RNA–Protein interactions for RNA: ENST00000578411.1

SSH2-207, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 2

Gene SSH2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-207ENST00000578411 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
SSH2-207ENST00000578411 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
SSH2-207ENST00000578411 C5P01031 1676 aa17.41■□□□□ 0.38
SSH2-207ENST00000578411 COL13A1Q5TAT6 717 aaPredicted RBP17.4■□□□□ 0.38
SSH2-207ENST00000578411 DNAJC5GQ8N7S2 189 aa17.4■□□□□ 0.38
SSH2-207ENST00000578411 TTC21BQ7Z4L5 1316 aa17.4■□□□□ 0.38
SSH2-207ENST00000578411 FAM208AQ9UK61 1670 aaKnown RBP17.39■□□□□ 0.37
SSH2-207ENST00000578411 COL23A1Q86Y22 540 aaPredicted RBP17.39■□□□□ 0.37
SSH2-207ENST00000578411 TTC21AQ8NDW8 1320 aa17.39■□□□□ 0.37
SSH2-207ENST00000578411 NSD2O96028 1365 aa17.39■□□□□ 0.37
SSH2-207ENST00000578411 ANKRD36BQ8N2N9 1353 aa17.39■□□□□ 0.37
SSH2-207ENST00000578411 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
SSH2-207ENST00000578411 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
SSH2-207ENST00000578411 CCNL1Q9UK58 526 aaPredicted RBP17.37■□□□□ 0.37
SSH2-207ENST00000578411 PRELPP51888 382 aa17.36■□□□□ 0.37
SSH2-207ENST00000578411 TNS4Q8IZW8 715 aa17.36■□□□□ 0.37
SSH2-207ENST00000578411 IGSF1Q8N6C5 1336 aa17.36■□□□□ 0.37
SSH2-207ENST00000578411 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
SSH2-207ENST00000578411 WWC3Q9ULE0 1092 aa17.35■□□□□ 0.37
SSH2-207ENST00000578411 TOMM70O94826 608 aa17.34■□□□□ 0.37
SSH2-207ENST00000578411 DDX54Q8TDD1 881 aaKnown RBP17.34■□□□□ 0.37
SSH2-207ENST00000578411 NBPF1Q3BBV0 1214 aa17.33■□□□□ 0.36
SSH2-207ENST00000578411 ANKRD24Q8TF21 1146 aa17.33■□□□□ 0.36
SSH2-207ENST00000578411 PRIM1P49642 420 aaKnown RBP17.32■□□□□ 0.36
SSH2-207ENST00000578411 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
SSH2-207ENST00000578411 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
SSH2-207ENST00000578411 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
SSH2-207ENST00000578411 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
SSH2-207ENST00000578411 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
SSH2-207ENST00000578411 KLRG1Q96E93 195 aa17.31■□□□□ 0.36
SSH2-207ENST00000578411 USP47Q96K76 1375 aa17.3■□□□□ 0.36
SSH2-207ENST00000578411 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
SSH2-207ENST00000578411 USP31Q70CQ4 1352 aa17.29■□□□□ 0.36
SSH2-207ENST00000578411 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
SSH2-207ENST00000578411 HTRA3P83110 453 aa17.27■□□□□ 0.36
SSH2-207ENST00000578411 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
SSH2-207ENST00000578411 NMRK2Q9NPI5 230 aa17.26■□□□□ 0.35
SSH2-207ENST00000578411 KIAA1551Q9HCM1 1747 aa17.26■□□□□ 0.35
SSH2-207ENST00000578411 UBR3Q6ZT12 1888 aa17.26■□□□□ 0.35
SSH2-207ENST00000578411 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
SSH2-207ENST00000578411 MEGF6O75095 1541 aa17.25■□□□□ 0.35
SSH2-207ENST00000578411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
SSH2-207ENST00000578411 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
SSH2-207ENST00000578411 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
SSH2-207ENST00000578411 PXDNLA1KZ92 1463 aa17.23■□□□□ 0.35
SSH2-207ENST00000578411 RGPD2P0DJD1 1756 aa17.23■□□□□ 0.35
SSH2-207ENST00000578411 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
SSH2-207ENST00000578411 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
SSH2-207ENST00000578411 SLC34A2O95436 690 aa17.22■□□□□ 0.35
SSH2-207ENST00000578411 NME9Q86XW9 330 aa17.22■□□□□ 0.35
SSH2-207ENST00000578411 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
SSH2-207ENST00000578411 N4BP2Q86UW6 1770 aaPredicted RBP17.21■□□□□ 0.35
SSH2-207ENST00000578411 SBNO2Q9Y2G9 1366 aa17.21■□□□□ 0.35
SSH2-207ENST00000578411 C16orf71Q8IYS4 520 aaPredicted RBP17.21■□□□□ 0.35
SSH2-207ENST00000578411 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
SSH2-207ENST00000578411 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
SSH2-207ENST00000578411 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
SSH2-207ENST00000578411 FSTL1Q12841 308 aa17.2■□□□□ 0.34
SSH2-207ENST00000578411 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
SSH2-207ENST00000578411 AK7Q96M32 723 aa17.2■□□□□ 0.34
SSH2-207ENST00000578411 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
SSH2-207ENST00000578411 PHF14O94880 888 aa17.19■□□□□ 0.34
SSH2-207ENST00000578411 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
SSH2-207ENST00000578411 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
SSH2-207ENST00000578411 BRCA1P38398 1863 aaKnown RBP17.17■□□□□ 0.34
SSH2-207ENST00000578411 C10orf71Q711Q0 1435 aa17.17■□□□□ 0.34
SSH2-207ENST00000578411 IP6K1Q92551 441 aa17.17■□□□□ 0.34
SSH2-207ENST00000578411 PCNTO95613 3336 aa17.17■□□□□ 0.34
SSH2-207ENST00000578411 KCPQ6ZWJ8 1503 aa17.16■□□□□ 0.34
SSH2-207ENST00000578411 EDC4Q6P2E9 1401 aaKnown RBP17.16■□□□□ 0.34
SSH2-207ENST00000578411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.16■□□□□ 0.34
SSH2-207ENST00000578411 HSPA1AP0DMV8 641 aaKnown RBP17.15■□□□□ 0.34
SSH2-207ENST00000578411 HSPA1BP0DMV9 641 aaKnown RBP17.15■□□□□ 0.34
SSH2-207ENST00000578411 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
SSH2-207ENST00000578411 ITGB4P16144 1822 aa17.14■□□□□ 0.33
SSH2-207ENST00000578411 ARFGEF1Q9Y6D6 1849 aa17.14■□□□□ 0.33
SSH2-207ENST00000578411 SSFA2P28290 1259 aa17.13■□□□□ 0.33
SSH2-207ENST00000578411 ARHGAP27Q6ZUM4 889 aa17.13■□□□□ 0.33
SSH2-207ENST00000578411 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
SSH2-207ENST00000578411 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
SSH2-207ENST00000578411 MAP2P11137 1827 aaKnown RBP17.12■□□□□ 0.33
SSH2-207ENST00000578411 MMP10P09238 476 aa17.1■□□□□ 0.33
SSH2-207ENST00000578411 C9orf131Q5VYM1 1079 aa17.1■□□□□ 0.33
SSH2-207ENST00000578411 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
SSH2-207ENST00000578411 PCDH11XQ9BZA7 1347 aa17.1■□□□□ 0.33
SSH2-207ENST00000578411 PCDH11YQ9BZA8 1340 aa17.1■□□□□ 0.33
SSH2-207ENST00000578411 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
SSH2-207ENST00000578411 HOXC9P31274 260 aa17.09■□□□□ 0.33
SSH2-207ENST00000578411 TGFB2P61812 414 aa17.09■□□□□ 0.33
SSH2-207ENST00000578411 MPRIPQ6WCQ1 1025 aa17.09■□□□□ 0.33
SSH2-207ENST00000578411 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
SSH2-207ENST00000578411 SMC1BQ8NDV3 1235 aa17.09■□□□□ 0.33
SSH2-207ENST00000578411 MAP3K19Q56UN5 1328 aa17.09■□□□□ 0.33
SSH2-207ENST00000578411 A0A1W2PP64 1363 aa17.08■□□□□ 0.32
SSH2-207ENST00000578411 RTL1A6NKG5 1358 aa17.08■□□□□ 0.32
SSH2-207ENST00000578411 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
SSH2-207ENST00000578411 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
SSH2-207ENST00000578411 A0A0G2JLW4 131 aa17.07■□□□□ 0.32
SSH2-207ENST00000578411 FCHSD2O94868 740 aa17.07■□□□□ 0.32
SSH2-207ENST00000578411 SMG6Q86US8 1419 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms