RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 EXOC5O00471 708 aa21.6■■□□□ 1.05
CSNK1D-223ENST00000584472 ANP32CO43423 234 aa21.6■■□□□ 1.05
CSNK1D-223ENST00000584472 RALBP1Q15311 655 aa21.6■■□□□ 1.05
CSNK1D-223ENST00000584472 NBPF6Q5VWK0 638 aa21.6■■□□□ 1.05
CSNK1D-223ENST00000584472 NBPF4Q96M43 638 aa21.6■■□□□ 1.05
CSNK1D-223ENST00000584472 NCAPD2Q15021 1401 aa21.59■■□□□ 1.05
CSNK1D-223ENST00000584472 NUP188Q5SRE5 1749 aa21.59■■□□□ 1.05
CSNK1D-223ENST00000584472 MARCH10Q8NA82 808 aaPredicted RBP21.59■■□□□ 1.05
CSNK1D-223ENST00000584472 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-223ENST00000584472 MEGF6O75095 1541 aa21.55■■□□□ 1.04
CSNK1D-223ENST00000584472 PPP2R1AP30153 589 aa21.54■■□□□ 1.04
CSNK1D-223ENST00000584472 NBPF14Q5TI25 921 aa21.54■■□□□ 1.04
CSNK1D-223ENST00000584472 PSDA5PKW4 1024 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-223ENST00000584472 R3HDM1Q15032 1099 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-223ENST00000584472 USHBP1Q8N6Y0 703 aa21.53■■□□□ 1.04
CSNK1D-223ENST00000584472 RAPGEF4Q8WZA2 1011 aa21.53■■□□□ 1.04
CSNK1D-223ENST00000584472 MYBBP1AQ9BQG0 1328 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-223ENST00000584472 MTHFSP49914 203 aa21.52■■□□□ 1.04
CSNK1D-223ENST00000584472 EYA1Q99502 592 aa21.52■■□□□ 1.04
CSNK1D-223ENST00000584472 NHSQ6T4R5 1651 aa21.52■■□□□ 1.04
CSNK1D-223ENST00000584472 PLEKHG2Q9H7P9 1386 aa21.5■■□□□ 1.03
CSNK1D-223ENST00000584472 SHANK3Q9BYB0 1731 aa21.5■■□□□ 1.03
CSNK1D-223ENST00000584472 IGSF1Q8N6C5 1336 aa21.5■■□□□ 1.03
CSNK1D-223ENST00000584472 TATP17735 454 aaPredicted RBP21.49■■□□□ 1.03
CSNK1D-223ENST00000584472 PKD1L3Q7Z443 1732 aa21.49■■□□□ 1.03
CSNK1D-223ENST00000584472 ZCRB1Q8TBF4 217 aaKnown RBP21.48■■□□□ 1.03
CSNK1D-223ENST00000584472 COL3A1P02461 1466 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-223ENST00000584472 IL13P35225 146 aa21.46■■□□□ 1.03
CSNK1D-223ENST00000584472 MIER1Q8N108 512 aa21.44■■□□□ 1.02
CSNK1D-223ENST00000584472 KDRP35968 1356 aa21.44■■□□□ 1.02
CSNK1D-223ENST00000584472 PTF1AQ7RTS3 328 aa21.43■■□□□ 1.02
CSNK1D-223ENST00000584472 DDX54Q8TDD1 881 aaKnown RBP21.43■■□□□ 1.02
CSNK1D-223ENST00000584472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.43■■□□□ 1.02
CSNK1D-223ENST00000584472 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
CSNK1D-223ENST00000584472 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
CSNK1D-223ENST00000584472 DIAPH1O60610 1272 aaKnown RBP21.42■■□□□ 1.02
CSNK1D-223ENST00000584472 PROM2Q8N271 834 aa21.42■■□□□ 1.02
CSNK1D-223ENST00000584472 TXNRD1Q16881 649 aa21.41■■□□□ 1.02
CSNK1D-223ENST00000584472 CFAP53Q96M91 514 aa21.41■■□□□ 1.02
CSNK1D-223ENST00000584472 SPG7Q9UQ90 795 aa21.41■■□□□ 1.02
CSNK1D-223ENST00000584472 KCNQ2O43526 872 aa21.39■■□□□ 1.01
CSNK1D-223ENST00000584472 BTAF1O14981 1849 aa21.39■■□□□ 1.01
CSNK1D-223ENST00000584472 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
CSNK1D-223ENST00000584472 CCDC184Q52MB2 194 aa21.38■■□□□ 1.01
CSNK1D-223ENST00000584472 SULT6B1Q6IMI4 303 aa21.38■■□□□ 1.01
CSNK1D-223ENST00000584472 CASZ1Q86V15 1759 aa21.38■■□□□ 1.01
CSNK1D-223ENST00000584472 AEBP1Q8IUX7 1158 aa21.37■■□□□ 1.01
CSNK1D-223ENST00000584472 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
CSNK1D-223ENST00000584472 CYP27B1O15528 508 aa21.36■■□□□ 1.01
CSNK1D-223ENST00000584472 SPON1Q9HCB6 807 aa21.36■■□□□ 1.01
CSNK1D-223ENST00000584472 ANO8Q9HCE9 1232 aaPredicted RBP21.36■■□□□ 1.01
CSNK1D-223ENST00000584472 PAPPAQ13219 1627 aa21.36■■□□□ 1.01
CSNK1D-223ENST00000584472 KAT6BQ8WYB5 2073 aa21.35■■□□□ 1.01
CSNK1D-223ENST00000584472 AMOTQ4VCS5 1084 aa21.34■■□□□ 1.01
CSNK1D-223ENST00000584472 ACSBG1Q96GR2 724 aa21.34■■□□□ 1.01
CSNK1D-223ENST00000584472 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
CSNK1D-223ENST00000584472 NKX1-1Q15270 411 aaPredicted RBP21.33■■□□□ 1.01
CSNK1D-223ENST00000584472 SLC15A2Q16348 729 aa21.33■■□□□ 1.01
CSNK1D-223ENST00000584472 PLEKHO1Q53GL0 409 aaPredicted RBP21.33■■□□□ 1.01
CSNK1D-223ENST00000584472 SLC27A3Q5K4L6 730 aa21.33■■□□□ 1.01
CSNK1D-223ENST00000584472 STK32BQ9NY57 414 aa21.33■■□□□ 1.01
CSNK1D-223ENST00000584472 NUDCQ9Y266 331 aa21.32■■□□□ 1
CSNK1D-223ENST00000584472 TOGARAM1Q9Y4F4 1720 aa21.32■■□□□ 1
CSNK1D-223ENST00000584472 U2SURPO15042 1029 aaKnown RBP21.31■■□□□ 1
CSNK1D-223ENST00000584472 PHKG2P15735 406 aa21.31■■□□□ 1
CSNK1D-223ENST00000584472 IFNL2Q8IZJ0 200 aa21.31■■□□□ 1
CSNK1D-223ENST00000584472 HMOX1P09601 288 aa21.3■■□□□ 1
CSNK1D-223ENST00000584472 HMGB2P26583 209 aaKnown RBP21.3■■□□□ 1
CSNK1D-223ENST00000584472 PRIM1P49642 420 aaKnown RBP21.3■■□□□ 1
CSNK1D-223ENST00000584472 HSP90AB1P08238 724 aaKnown RBP21.28■■□□□ 1
CSNK1D-223ENST00000584472 ZNF530Q6P9A1 599 aaPredicted RBP21.28■■□□□ 1
CSNK1D-223ENST00000584472 LY75O60449 1722 aa21.28■■□□□ 1
CSNK1D-223ENST00000584472 QSER1Q2KHR3 1735 aa21.27■■□□□ 1
CSNK1D-223ENST00000584472 PNISRQ8TF01 805 aaKnown RBP21.27■■□□□ 1
CSNK1D-223ENST00000584472 SYTL4Q96C24 671 aaPredicted RBP21.27■■□□□ 1
CSNK1D-223ENST00000584472 ITGB4P16144 1822 aa21.27■□□□□ 0.99
CSNK1D-223ENST00000584472 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
CSNK1D-223ENST00000584472 DCAF5Q96JK2 942 aa21.25■□□□□ 0.99
CSNK1D-223ENST00000584472 U2AF1L5P0DN76 240 aaPredicted RBP21.24■□□□□ 0.99
CSNK1D-223ENST00000584472 U2AF1Q01081 240 aaKnown RBP eCLIP21.24■□□□□ 0.99
CSNK1D-223ENST00000584472 MTFR1LQ9H019 292 aa21.24■□□□□ 0.99
CSNK1D-223ENST00000584472 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
CSNK1D-223ENST00000584472 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
CSNK1D-223ENST00000584472 RSPH6AQ9H0K4 717 aa21.23■□□□□ 0.99
CSNK1D-223ENST00000584472 KDM6AO15550 1401 aaPredicted RBP21.22■□□□□ 0.99
CSNK1D-223ENST00000584472 FCHSD2O94868 740 aa21.22■□□□□ 0.99
CSNK1D-223ENST00000584472 AKT1S1Q96B36 256 aa21.22■□□□□ 0.99
CSNK1D-223ENST00000584472 PPP1R1BQ9UD71 204 aaPredicted RBP21.22■□□□□ 0.99
CSNK1D-223ENST00000584472 ERVV-2B6SEH9 535 aa21.21■□□□□ 0.99
CSNK1D-223ENST00000584472 PTGER2P43116 358 aa21.21■□□□□ 0.99
CSNK1D-223ENST00000584472 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
CSNK1D-223ENST00000584472 SLC16A10Q8TF71 515 aa21.21■□□□□ 0.99
CSNK1D-223ENST00000584472 SCN11AQ9UI33 1791 aa21.2■□□□□ 0.99
CSNK1D-223ENST00000584472 PRKAR2BP31323 418 aa21.2■□□□□ 0.98
CSNK1D-223ENST00000584472 MPRIPQ6WCQ1 1025 aa21.2■□□□□ 0.98
CSNK1D-223ENST00000584472 TMOD3Q9NYL9 352 aa21.2■□□□□ 0.98
CSNK1D-223ENST00000584472 ADAMTS8Q9UP79 889 aa21.2■□□□□ 0.98
CSNK1D-223ENST00000584472 ADAMTS7Q9UKP4 1686 aa21.19■□□□□ 0.98
CSNK1D-223ENST00000584472 MTHFSDQ2M296 383 aaKnown RBP21.19■□□□□ 0.98
CSNK1D-223ENST00000584472 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms