RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 GNAI3P08754 354 aa8.74□□□□□ -1.01
CMTM4-205ENST00000581487 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
CMTM4-205ENST00000581487 ZCRB1Q8TBF4 217 aaKnown RBP8.74□□□□□ -1.01
CMTM4-205ENST00000581487 HECW1Q76N89 1606 aa8.74□□□□□ -1.01
CMTM4-205ENST00000581487 ERC2O15083 957 aa8.74□□□□□ -1.01
CMTM4-205ENST00000581487 TMEM57Q8N5G2 664 aa8.74□□□□□ -1.01
CMTM4-205ENST00000581487 CCDC89Q8N998 374 aa8.74□□□□□ -1.01
CMTM4-205ENST00000581487 TTC16Q8NEE8 873 aa8.74□□□□□ -1.01
CMTM4-205ENST00000581487 UBTFL1P0CB47 393 aaPredicted RBP8.74□□□□□ -1.01
CMTM4-205ENST00000581487 CCDC102AQ96A19 550 aa8.74□□□□□ -1.01
CMTM4-205ENST00000581487 IGHDP01880 384 aa8.74□□□□□ -1.01
CMTM4-205ENST00000581487 MATR3P43243 847 aaKnown RBP eCLIP8.74□□□□□ -1.01
CMTM4-205ENST00000581487 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.74□□□□□ -1.01
CMTM4-205ENST00000581487 ARHGAP5Q13017 1502 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 NKTRP30414 1462 aaKnown RBP8.73□□□□□ -1.01
CMTM4-205ENST00000581487 CCP110O43303 1012 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 SSR1P43307 286 aaKnown RBP8.73□□□□□ -1.01
CMTM4-205ENST00000581487 TTC36A6NLP5 189 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 G3BP1Q13283 466 aaKnown RBP eCLIP8.73□□□□□ -1.01
CMTM4-205ENST00000581487 MPHOSPH10O00566 681 aaKnown RBP8.73□□□□□ -1.01
CMTM4-205ENST00000581487 SH3BP5O60239 455 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 CCDC27Q2M243 656 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 WDR78Q5VTH9 848 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 ERC1Q8IUD2 1116 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 RAB3IL1Q8TBN0 382 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 PPP1R1BQ9UD71 204 aaPredicted RBP8.73□□□□□ -1.01
CMTM4-205ENST00000581487 PTPN23Q9H3S7 1636 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 FERP16591 822 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 MNAT1P51948 309 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 CCDC73Q6ZRK6 1079 aa8.73□□□□□ -1.01
CMTM4-205ENST00000581487 DYNC1I1O14576 645 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 SMC2O95347 1197 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 FIBPO43427 364 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 DNAAF4Q8WXU2 420 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 SURF6O75683 361 aaKnown RBP8.72□□□□□ -1.01
CMTM4-205ENST00000581487 C1orf141Q5JVX7 400 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 DAAM2Q86T65 1068 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 SSH1Q8WYL5 1049 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 ZNF428Q96B54 188 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 DNMBPQ6XZF7 1577 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 C8orf34Q49A92 452 aa8.72□□□□□ -1.01
CMTM4-205ENST00000581487 NSD3Q9BZ95 1437 aa8.71□□□□□ -1.01
CMTM4-205ENST00000581487 GOLGA6L9A6NEM1 432 aa8.71□□□□□ -1.01
CMTM4-205ENST00000581487 FYB1O15117 783 aa8.71□□□□□ -1.01
CMTM4-205ENST00000581487 LRRCC1Q9C099 1032 aa8.71□□□□□ -1.01
CMTM4-205ENST00000581487 EPB41L2O43491 1005 aaKnown RBP8.71□□□□□ -1.01
CMTM4-205ENST00000581487 SLC4A2P04920 1241 aa8.71□□□□□ -1.01
CMTM4-205ENST00000581487 TMPOP42166 694 aaKnown RBP8.71□□□□□ -1.01
CMTM4-205ENST00000581487 VPS37DQ86XT2 251 aa8.71□□□□□ -1.01
CMTM4-205ENST00000581487 TNPO1Q92973 898 aaKnown RBP8.71□□□□□ -1.01
CMTM4-205ENST00000581487 PRAM1Q96QH2 718 aa8.71□□□□□ -1.01
CMTM4-205ENST00000581487 DISP3Q9P2K9 1392 aa8.71□□□□□ -1.01
CMTM4-205ENST00000581487 ERLIN1O75477 346 aa8.71□□□□□ -1.02
CMTM4-205ENST00000581487 TMCO3Q6UWJ1 677 aa8.71□□□□□ -1.02
CMTM4-205ENST00000581487 RPAP2Q8IXW5 612 aaPredicted RBP8.71□□□□□ -1.02
CMTM4-205ENST00000581487 TBC1D32Q96NH3 1257 aa8.71□□□□□ -1.02
CMTM4-205ENST00000581487 CNTROBQ8N137 903 aa8.71□□□□□ -1.02
CMTM4-205ENST00000581487 ZFYVE1Q9HBF4 777 aa8.71□□□□□ -1.02
CMTM4-205ENST00000581487 CABP1Q9NZU7 370 aa8.71□□□□□ -1.02
CMTM4-205ENST00000581487 MRVI1Q9Y6F6 885 aa8.71□□□□□ -1.02
CMTM4-205ENST00000581487 SMAP1Q8IYB5 467 aaPredicted RBP8.7□□□□□ -1.02
CMTM4-205ENST00000581487 FAM177A1Q8N128 213 aaPredicted RBP8.7□□□□□ -1.02
CMTM4-205ENST00000581487 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
CMTM4-205ENST00000581487 CAMSAP2Q08AD1 1489 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 CPLX1O14810 134 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 FCHSD2O94868 740 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 NAT10Q9H0A0 1025 aaKnown RBP8.7□□□□□ -1.02
CMTM4-205ENST00000581487 KIAA0586Q9BVV6 1533 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 GNAI2P04899 355 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 SUPT6HQ7KZ85 1726 aaKnown RBP8.7□□□□□ -1.02
CMTM4-205ENST00000581487 OPA1O60313 960 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 MYCNP04198 464 aaPredicted RBP8.7□□□□□ -1.02
CMTM4-205ENST00000581487 SSFA2P28290 1259 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 SLC26A8Q96RN1 970 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 PSMA5P28066 241 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 SARNPP82979 210 aaKnown RBP8.7□□□□□ -1.02
CMTM4-205ENST00000581487 SATB1Q01826 763 aa8.7□□□□□ -1.02
CMTM4-205ENST00000581487 CCDC30Q5VVM6 783 aa8.69□□□□□ -1.02
CMTM4-205ENST00000581487 DDX58O95786 925 aaKnown RBP8.69□□□□□ -1.02
CMTM4-205ENST00000581487 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
CMTM4-205ENST00000581487 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
CMTM4-205ENST00000581487 FOSBP53539 338 aa8.69□□□□□ -1.02
CMTM4-205ENST00000581487 RNF187Q5TA31 235 aaPredicted RBP8.69□□□□□ -1.02
CMTM4-205ENST00000581487 RBM33Q96EV2 1170 aaKnown RBP8.69□□□□□ -1.02
CMTM4-205ENST00000581487 FSD1Q9BTV5 496 aa8.69□□□□□ -1.02
CMTM4-205ENST00000581487 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.69□□□□□ -1.02
CMTM4-205ENST00000581487 V9GYY5 206 aaPredicted RBP8.69□□□□□ -1.02
CMTM4-205ENST00000581487 FAM107BQ9H098 131 aa8.69□□□□□ -1.02
CMTM4-205ENST00000581487 PARD3Q8TEW0 1356 aa8.69□□□□□ -1.02
CMTM4-205ENST00000581487 CCT4P50991 539 aaKnown RBP8.68□□□□□ -1.02
CMTM4-205ENST00000581487 TTC31Q49AM3 519 aaPredicted RBP8.68□□□□□ -1.02
CMTM4-205ENST00000581487 PEG3Q9GZU2 1588 aa8.68□□□□□ -1.02
CMTM4-205ENST00000581487 RSPH3Q86UC2 560 aa8.68□□□□□ -1.02
CMTM4-205ENST00000581487 TRIM27P14373 513 aa8.68□□□□□ -1.02
CMTM4-205ENST00000581487 SYCE3A1L190 88 aa8.68□□□□□ -1.02
CMTM4-205ENST00000581487 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
CMTM4-205ENST00000581487 GPRASP1Q5JY77 1395 aa8.68□□□□□ -1.02
CMTM4-205ENST00000581487 SART3Q15020 963 aaKnown RBP8.68□□□□□ -1.02
CMTM4-205ENST00000581487 ALDH1L2Q3SY69 923 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms