RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 BTAF1O14981 1849 aa18.58■□□□□ 0.57
PRKCSH-201ENST00000585325 SGIP1Q9BQI5 828 aa18.58■□□□□ 0.56
PRKCSH-201ENST00000585325 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.56
PRKCSH-201ENST00000585325 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.56
PRKCSH-201ENST00000585325 MTFR1LQ9H019 292 aa18.58■□□□□ 0.56
PRKCSH-201ENST00000585325 CHD4Q14839 1912 aa18.58■□□□□ 0.56
PRKCSH-201ENST00000585325 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
PRKCSH-201ENST00000585325 UTRNP46939 3433 aa18.55■□□□□ 0.56
PRKCSH-201ENST00000585325 MEGF6O75095 1541 aa18.55■□□□□ 0.56
PRKCSH-201ENST00000585325 USHBP1Q8N6Y0 703 aa18.55■□□□□ 0.56
PRKCSH-201ENST00000585325 FLT4P35916 1363 aa18.55■□□□□ 0.56
PRKCSH-201ENST00000585325 HSP90AB2PQ58FF8 381 aa18.54■□□□□ 0.56
PRKCSH-201ENST00000585325 NBPF6Q5VWK0 638 aa18.54■□□□□ 0.56
PRKCSH-201ENST00000585325 NBPF4Q96M43 638 aa18.54■□□□□ 0.56
PRKCSH-201ENST00000585325 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
PRKCSH-201ENST00000585325 INSRP06213 1382 aa18.54■□□□□ 0.56
PRKCSH-201ENST00000585325 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
PRKCSH-201ENST00000585325 ZCRB1Q8TBF4 217 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-201ENST00000585325 DOT1LQ8TEK3 1739 aa18.53■□□□□ 0.56
PRKCSH-201ENST00000585325 ARXQ96QS3 562 aa18.53■□□□□ 0.56
PRKCSH-201ENST00000585325 RAPGEF4Q8WZA2 1011 aa18.52■□□□□ 0.56
PRKCSH-201ENST00000585325 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
PRKCSH-201ENST00000585325 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.55
PRKCSH-201ENST00000585325 MAP3K5Q99683 1374 aa18.52■□□□□ 0.55
PRKCSH-201ENST00000585325 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
PRKCSH-201ENST00000585325 EMILIN1Q9Y6C2 1016 aa18.51■□□□□ 0.55
PRKCSH-201ENST00000585325 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
PRKCSH-201ENST00000585325 PAPPAQ13219 1627 aa18.5■□□□□ 0.55
PRKCSH-201ENST00000585325 PPM1GO15355 546 aaPredicted RBP18.5■□□□□ 0.55
PRKCSH-201ENST00000585325 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
PRKCSH-201ENST00000585325 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
PRKCSH-201ENST00000585325 GPR162Q16538 588 aa18.49■□□□□ 0.55
PRKCSH-201ENST00000585325 PRIM1P49642 420 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-201ENST00000585325 ANKRD26Q9UPS8 1709 aa18.47■□□□□ 0.55
PRKCSH-201ENST00000585325 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
PRKCSH-201ENST00000585325 LRRC4BQ9NT99 713 aa18.46■□□□□ 0.55
PRKCSH-201ENST00000585325 NSD2O96028 1365 aa18.45■□□□□ 0.54
PRKCSH-201ENST00000585325 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
PRKCSH-201ENST00000585325 PCDH11XQ9BZA7 1347 aa18.45■□□□□ 0.54
PRKCSH-201ENST00000585325 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
PRKCSH-201ENST00000585325 ZNF827Q17R98 1081 aa18.44■□□□□ 0.54
PRKCSH-201ENST00000585325 TNNT2P45379 298 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-201ENST00000585325 KLHL34Q8N239 644 aa18.43■□□□□ 0.54
PRKCSH-201ENST00000585325 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
PRKCSH-201ENST00000585325 LY75O60449 1722 aa18.43■□□□□ 0.54
PRKCSH-201ENST00000585325 KCNQ4P56696 695 aa18.42■□□□□ 0.54
PRKCSH-201ENST00000585325 PELP1Q8IZL8 1130 aaKnown RBP18.42■□□□□ 0.54
PRKCSH-201ENST00000585325 PANK3Q9H999 370 aa18.42■□□□□ 0.54
PRKCSH-201ENST00000585325 AKT1S1Q96B36 256 aa18.41■□□□□ 0.54
PRKCSH-201ENST00000585325 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
PRKCSH-201ENST00000585325 PKD1L3Q7Z443 1732 aa18.4■□□□□ 0.54
PRKCSH-201ENST00000585325 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
PRKCSH-201ENST00000585325 CYP27B1O15528 508 aa18.39■□□□□ 0.53
PRKCSH-201ENST00000585325 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
PRKCSH-201ENST00000585325 QSER1Q2KHR3 1735 aa18.39■□□□□ 0.53
PRKCSH-201ENST00000585325 EYA1Q99502 592 aa18.38■□□□□ 0.53
PRKCSH-201ENST00000585325 TFCP2L1Q9NZI6 479 aa18.38■□□□□ 0.53
PRKCSH-201ENST00000585325 TUBGCP6Q96RT7 1819 aa18.37■□□□□ 0.53
PRKCSH-201ENST00000585325 POLD1P28340 1107 aa18.37■□□□□ 0.53
PRKCSH-201ENST00000585325 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
PRKCSH-201ENST00000585325 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
PRKCSH-201ENST00000585325 MPRIPQ6WCQ1 1025 aa18.36■□□□□ 0.53
PRKCSH-201ENST00000585325 PNPLA7Q6ZV29 1317 aa18.36■□□□□ 0.53
PRKCSH-201ENST00000585325 SLC16A10Q8TF71 515 aa18.36■□□□□ 0.53
PRKCSH-201ENST00000585325 ITGB4P16144 1822 aa18.35■□□□□ 0.53
PRKCSH-201ENST00000585325 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-201ENST00000585325 NLGN2Q8NFZ4 835 aa18.35■□□□□ 0.53
PRKCSH-201ENST00000585325 MORC1Q86VD1 984 aa18.34■□□□□ 0.53
PRKCSH-201ENST00000585325 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
PRKCSH-201ENST00000585325 C5P01031 1676 aa18.33■□□□□ 0.52
PRKCSH-201ENST00000585325 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
PRKCSH-201ENST00000585325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
PRKCSH-201ENST00000585325 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
PRKCSH-201ENST00000585325 MSH5O43196 834 aa18.31■□□□□ 0.52
PRKCSH-201ENST00000585325 YBX3P16989 372 aaKnown RBP eCLIP18.31■□□□□ 0.52
PRKCSH-201ENST00000585325 NKX1-1Q15270 411 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-201ENST00000585325 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
PRKCSH-201ENST00000585325 SMARCC1Q92922 1105 aaPredicted RBP18.3■□□□□ 0.52
PRKCSH-201ENST00000585325 KIF7Q2M1P5 1343 aa18.29■□□□□ 0.52
PRKCSH-201ENST00000585325 IGSF1Q8N6C5 1336 aa18.29■□□□□ 0.52
PRKCSH-201ENST00000585325 TAF1LQ8IZX4 1826 aa18.29■□□□□ 0.52
PRKCSH-201ENST00000585325 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
PRKCSH-201ENST00000585325 PHKG2P15735 406 aa18.29■□□□□ 0.52
PRKCSH-201ENST00000585325 PIGBQ92521 554 aa18.29■□□□□ 0.52
PRKCSH-201ENST00000585325 ATP10DQ9P241 1426 aa18.29■□□□□ 0.52
PRKCSH-201ENST00000585325 HMGB2P26583 209 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-201ENST00000585325 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
PRKCSH-201ENST00000585325 CEP350Q5VT06 3117 aa18.27■□□□□ 0.52
PRKCSH-201ENST00000585325 COL23A1Q86Y22 540 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-201ENST00000585325 PLEKHG2Q9H7P9 1386 aa18.26■□□□□ 0.51
PRKCSH-201ENST00000585325 C4BP0C0L5 1744 aa18.26■□□□□ 0.51
PRKCSH-201ENST00000585325 HSPA6P17066 643 aa18.24■□□□□ 0.51
PRKCSH-201ENST00000585325 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-201ENST00000585325 AMER1Q5JTC6 1135 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-201ENST00000585325 AK7Q96M32 723 aa18.24■□□□□ 0.51
PRKCSH-201ENST00000585325 GPBP1L1Q9HC44 474 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-201ENST00000585325 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-201ENST00000585325 MSL1Q68DK7 614 aa18.23■□□□□ 0.51
PRKCSH-201ENST00000585325 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
PRKCSH-201ENST00000585325 ASAP1Q9ULH1 1129 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms