00662-202ENST00000586248 EMILIN1Q9Y6C2 1016 aa16.73■□□□□ 0.27
LINC00662-202ENST00000586248 NCAPD2Q15021 1401 aa16.72■□□□□ 0.27
LINC00662-202ENST00000586248 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
LINC00662-202ENST00000586248 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
LINC00662-202ENST00000586248 LRRC4BQ9NT99 713 aa16.72■□□□□ 0.27
LINC00662-202ENST00000586248 LY75O60449 1722 aa16.72■□□□□ 0.27
LINC00662-202ENST00000586248 PKD1L3Q7Z443 1732 aa16.71■□□□□ 0.27
LINC00662-202ENST00000586248 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
LINC00662-202ENST00000586248 SLC16A10Q8TF71 515 aa16.7■□□□□ 0.26
LINC00662-202ENST00000586248 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
LINC00662-202ENST00000586248 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
LINC00662-202ENST00000586248 PLEKHG2Q9H7P9 1386 aa16.69■□□□□ 0.26
LINC00662-202ENST00000586248 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
LINC00662-202ENST00000586248 MAP3K5Q99683 1374 aa16.68■□□□□ 0.26
LINC00662-202ENST00000586248 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
LINC00662-202ENST00000586248 YY1P25490 414 aa16.68■□□□□ 0.26
LINC00662-202ENST00000586248 TFCP2L1Q9NZI6 479 aa16.68■□□□□ 0.26
LINC00662-202ENST00000586248 POLD1P28340 1107 aa16.67■□□□□ 0.26
LINC00662-202ENST00000586248 ARXQ96QS3 562 aa16.67■□□□□ 0.26
LINC00662-202ENST00000586248 SGIP1Q9BQI5 828 aa16.67■□□□□ 0.26
LINC00662-202ENST00000586248 FHDC1Q9C0D6 1143 aaPredicted RBP16.67■□□□□ 0.26
LINC00662-202ENST00000586248 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
LINC00662-202ENST00000586248 PNPLA7Q6ZV29 1317 aa16.67■□□□□ 0.26
LINC00662-202ENST00000586248 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
LINC00662-202ENST00000586248 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
LINC00662-202ENST00000586248 TUBGCP6Q96RT7 1819 aa16.65■□□□□ 0.26
LINC00662-202ENST00000586248 CYP27B1O15528 508 aa16.64■□□□□ 0.25
LINC00662-202ENST00000586248 SMARCC1Q92922 1105 aaPredicted RBP16.64■□□□□ 0.25
LINC00662-202ENST00000586248 SYT17Q9BSW7 474 aa16.64■□□□□ 0.25
LINC00662-202ENST00000586248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC00662-202ENST00000586248 POLKQ9UBT6 870 aa16.64■□□□□ 0.25
LINC00662-202ENST00000586248 C5P01031 1676 aa16.64■□□□□ 0.25
LINC00662-202ENST00000586248 TOGARAM1Q9Y4F4 1720 aa16.64■□□□□ 0.25
LINC00662-202ENST00000586248 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
LINC00662-202ENST00000586248 KCNQ4P56696 695 aa16.62■□□□□ 0.25
LINC00662-202ENST00000586248 MPRIPQ6WCQ1 1025 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms